| GenBank top hits | e value | %identity | Alignment |
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| KAA0040811.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 1.5e-18 | 37.5 | Show/hide |
Query: LMKAGSQGKYDSIEDENEGWTLVVRRKKQKQSYARKESRLFRDSKRKVKSQKKKGKKKSK--KSKPVVEESEDFFCPPQPITLVEYFPRRFLNDSQGEAL
+M + SQ K + IEDE E W +V +K+++ S + S + + S KKKG++ K KSKP+ + EDF P Q ITL E+FPR FL D E L
Subjt: LMKAGSQGKYDSIEDENEGWTLVVRRKKQKQSYARKESRLFRDSKRKVKSQKKKGKKKSK--KSKPVVEESEDFFCPPQPITLVEYFPRRFLNDSQGEAL
Query: ETVTCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLRIRPPVARALVFQRLSVNEMEEESTQPTNSSTRPSVFRRLSMPSEEEESTFSAPNVTRPST
E CH +VE D+ S S+ D RI+P R+ VFQRLS+ EEE+ PT++ TR S F+ LS+ + +++ RPST
Subjt: ETVTCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLRIRPPVARALVFQRLSVNEMEEESTQPTNSSTRPSVFRRLSMPSEEEESTFSAPNVTRPST
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| KAA0050143.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 2.5e-18 | 36.23 | Show/hide |
Query: MKAGSQGKYDSIEDENEGWTLVVRRKKQKQSYARKESRLFRDSKRKVKSQKKKGK--KKSKKSKPVVEESEDFFCPPQPITLVEYFPRRFLNDSQGEALE
M + S+ K + IEDE+E W ++ R+K ++ + + + + + S K KGK KK K +P+ + EDF P ITL E+FPR FL D E LE
Subjt: MKAGSQGKYDSIEDENEGWTLVVRRKKQKQSYARKESRLFRDSKRKVKSQKKKGK--KKSKKSKPVVEESEDFFCPPQPITLVEYFPRRFLNDSQGEALE
Query: TVTCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLRIRPPVARALVFQRLSVNEMEEESTQPTNSSTRPSVFRRLSMPSEEEESTFSAPNVTRPSTF
TCH V +VE D+ SS S+ D RI+P R+ VFQRLS+ EEE+ PT++STR S F+RLS+ + +++ +PST+
Subjt: TVTCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLRIRPPVARALVFQRLSVNEMEEESTQPTNSSTRPSVFRRLSMPSEEEESTFSAPNVTRPSTF
Query: QWLNVPM
+ + M
Subjt: QWLNVPM
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| KAA0062063.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.2e-17 | 35.14 | Show/hide |
Query: DQDERMAEME-------RKLNLLMKAGSQGKYDSIEDENEGWTLVVRRKKQKQSYARKESRLFRDSKRKVKSQKKKGK--KKSKKSKPVVEESEDFFCPP
DQ E + + E R +M SQ K + I+D+ + W +V R+K+++ ++ + +S + + S K KGK KK KSKP+ + +DF P
Subjt: DQDERMAEME-------RKLNLLMKAGSQGKYDSIEDENEGWTLVVRRKKQKQSYARKESRLFRDSKRKVKSQKKKGK--KKSKKSKPVVEESEDFFCPP
Query: QPITLVEYFPRRFLNDSQGEALETVTCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLRIRPPVARALVFQRLSVNEMEEESTQPTNSSTRPSVFRR
+ ITL E+FPR FL D+ E LE CH+V VVE D+ SS V ++ + RI+P R+ VFQRLS+ EEE+ P ++ST+ S F+R
Subjt: QPITLVEYFPRRFLNDSQGEALETVTCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLRIRPPVARALVFQRLSVNEMEEESTQPTNSSTRPSVFRR
Query: LSMPSEEEESTFSAPNVTRPST
LS+ + +++ RPST
Subjt: LSMPSEEEESTFSAPNVTRPST
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| KAA0062458.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 5.6e-18 | 34.73 | Show/hide |
Query: AGSQGKYDSIEDENEGWTLVVRRKKQKQSYARKESRLFRDSKRKVKSQKKKGK--KKSKKSKPVVEESEDFFCPPQPITLVEYFPRRFLNDSQGEALETV
