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Spg028768 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028768
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold7:11777959..11778351
RNA-Seq ExpressionSpg028768
SyntenySpg028768
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599936.1 hypothetical protein SDJN03_05169, partial [Cucurbita argyrosperma subsp. sororia]2.7e-4081.67Show/hide
Query:  PSAVVFPKF---SAISPPWLRHQTAAAAPRCVSQSSRGSSVAELERELAAEGEEWLKLGRLEEKC-SGGKGVVELLECLEREAIMGEDEGREPTDYNRRA
        PSAVVFPKF   S ISPPWLR Q  AAAPRCVS    GSSVAELEREL+ EGEEWLKLGRLEEKC SGGKG+VELLE LEREAIM EDEGR+PTDY+RRA
Subjt:  PSAVVFPKF---SAISPPWLRHQTAAAAPRCVSQSSRGSSVAELERELAAEGEEWLKLGRLEEKC-SGGKGVVELLECLEREAIMGEDEGREPTDYNRRA

Query:  KIFSTSSRVFQALKQQSEEE
        KIFSTSSRVFQALKQ S++E
Subjt:  KIFSTSSRVFQALKQQSEEE

KAG7030615.1 hypothetical protein SDJN02_04652, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-4080.83Show/hide
Query:  PSAVVFPKF---SAISPPWLRHQTAAAAPRCVSQSSRGSSVAELERELAAEGEEWLKLGRLEEKC-SGGKGVVELLECLEREAIMGEDEGREPTDYNRRA
        PSAVVFPKF   S +SPPWLR Q  AAAPRCVS    GSSV ELEREL+ EGEEWLKLGRLEEKC SGGKG+VELLE LEREAIMGEDEGR+PTDY+RRA
Subjt:  PSAVVFPKF---SAISPPWLRHQTAAAAPRCVSQSSRGSSVAELERELAAEGEEWLKLGRLEEKC-SGGKGVVELLECLEREAIMGEDEGREPTDYNRRA

Query:  KIFSTSSRVFQALKQQSEEE
        KIFSTSSRVFQALKQ S++E
Subjt:  KIFSTSSRVFQALKQQSEEE

XP_022941969.1 uncharacterized protein LOC111447176 [Cucurbita moschata]8.4e-4282.5Show/hide
Query:  PSAVVFPKF---SAISPPWLRHQTAAAAPRCVSQSSRGSSVAELERELAAEGEEWLKLGRLEEKC-SGGKGVVELLECLEREAIMGEDEGREPTDYNRRA
        PSAVVFPKF   S +SPPWLR Q  AAAPRCVSQ   GSSVAELEREL+ EGEEWLKLGRLEEKC SGGKG+VELLE LEREAIMGEDEGR+PTDY+RRA
Subjt:  PSAVVFPKF---SAISPPWLRHQTAAAAPRCVSQSSRGSSVAELERELAAEGEEWLKLGRLEEKC-SGGKGVVELLECLEREAIMGEDEGREPTDYNRRA

Query:  KIFSTSSRVFQALKQQSEEE
        KIFSTSSRVFQALKQ S++E
Subjt:  KIFSTSSRVFQALKQQSEEE

XP_023541783.1 uncharacterized protein LOC111801831 [Cucurbita pepo subsp. pepo]6.0e-4079.17Show/hide
Query:  PSAVVFPKF---SAISPPWLRHQTAAAAPRCVSQSSRGSSVAELERELAAEGEEWLKLGRLEEKC-SGGKGVVELLECLEREAIMGEDEGREPTDYNRRA
        PSAVVFPKF   S +SPPWLR Q   AAPRCVSQ   GSSVAELERE + EGEEWLKLGRLEEKC SGGKG+VELLE LEREAIMGEDEGR+PT+Y+RRA
Subjt:  PSAVVFPKF---SAISPPWLRHQTAAAAPRCVSQSSRGSSVAELERELAAEGEEWLKLGRLEEKC-SGGKGVVELLECLEREAIMGEDEGREPTDYNRRA

