; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg028778 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028778
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold7:13811597..13815239
RNA-Seq ExpressionSpg028778
SyntenySpg028778
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043405.1 hypothetical protein E6C27_scaffold1639G00040 [Cucumis melo var. makuwa]4.8e-3446.31Show/hide
Query:  ARKEVVEDVKACDLKKGETSTSLVKPKVVEDEKCSP--VLRYVPLSRRKKGESPFTECPKSIK-------------KKLLKEGYSLPTTRKGLGYKSPEP
        A KE  + +     +KGE STS  K  ++ DEK S   +LRYVPLSRR+KGESPF + P+ +K             KKLL+EG+ +P +RKG GYKSPEP
Subjt:  ARKEVVEDVKACDLKKGETSTSLVKPKVVEDEKCSP--VLRYVPLSRRKKGESPFTECPKSIK-------------KKLLKEGYSLPTTRKGLGYKSPEP

Query:  VRITRKGKANVADINHITVEEVDDSKEEESVDQRASVFRRIRPPVARASVFQRIIVNEIEKESAQLTNSSTRSSVFRRLSMPAGEEESTLSTPDVTRPSA
        + I RK K  V D NHITV EVD  +E+E   QR S F +IRP V R +VF+R+ V + E++  Q T+S  + S  +RL+M   +E+ T      TRPSA
Subjt:  VRITRKGKANVADINHITVEEVDDSKEEESVDQRASVFRRIRPPVARASVFQRIIVNEIEKESAQLTNSSTRSSVFRRLSMPAGEEESTLSTPDVTRPSA

Query:  FRR
        F R
Subjt:  FRR

KAA0055957.1 uncharacterized protein E6C27_scaffold319G00830 [Cucumis melo var. makuwa]4.3e-3542.92Show/hide
Query:  ARKEVVEDVKACDLKKGETSTSLVKPKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPKSIK-------------------------------------
        A KE  + +      K E ST+  K  ++ DEK S  P+LRYVPLSRRKKGESPF E P+ +K                                     
Subjt:  ARKEVVEDVKACDLKKGETSTSLVKPKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPKSIK-------------------------------------

Query:  ------KKLLKEGYSLPTTRKGLGYKSPEPVRITRKGKANVADINHITVEEVDDSKEEESVDQRASVFRRIRPPVARASVFQRIIVNEIEKESAQLTNSS
              KKLL+EG+ +P +RKGLGYKSPEP+RITRKGK  V D NHITV+EVD  +E+E  +QR S F RI P VARA VF+R+ + E +++  Q T++ 
Subjt:  ------KKLLKEGYSLPTTRKGLGYKSPEPVRITRKGKANVADINHITVEEVDDSKEEESVDQRASVFRRIRPPVARASVFQRIIVNEIEKESAQLTNSS

Query:  TRSSVFRRLSMPAGEEESTLSTPDVTRPSAFRR
         R S F+RL++   EE+    T   T+PSAF R
Subjt:  TRSSVFRRLSMPAGEEESTLSTPDVTRPSAFRR

TYK28162.1 uncharacterized protein E5676_scaffold289G00760 [Cucumis melo var. makuwa]4.8e-3441.15Show/hide
Query:  ARKEVVEDVKACDLKKGETSTSLVKPKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPKSIK-------------------------------------
        A KE  + +      K E ST+  K  ++ DEK S  P+LRYVPLSRRKKGESPF E P+ +K                                     
Subjt:  ARKEVVEDVKACDLKKGETSTSLVKPKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPKSIK-------------------------------------

Query:  ----------------KKLLKEGYSLPTTRKGLGYKSPEPVRITRKGKANVADINHITVEEVDDSKEEESVDQRASVFRRIRPPVARASVFQRIIVNEIE
                        KKLL+EG+ +P +RKGLGYKSPEP+RITRKGK  V D NHITV+EVD  +E+E  +QR S F RI P VARA VF+R+ + E E
Subjt:  ----------------KKLLKEGYSLPTTRKGLGYKSPEPVRITRKGKANVADINHITVEEVDDSKEEESVDQRASVFRRIRPPVARASVFQRIIVNEIE

Query:  KESAQLTNSSTRSSVFRRLSMPAGEEESTLSTPDVTRPSAFRR
        ++  Q T++  + S F+RL++   EE+    T   T+PSAF R
Subjt:  KESAQLTNSSTRSSVFRRLSMPAGEEESTLSTPDVTRPSAFRR

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]4.0e-3336.99Show/hide
Query:  VDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLSLPQEAKKPQAD--------ARKEVVEDVKACDLKKGETSTSLVKPKVVEDEKC--SPVLRYVPLSRR
        V  VE D  P S + +        S +   L  LP E    + +        A  E  E  +  +  KGE  TS  K  +++DE    +PVLRYVPLSRR
Subjt:  VDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLSLPQEAKKPQAD--------ARKEVVEDVKACDLKKGETSTSLVKPKVVEDEKC--SPVLRYVPLSRR