+ SQ K + IEDE + W +V +K+++ S + +S + + KKKG+ KK +K K + + EDF P Q ITL E+ PRRFL D E LE
Subjt: AGSQGKYDSIEDENEGWTLVVRRKKQKQSYARKESRLFRDSKRKVKSQKKKGK--KKSKKSKPVVEESEDFFCPPQPITLVEYFPRRFLNDSQGEALETV
Query: TCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLRIRPPVARALVFQRLSVNEMEEESTQPTNSSTRPSVFRRLSMPSEEEESTFSAPNVTRPSTFQW
CH V +VE D+ SS SI D RI+P R+ VFQRLS+ EEE+ PT+ STR S F+RLS+ + +++ RPST
Subjt: TCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLRIRPPVARALVFQRLSVNEMEEESTQPTNSSTRPSVFRRLSMPSEEEESTFSAPNVTRPSTFQW
Query: LNVPMGREESTFSTPDVTRPSVFQRLSVTTRRDKKEQSA
SVF RL +T + ++E+ +
Subjt: LNVPMGREESTFSTPDVTRPSVFQRLSVTTRRDKKEQSA
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| TYK27425.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 5.6e-18 | 34.73 | Show/hide |
Query: AGSQGKYDSIEDENEGWTLVVRRKKQKQSYARKESRLFRDSKRKVKSQKKKGK--KKSKKSKPVVEESEDFFCPPQPITLVEYFPRRFLNDSQGEALETV
+ SQ K + IEDE + W +V +K+++ S + +S + + KKKG+ KK +K K + + EDF P Q ITL E+ PRRFL D E LE
Subjt: AGSQGKYDSIEDENEGWTLVVRRKKQKQSYARKESRLFRDSKRKVKSQKKKGK--KKSKKSKPVVEESEDFFCPPQPITLVEYFPRRFLNDSQGEALETV
Query: TCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLRIRPPVARALVFQRLSVNEMEEESTQPTNSSTRPSVFRRLSMPSEEEESTFSAPNVTRPSTFQW
CH V +VE D+ SS SI D RI+P R+ VFQRLS+ EEE+ PT+ STR S F+RLS+ + +++ RPST
Subjt: TCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLRIRPPVARALVFQRLSVNEMEEESTQPTNSSTRPSVFRRLSMPSEEEESTFSAPNVTRPSTFQW
Query: LNVPMGREESTFSTPDVTRPSVFQRLSVTTRRDKKEQSA
SVF RL +T + ++E+ +
Subjt: LNVPMGREESTFSTPDVTRPSVFQRLSVTTRRDKKEQSA
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TY01 Ty3-gypsy retrotransposon protein | 1.3e-17 | 38.75 | Show/hide |
Query: SQGKYDSIEDENEGWTLVVRRKKQKQSYARKESRLFRDSKRKVKSQKKKGKKKSKKSKPVVEESEDFFCPPQPITLVEYFPRRFLNDSQGEALETVTCHI
S K SIE++NEGW +V RR K+K + +KES +R+ +R+ K+QK K KKK++K K V EE +DF P + +T+ + FP RFL D Q E E +TCH
Subjt: SQGKYDSIEDENEGWTLVVRRKKQKQSYARKESRLFRDSKRKVKSQKKKGKKKSKKSKPVVEESEDFFCPPQPITLVEYFPRRFLNDSQGEALETVTCHI
Query: VDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLRIRPPVARALVFQRLSVNEMEEESTQPT
++ E++ +P+ S +LS F++ DLL + P + ++ L +N S+ PT
Subjt: VDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLRIRPPVARALVFQRLSVNEMEEESTQPT
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| A0A5A7U2K7 Retrotransposon gag protein | 1.2e-18 | 36.23 | Show/hide |
Query: MKAGSQGKYDSIEDENEGWTLVVRRKKQKQSYARKESRLFRDSKRKVKSQKKKGK--KKSKKSKPVVEESEDFFCPPQPITLVEYFPRRFLNDSQGEALE
M + S+ K + IEDE+E W ++ R+K ++ + + + + + S K KGK KK K +P+ + EDF P ITL E+FPR FL D E LE
Subjt: MKAGSQGKYDSIEDENEGWTLVVRRKKQKQSYARKESRLFRDSKRKVKSQKKKGK--KKSKKSKPVVEESEDFFCPPQPITLVEYFPRRFLNDSQGEALE
Query: TVTCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLRIRPPVARALVFQRLSVNEMEEESTQPTNSSTRPSVFRRLSMPSEEEESTFSAPNVTRPSTF
TCH V +VE D+ SS S+ D RI+P R+ VFQRLS+ EEE+ PT++STR S F+RLS+ + +++ +PST+