Query:  KIFSTSSRVFQALKQQSEEE
        KIFSTSSRVFQALK+ S++E
Subjt:  KIFSTSSRVFQALKQQSEEE

XP_038892559.1 uncharacterized protein LOC120081603 [Benincasa hispida]3.7e-3768.61Show/hide
Query:  MQVSASLLNPPPP------PSAVVFPKF---SAISPPWLRHQTAAAAPRCVSQSSRGSSVAELERELAAEGEEWLKLGRLEEKC-SGGKGVVELLECLER
        MQVSASL+ PPPP      PS  VFPKF     IS PWLRH+  A  PRCVSQ   G SVAEL+       EEWLK G+LEEKC  GGKGVVELLECLE+
Subjt:  MQVSASLLNPPPP------PSAVVFPKF---SAISPPWLRHQTAAAAPRCVSQSSRGSSVAELERELAAEGEEWLKLGRLEEKC-SGGKGVVELLECLER

Query:  EAIMGEDEGREPTDYNRRAKIFSTSSRVFQALKQQSE
        EAIMGEDEG++PTDYNRRAKIFSTSS+VFQALKQ S+
Subjt:  EAIMGEDEGREPTDYNRRAKIFSTSSRVFQALKQQSE

TrEMBL top hitse value%identityAlignment
A0A5D3DSR0 Uncharacterized protein8.2e-3568.15Show/hide
Query:  MQVSASLLNPPP--PPSAVVFPKF---SAISPPWLRHQTAAAA--PRCVSQSSRGSSVAELERELAAEGEEWLKLGRLEEKC-SGGKGVVELLECLEREA
        MQ+SASL+ PPP   PS   FPK     A+S PWL H+ A A   PRCVSQ   G+SVAE++       EEWLKLGRLEEKC SGGKG+VELLECLE+EA
Subjt:  MQVSASLLNPPP--PPSAVVFPKF---SAISPPWLRHQTAAAA--PRCVSQSSRGSSVAELERELAAEGEEWLKLGRLEEKC-SGGKGVVELLECLEREA

Query:  IMGEDEGREPTDYNRRAKIFSTSSRVFQALKQQSE
        IMGEDEGREPTDYNRRAKIFSTSS VFQALKQ  +
Subjt:  IMGEDEGREPTDYNRRAKIFSTSSRVFQALKQQSE

A0A6J1D0H7 uncharacterized protein LOC1110159268.8e-3770.9Show/hide
Query:  MQVSASL-LNPPPP-----PSAVVFPKFSAISPPWLRHQTAAAAPRCVSQSSRGSSVAELERELAAEGEEWLKLGRLEEKCSGGKGVVELLECLEREAIM
        M+VS+   L PPPP     PSAV F   SAISP W R  TA+   RCVSQ   GS  AELERE+AAEGEEWLKLGRL+EKC GGKGVVELLECLE EAIM
Subjt:  MQVSASL-LNPPPP-----PSAVVFPKFSAISPPWLRHQTAAAAPRCVSQSSRGSSVAELERELAAEGEEWLKLGRLEEKCSGGKGVVELLECLEREAIM

Query:  GEDEGREPTDYNRRAKIFSTSSRVFQALKQQSEE
        GEDEGR+P DY+RRAKIFSTSS+VFQALKQQ+ +
Subjt:  GEDEGREPTDYNRRAKIFSTSSRVFQALKQQSEE

A0A6J1FPZ7 uncharacterized protein LOC1114471764.1e-4282.5Show/hide
Query:  PSAVVFPKF---SAISPPWLRHQTAAAAPRCVSQSSRGSSVAELERELAAEGEEWLKLGRLEEKC-SGGKGVVELLECLEREAIMGEDEGREPTDYNRRA
        PSAVVFPKF   S +SPPWLR Q  AAAPRCVSQ   GSSVAELEREL+ EGEEWLKLGRLEEKC SGGKG+VELLE LEREAIMGEDEGR+PTDY+RRA
Subjt:  PSAVVFPKF---SAISPPWLRHQTAAAAPRCVSQSSRGSSVAELERELAAEGEEWLKLGRLEEKC-SGGKGVVELLECLEREAIMGEDEGREPTDYNRRA

Query:  KIFSTSSRVFQALKQQSEEE
        KIFSTSSRVFQALKQ S++E
Subjt:  KIFSTSSRVFQALKQQSEEE

A0A6J1FW01 uncharacterized protein LOC1114478171.2e-3672.59Show/hide
Query:  VSASLLNPPPPP------SAVVFPK---FSAISPPWLRHQTAAAAPRCVSQSSRGSSVAELERELAAEGEEWLKLGRLEEKC-SGGKGVVELLECLEREA
        VSASL+ PPP P      S VVF K    SAISP WL  + AAAAPRCVSQ   G SVAE       E EEWLKLGRLEEKC  GGKGVVELLECLEREA
Subjt:  VSASLLNPPPPP------SAVVFPK---FSAISPPWLRHQTAAAAPRCVSQSSRGSSVAELERELAAEGEEWLKLGRLEEKC-SGGKGVVELLECLEREA