Query:  KKGESPFTECPKSIK-----------------------------------------------------------------------------KKLLKEGY
        KKGESPF E PK +K                                                                             KKLL+EG+
Subjt:  KKGESPFTECPKSIK-----------------------------------------------------------------------------KKLLKEGY

Query:  SLPTTRKGLGYKSPEPVRITRKGKANVADINHITVEEVDDSKEEESVDQRASVFRRIRPPVARASVFQRIIVNEIEKESAQLTNSSTRSSVFRRLSMPAG
        S+P +RKGLGYKSPEP+RIT+KGK  V DINHIT+EE D++  +E  +QR SVF RIRP VAR  VF+R+ + E E+E  Q   S  R SVFRRL+    
Subjt:  SLPTTRKGLGYKSPEPVRITRKGKANVADINHITVEEVDDSKEEESVDQRASVFRRIRPPVARASVFQRIIVNEIEKESAQLTNSSTRSSVFRRLSMPAG

Query:  EEESTLSTPDVTRPSAFRR
        +EEST      TRPSAF R
Subjt:  EEESTLSTPDVTRPSAFRR

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]7.6e-1653.85Show/hide
Query:  AVASRISKLIEESSKDKVAVKDNPLFESVVPTSKQPKDALNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQNRETAESKYFPRC
        A+A  I K + ES K  + +K+NPL+      S +     +PDVMSVMMADV  +  MAEMERK+NLLMK VDERD EIA LK Q+Q RETAES   P  
Subjt:  AVASRISKLIEESSKDKVAVKDNPLFESVVPTSKQPKDALNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQNRETAESKYFPRC

Query:  FLDD
         +DD
Subjt:  FLDD

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]6.9e-3340.48Show/hide
Query:  KGETSTSLVKPKVVEDEKC--SPVLRYVPLSRRKKGESPFTECPKSIK----------------------------------------------------
        KGE  TS  K  ++++E    +PVLRYVPLSRRKKGESPF E PK +K                                                    
Subjt:  KGETSTSLVKPKVVEDEKC--SPVLRYVPLSRRKKGESPFTECPKSIK----------------------------------------------------

Query:  -------------------------KKLLKEGYSLPTTRKGLGYKSPEPVRITRKGKANVADINHITVEEVDDSKEEESVDQRASVFRRIRPPVARASVF
                                 KKLL+EG+S+P +RKGLGYKSPEP+RIT+KGK  V DINHIT+EE D++  +E  +QR SVF RIRP VAR  VF
Subjt:  -------------------------KKLLKEGYSLPTTRKGLGYKSPEPVRITRKGKANVADINHITVEEVDDSKEEESVDQRASVFRRIRPPVARASVF

Query:  QRIIVNEIEKESAQLTNSSTRSSVFRRLSMPAGEEESTLSTPDVTRPSAFRR
        +R+ + E E+E  Q   +  R SVFRRL+    +EEST      TRPSAF R
Subjt:  QRIIVNEIEKESAQLTNSSTRSSVFRRLSMPAGEEESTLSTPDVTRPSAFRR

TrEMBL top hitse value%identityAlignment
A0A5A7TPR5 RNase H domain-containing protein2.3e-3446.31Show/hide
Query:  ARKEVVEDVKACDLKKGETSTSLVKPKVVEDEKCSP--VLRYVPLSRRKKGESPFTECPKSIK-------------KKLLKEGYSLPTTRKGLGYKSPEP
        A KE  + +     +KGE STS  K  ++ DEK S   +LRYVPLSRR+KGESPF + P+ +K             KKLL+EG+ +P +RKG GYKSPEP
Subjt:  ARKEVVEDVKACDLKKGETSTSLVKPKVVEDEKCSP--VLRYVPLSRRKKGESPFTECPKSIK-------------KKLLKEGYSLPTTRKGLGYKSPEP

Query:  VRITRKGKANVADINHITVEEVDDSKEEESVDQRASVFRRIRPPVARASVFQRIIVNEIEKESAQLTNSSTRSSVFRRLSMPAGEEESTLSTPDVTRPSA
        + I RK K  V D NHITV EVD  +E+E   QR S F +IRP V R +VF+R+ V + E++  Q T+S  + S  +RL+M   +E+ T      TRPSA
Subjt:  VRITRKGKANVADINHITVEEVDDSKEEESVDQRASVFRRIRPPVARASVFQRIIVNEIEKESAQLTNSSTRSSVFRRLSMPAGEEESTLSTPDVTRPSA

Query:  FRR
        F R
Subjt:  FRR

A0A5A7UMY2 Reverse transcriptase domain-containing protein2.1e-3542.92Show/hide
Query:  ARKEVVEDVKACDLKKGETSTSLVKPKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPKSIK-------------------------------------
        A KE  + +      K E ST+  K  ++ DEK S  P+LRYVPLSRRKKGESPF E P+ +K                                     
Subjt:  ARKEVVEDVKACDLKKGETSTSLVKPKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPKSIK-------------------------------------