Subjt: TVTCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLRIRPPVARALVFQRLSVNEMEEESTQPTNSSTRPSVFRRLSMPSEEEESTFSAPNVTRPSTF
Query: QWLNVPM
+ + M
Subjt: QWLNVPM
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| A0A5A7V1P3 Ty3-gypsy retrotransposon protein | 6.0e-18 | 35.14 | Show/hide |
Query: DQDERMAEME-------RKLNLLMKAGSQGKYDSIEDENEGWTLVVRRKKQKQSYARKESRLFRDSKRKVKSQKKKGK--KKSKKSKPVVEESEDFFCPP
DQ E + + E R +M SQ K + I+D+ + W +V R+K+++ ++ + +S + + S K KGK KK KSKP+ + +DF P
Subjt: DQDERMAEME-------RKLNLLMKAGSQGKYDSIEDENEGWTLVVRRKKQKQSYARKESRLFRDSKRKVKSQKKKGK--KKSKKSKPVVEESEDFFCPP
Query: QPITLVEYFPRRFLNDSQGEALETVTCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLRIRPPVARALVFQRLSVNEMEEESTQPTNSSTRPSVFRR
+ ITL E+FPR FL D+ E LE CH+V VVE D+ SS V ++ + RI+P R+ VFQRLS+ EEE+ P ++ST+ S F+R
Subjt: QPITLVEYFPRRFLNDSQGEALETVTCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLRIRPPVARALVFQRLSVNEMEEESTQPTNSSTRPSVFRR
Query: LSMPSEEEESTFSAPNVTRPST
LS+ + +++ RPST
Subjt: LSMPSEEEESTFSAPNVTRPST
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| A0A5A7V4E9 Retrotransposon gag protein | 2.7e-18 | 34.73 | Show/hide |
Query: AGSQGKYDSIEDENEGWTLVVRRKKQKQSYARKESRLFRDSKRKVKSQKKKGK--KKSKKSKPVVEESEDFFCPPQPITLVEYFPRRFLNDSQGEALETV
+ SQ K + IEDE + W +V +K+++ S + +S + + KKKG+ KK +K K + + EDF P Q ITL E+ PRRFL D E LE
Subjt: AGSQGKYDSIEDENEGWTLVVRRKKQKQSYARKESRLFRDSKRKVKSQKKKGK--KKSKKSKPVVEESEDFFCPPQPITLVEYFPRRFLNDSQGEALETV
Query: TCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLRIRPPVARALVFQRLSVNEMEEESTQPTNSSTRPSVFRRLSMPSEEEESTFSAPNVTRPSTFQW
CH V +VE D+ SS SI D RI+P R+ VFQRLS+ EEE+ PT+ STR S F+RLS+ + +++ RPST
Subjt: TCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLRIRPPVARALVFQRLSVNEMEEESTQPTNSSTRPSVFRRLSMPSEEEESTFSAPNVTRPSTFQW
Query: LNVPMGREESTFSTPDVTRPSVFQRLSVTTRRDKKEQSA
SVF RL +T + ++E+ +
Subjt: LNVPMGREESTFSTPDVTRPSVFQRLSVTTRRDKKEQSA
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| A0A5D3DVW2 Retrotransposon gag protein | 2.7e-18 | 34.73 | Show/hide |
Query: AGSQGKYDSIEDENEGWTLVVRRKKQKQSYARKESRLFRDSKRKVKSQKKKGK--KKSKKSKPVVEESEDFFCPPQPITLVEYFPRRFLNDSQGEALETV
+ SQ K + IEDE + W +V +K+++ S + +S + + KKKG+ KK +K K + + EDF P Q ITL E+ PRRFL D E LE
Subjt: AGSQGKYDSIEDENEGWTLVVRRKKQKQSYARKESRLFRDSKRKVKSQKKKGK--KKSKKSKPVVEESEDFFCPPQPITLVEYFPRRFLNDSQGEALETV
Query: TCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLRIRPPVARALVFQRLSVNEMEEESTQPTNSSTRPSVFRRLSMPSEEEESTFSAPNVTRPSTFQW
CH V +VE D+ SS SI D RI+P R+ VFQRLS+ EEE+ PT+ STR S F+RLS+ + +++ RPST
Subjt: TCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLRIRPPVARALVFQRLSVNEMEEESTQPTNSSTRPSVFRRLSMPSEEEESTFSAPNVTRPSTFQW
Query: LNVPMGREESTFSTPDVTRPSVFQRLSVTTRRDKKEQSA
SVF RL +T + ++E+ +
Subjt: LNVPMGREESTFSTPDVTRPSVFQRLSVTTRRDKKEQSA
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