Query:  IMGEDEGREPTDYNRRAKIFSTSSRVFQALKQQSE
        IMGEDEGREPTDYNRRAKIFSTSS VFQALKQ S+
Subjt:  IMGEDEGREPTDYNRRAKIFSTSSRVFQALKQQSE

A0A6J1JM89 uncharacterized protein LOC1114859331.8e-3772.59Show/hide
Query:  VSASLLNPPPPP------SAVVFPK---FSAISPPWLRHQTAAAAPRCVSQSSRGSSVAELERELAAEGEEWLKLGRLEEKC-SGGKGVVELLECLEREA
        VSASL+ PPP P      S VVFPK    SAISPPW   + AAAAPRCVSQ   G SVAE       E EEWLKLGRL+EKC  GGKGVVELLECLEREA
Subjt:  VSASLLNPPPPP------SAVVFPK---FSAISPPWLRHQTAAAAPRCVSQSSRGSSVAELERELAAEGEEWLKLGRLEEKC-SGGKGVVELLECLEREA

Query:  IMGEDEGREPTDYNRRAKIFSTSSRVFQALKQQSE
        IMGEDEGREPTDYNRRAKIFSTSS VFQALKQ S+
Subjt:  IMGEDEGREPTDYNRRAKIFSTSSRVFQALKQQSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G05220.1 unknown protein3.6e-1448.94Show/hide
Query:  AAPRCVSQSSRGSSVAELERELAAEGEEWLKLGRLEEKCSG--GKGVVELLECLEREAIMGEDEGREPTDYNRRAKIFSTSSRVFQALKQQSEE
        AA RCV+    GS  A     +  E EE  +L +    C G   +GV ELLECLE+EAIMG D+GR+P DYNRRAKIF  SS++F+ L +Q ++
Subjt:  AAPRCVSQSSRGSSVAELERELAAEGEEWLKLGRLEEKCSG--GKGVVELLECLEREAIMGEDEGREPTDYNRRAKIFSTSSRVFQALKQQSEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGTCTCTGCATCTCTTCTAAACCCGCCACCGCCACCCTCCGCCGTCGTCTTCCCGAAATTCTCAGCCATTTCCCCACCATGGCTCCGCCATCAGACTGCGGCGGC
AGCGCCAAGATGTGTTAGTCAGAGCAGCCGAGGGAGCTCTGTGGCGGAGCTGGAGAGGGAGCTGGCGGCTGAGGGAGAAGAGTGGCTGAAGCTAGGGAGGCTGGAGGAGA
AGTGCAGCGGCGGAAAGGGAGTGGTGGAGCTGCTGGAATGTCTGGAAAGAGAAGCCATCATGGGAGAAGATGAAGGAAGAGAGCCTACTGATTACAACAGGAGGGCCAAG
ATTTTCAGTACAAGTTCCAGAGTTTTTCAAGCTCTCAAGCAACAATCTGAAGAAGAACAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGTCTCTGCATCTCTTCTAAACCCGCCACCGCCACCCTCCGCCGTCGTCTTCCCGAAATTCTCAGCCATTTCCCCACCATGGCTCCGCCATCAGACTGCGGCGGC
AGCGCCAAGATGTGTTAGTCAGAGCAGCCGAGGGAGCTCTGTGGCGGAGCTGGAGAGGGAGCTGGCGGCTGAGGGAGAAGAGTGGCTGAAGCTAGGGAGGCTGGAGGAGA
AGTGCAGCGGCGGAAAGGGAGTGGTGGAGCTGCTGGAATGTCTGGAAAGAGAAGCCATCATGGGAGAAGATGAAGGAAGAGAGCCTACTGATTACAACAGGAGGGCCAAG
ATTTTCAGTACAAGTTCCAGAGTTTTTCAAGCTCTCAAGCAACAATCTGAAGAAGAACAATGA
Protein sequenceShow/hide protein sequence
MQVSASLLNPPPPPSAVVFPKFSAISPPWLRHQTAAAAPRCVSQSSRGSSVAELERELAAEGEEWLKLGRLEEKCSGGKGVVELLECLEREAIMGEDEGREPTDYNRRAK
IFSTSSRVFQALKQQSEEEQ