; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg028744 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028744
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionsquamosa promoter-binding-like protein 13A
Genome locationscaffold7:15070552..15077228
RNA-Seq ExpressionSpg028744
SyntenySpg028744
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR004333 - SBP domain
IPR036893 - SBP domain superfamily
IPR044817 - Squamosa promoter-binding-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042930.1 squamosa promoter-binding-like protein 13A [Cucumis melo var. makuwa]7.0e-3292.11Show/hide
Query:  DTDLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFI
        DTDL+N KDYHRRH+VCDSHSKT VVMVRGEEKRFCQQ SRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLF+
Subjt:  DTDLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFI

XP_004148013.1 squamosa promoter-binding-like protein 13A [Cucumis sativus]4.1e-3287.65Show/hide
Query:  DTDLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFIVQGIF
        DTDL+N KDYHRRH+VCDSHSKT VVMVRGEEKRFCQQ SRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLF+    F
Subjt:  DTDLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFIVQGIF

XP_008450118.1 PREDICTED: squamosa promoter-binding-like protein 13A [Cucumis melo]7.0e-3292.11Show/hide
Query:  DTDLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFI
        DTDL+N KDYHRRH+VCDSHSKT VVMVRGEEKRFCQQ SRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLF+
Subjt:  DTDLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFI

XP_022989683.1 squamosa promoter-binding-like protein 13A [Cucurbita maxima]5.9e-3190.79Show/hide
Query:  DTDLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFI
        D+DLSN K+YHRRH+VCD HSKT VVMVRGEEKRFCQQ SRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFI
Subjt:  DTDLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFI

XP_038877944.1 squamosa promoter-binding-like protein 13A [Benincasa hispida]1.6e-3190.79Show/hide
Query:  DTDLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFI
        DTDL+N KDYHRRH+VCDSHSKT VV+VRGEEKRFCQQ SRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLF+
Subjt:  DTDLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFI

TrEMBL top hitse value%identityAlignment
A0A0A0L895 SBP-type domain-containing protein2.0e-3287.65Show/hide
Query:  DTDLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFIVQGIF
        DTDL+N KDYHRRH+VCDSHSKT VVMVRGEEKRFCQQ SRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLF+    F
Subjt:  DTDLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFIVQGIF

A0A1S3BNK6 squamosa promoter-binding-like protein 13A3.4e-3292.11Show/hide
Query:  DTDLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFI
        DTDL+N KDYHRRH+VCDSHSKT VVMVRGEEKRFCQQ SRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLF+
Subjt:  DTDLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFI

A0A5D3C4M7 Squamosa promoter-binding-like protein 13A3.4e-3292.11Show/hide
Query:  DTDLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFI
        DTDL+N KDYHRRH+VCDSHSKT VVMVRGEEKRFCQQ SRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLF+
Subjt:  DTDLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFI

A0A6J1EL17 squamosa promoter-binding-like protein 13A2.9e-3190.79Show/hide
Query:  DTDLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFI
        D+DLSN K+YHRRH+VCD HSKT VVMVRGEEKRFCQQ SRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFI
Subjt:  DTDLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFI

A0A6J1JR21 squamosa promoter-binding-like protein 13A2.9e-3190.79Show/hide
Query:  DTDLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFI
        D+DLSN K+YHRRH+VCD HSKT VVMVRGEEKRFCQQ SRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFI
Subjt:  DTDLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFI

SwissProt top hitse value%identityAlignment
B9DI20 Squamosa promoter-binding-like protein 13A6.3e-2847.45Show/hide
Query:  DTDLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFIVQGIFSQIAKVLLGEISSGTPPFD
        D+D SN ++YH+RHKVCD HSKT VV + G ++RFCQQ SRFH+L EFDE KRSCRKRLDGHNRRRRKPQPE +      F+      L E S G+  F 
Subjt:  DTDLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFIVQGIFSQIAKVLLGEISSGTPPFD

Query:  L-----PRYNSEIRNVVVGLPNLEWENSREKILPKVP
              P + + + +V V      +  S+  ++   P
Subjt:  L-----PRYNSEIRNVVVGLPNLEWENSREKILPKVP

P0DI11 Squamosa promoter-binding-like protein 13B6.3e-2847.45Show/hide
Query:  DTDLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFIVQGIFSQIAKVLLGEISSGTPPFD
        D+D SN ++YH+RHKVCD HSKT VV + G ++RFCQQ SRFH+L EFDE KRSCRKRLDGHNRRRRKPQPE +      F+      L E S G+  F 
Subjt:  DTDLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFIVQGIFSQIAKVLLGEISSGTPPFD

Query:  L-----PRYNSEIRNVVVGLPNLEWENSREKILPKVP
              P + + + +V V      +  S+  ++   P
Subjt:  L-----PRYNSEIRNVVVGLPNLEWENSREKILPKVP

Q0J0K1 Squamosa promoter-binding-like protein 184.1e-2759.26Show/hide
Query:  DLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFIVQGIFSQIAKVLLGEISSGTPPFDLP
        DLS  +DYHRRHKVC+ HSKT VV+V G E RFCQQ SRFH LGEFDE KRSCRKRLDGHNRRRRKPQ +S+     + SQ         +S TPP   P
Subjt:  DLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFIVQGIFSQIAKVLLGEISSGTPPFDLP

Query:  RYNSEIRN
         +   I++
Subjt:  RYNSEIRN

Q49I57 Teosinte glume architecture 12.3e-2569.14Show/hide
Query:  DLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFIVQGIFSQ
        DL   +DYHRRHKVC++HSKT VV+V G E RFCQQ SRFH L EFD  KRSCRKRLDGHNRRRRKPQP+++     I SQ
Subjt:  DLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFIVQGIFSQ

Q6YZE8 Squamosa promoter-binding-like protein 165.9e-2659.41Show/hide
Query:  DLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFIVQGIFSQIAKVLLGEISSGTPPFDLP
        DLS  +DYHRRHKVC++HSKT +V+V G E RFCQQ SRFH L EFDE KRSCRKRLDGHNRRRRKPQP+ +          A  L  +  +   PF  P
Subjt:  DLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFIVQGIFSQIAKVLLGEISSGTPPFDLP

Query:  R
        R
Subjt:  R

Arabidopsis top hitse value%identityAlignment
AT1G69170.1 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein1.1e-2271.64Show/hide
Query:  DLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKP
        DLS+ KDYH+RH+VC++HSKT VV+V G E+RFCQQ SRFH L EFD+ KRSCR+RL GHN RRRKP
Subjt:  DLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKP

AT1G76580.1 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein1.4e-2268.06Show/hide
Query:  DLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESL
        DLS  KDYHRRHKVC+ HSK    +V  + +RFCQQ SRFH L EFDE KRSCR+RLDGHNRRRRK QP+++
Subjt:  DLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESL

AT5G50570.1 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein4.5e-2947.45Show/hide
Query:  DTDLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFIVQGIFSQIAKVLLGEISSGTPPFD
        D+D SN ++YH+RHKVCD HSKT VV + G ++RFCQQ SRFH+L EFDE KRSCRKRLDGHNRRRRKPQPE +      F+      L E S G+  F 
Subjt:  DTDLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFIVQGIFSQIAKVLLGEISSGTPPFD

Query:  L-----PRYNSEIRNVVVGLPNLEWENSREKILPKVP
              P + + + +V V      +  S+  ++   P
Subjt:  L-----PRYNSEIRNVVVGLPNLEWENSREKILPKVP

AT5G50570.2 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein4.5e-2947.45Show/hide
Query:  DTDLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFIVQGIFSQIAKVLLGEISSGTPPFD
        D+D SN ++YH+RHKVCD HSKT VV + G ++RFCQQ SRFH+L EFDE KRSCRKRLDGHNRRRRKPQPE +      F+      L E S G+  F 
Subjt:  DTDLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFIVQGIFSQIAKVLLGEISSGTPPFD

Query:  L-----PRYNSEIRNVVVGLPNLEWENSREKILPKVP
              P + + + +V V      +  S+  ++   P
Subjt:  L-----PRYNSEIRNVVVGLPNLEWENSREKILPKVP

AT5G50670.1 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein4.5e-2947.45Show/hide
Query:  DTDLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFIVQGIFSQIAKVLLGEISSGTPPFD
        D+D SN ++YH+RHKVCD HSKT VV + G ++RFCQQ SRFH+L EFDE KRSCRKRLDGHNRRRRKPQPE +      F+      L E S G+  F 
Subjt:  DTDLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFIVQGIFSQIAKVLLGEISSGTPPFD

Query:  L-----PRYNSEIRNVVVGLPNLEWENSREKILPKVP
              P + + + +V V      +  S+  ++   P
Subjt:  L-----PRYNSEIRNVVVGLPNLEWENSREKILPKVP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACAGAGCATCTTTGGTACTCTTTTGCTCTGTTTCTCCTCATTGATTTCTTTCTTCAAAATACCATATTTTGACACTGACTTGAGCAATTTCAAGGATTATCATCG
GCGCCATAAGGTCTGCGATTCGCACTCAAAAACCCTTGTTGTGATGGTGAGGGGCGAGGAGAAGCGATTCTGTCAACAGCGCAGCAGGTTCCATTCGCTTGGTGAGTTTG
ATGAGGTGAAGAGGAGTTGTAGAAAGAGGCTTGATGGGCACAATCGGCGTAGGAGGAAGCCTCAGCCTGAATCCTTGTTTATAGTTCAAGGGATTTTCTCTCAAATTGCA
AAGGTGTTACTGGGAGAGATTAGCAGCGGAACACCACCATTTGATCTTCCCCGCTATAACTCTGAGATTAGGAACGTAGTTGTGGGACTACCTAATCTTGAATGGGAAAA
CTCTAGAGAGAAAATTCTCCCTAAAGTTCCTGAGTTGAGAGAATATGAGAGGGAGGCTAGAGAGAATGCAAGAGTGCATTCTTGTGGCCTTATGTTGTTGTACTTAAACC
CTAGGTTTAGTGTTCTATTTATAGGAGAAATGCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCACAGAGCATCTTTGGTACTCTTTTGCTCTGTTTCTCCTCATTGATTTCTTTCTTCAAAATACCATATTTTGACACTGACTTGAGCAATTTCAAGGATTATCATCG
GCGCCATAAGGTCTGCGATTCGCACTCAAAAACCCTTGTTGTGATGGTGAGGGGCGAGGAGAAGCGATTCTGTCAACAGCGCAGCAGGTTCCATTCGCTTGGTGAGTTTG
ATGAGGTGAAGAGGAGTTGTAGAAAGAGGCTTGATGGGCACAATCGGCGTAGGAGGAAGCCTCAGCCTGAATCCTTGTTTATAGTTCAAGGGATTTTCTCTCAAATTGCA
AAGGTGTTACTGGGAGAGATTAGCAGCGGAACACCACCATTTGATCTTCCCCGCTATAACTCTGAGATTAGGAACGTAGTTGTGGGACTACCTAATCTTGAATGGGAAAA
CTCTAGAGAGAAAATTCTCCCTAAAGTTCCTGAGTTGAGAGAATATGAGAGGGAGGCTAGAGAGAATGCAAGAGTGCATTCTTGTGGCCTTATGTTGTTGTACTTAAACC
CTAGGTTTAGTGTTCTATTTATAGGAGAAATGCCATGA
Protein sequenceShow/hide protein sequence
MPQSIFGTLLLCFSSLISFFKIPYFDTDLSNFKDYHRRHKVCDSHSKTLVVMVRGEEKRFCQQRSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFIVQGIFSQIA
KVLLGEISSGTPPFDLPRYNSEIRNVVVGLPNLEWENSREKILPKVPELREYEREARENARVHSCGLMLLYLNPRFSVLFIGEMP