Query:  ------KKLLKEGYSLPTTRKGLGYKSPEPVRITRKGKANVADINHITVEEVDDSKEEESVDQRASVFRRIRPPVARASVFQRIIVNEIEKESAQLTNSS
              KKLL+EG+ +P +RKGLGYKSPEP+RITRKGK  V D NHITV+EVD  +E+E  +QR S F RI P VARA VF+R+ + E +++  Q T++ 
Subjt:  ------KKLLKEGYSLPTTRKGLGYKSPEPVRITRKGKANVADINHITVEEVDDSKEEESVDQRASVFRRIRPPVARASVFQRIIVNEIEKESAQLTNSS

Query:  TRSSVFRRLSMPAGEEESTLSTPDVTRPSAFRR
         R S F+RL++   EE+    T   T+PSAF R
Subjt:  TRSSVFRRLSMPAGEEESTLSTPDVTRPSAFRR

A0A5D3C8N8 Ribonuclease H4.3e-3349.17Show/hide
Query:  KGETSTSLVKPKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPKSIKK---KLLKEGYSL---PTTRKGLGYKSPEPVRITRKGKANVADINHITVEEV
        K E STS  K  ++ +E  S  P+LRYVPLSR KKGESPF E P+ +K    ++LKE +++     T+KGLGYKSPEP+RITRKGK  V D NHITV+EV
Subjt:  KGETSTSLVKPKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPKSIKK---KLLKEGYSL---PTTRKGLGYKSPEPVRITRKGKANVADINHITVEEV

Query:  DDSKEEESVDQRASVFRRIRPPVARASVFQRIIVNEIEKESAQLTNSSTRSSVFRRLSMPAGEEESTLSTPDVTRPSAFRR
        D  + +E   QR S F RI P VARA VF+R+ + E +++  Q T++  R S F+RL++   EE+        T+PSAF R
Subjt:  DDSKEEESVDQRASVFRRIRPPVARASVFQRIIVNEIEKESAQLTNSSTRSSVFRRLSMPAGEEESTLSTPDVTRPSAFRR

A0A5D3C8N8 Ribonuclease H8.8e-0243.1Show/hide
Query:  RCFLDDGQGEALEIVTCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLSLPQEAK
        R FL D Q E   +V CH ++  E++ +P  S        DLS F++ DLLSLPQE K
Subjt:  RCFLDDGQGEALEIVTCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLSLPQEAK

A0A5D3C8N8 Ribonuclease H6.9e-3135.29Show/hide
Query:  LSSFSIKDLLSLPQEAKKPQADARKEVVEDVKACDLKKGETSTSLVKPKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPKSIK---------------
        L   S++ LL   ++  + ++ A KE  + +      K E ST+  K  ++ DEK S  P+LRYVPLSRRKKGESPF E P+ +K               
Subjt:  LSSFSIKDLLSLPQEAKKPQADARKEVVEDVKACDLKKGETSTSLVKPKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPKSIK---------------

Query:  --------------------------------------------------------------KKLLKEGYSLPTTRKGLGYKSPEPVRITRKGKANVADI
                                                                      KKLL+EG+ +P +RKGLGYKSPEP+RITRKGK  V D 
Subjt:  --------------------------------------------------------------KKLLKEGYSLPTTRKGLGYKSPEPVRITRKGKANVADI

Query:  NHITVEEVDDSKEEESVDQRASVFRRIRPPVARASVFQRIIVNEIEKESAQLTNSSTRSSVFRRLSMPAGEEESTLSTPDVTRPSAFRR
        NHIT++E D  +E+E   QR S F RI P VARA VF+++ + E E++  Q T++  R S F+RL++   EE+    T   T+PSAF R
Subjt:  NHITVEEVDDSKEEESVDQRASVFRRIRPPVARASVFQRIIVNEIEKESAQLTNSSTRSSVFRRLSMPAGEEESTLSTPDVTRPSAFRR

A0A5D3DXC7 Reverse transcriptase domain-containing protein2.3e-3441.15Show/hide
Query:  ARKEVVEDVKACDLKKGETSTSLVKPKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPKSIK-------------------------------------
        A KE  + +      K E ST+  K  ++ DEK S  P+LRYVPLSRRKKGESPF E P+ +K                                     
Subjt:  ARKEVVEDVKACDLKKGETSTSLVKPKVVEDEKCS--PVLRYVPLSRRKKGESPFTECPKSIK-------------------------------------

Query:  ----------------KKLLKEGYSLPTTRKGLGYKSPEPVRITRKGKANVADINHITVEEVDDSKEEESVDQRASVFRRIRPPVARASVFQRIIVNEIE
                        KKLL+EG+ +P +RKGLGYKSPEP+RITRKGK  V D NHITV+EVD  +E+E  +QR S F RI P VARA VF+R+ + E E
Subjt:  ----------------KKLLKEGYSLPTTRKGLGYKSPEPVRITRKGKANVADINHITVEEVDDSKEEESVDQRASVFRRIRPPVARASVFQRIIVNEIE

Query:  KESAQLTNSSTRSSVFRRLSMPAGEEESTLSTPDVTRPSAFRR
        ++  Q T++  + S F+RL++   EE+    T   T+PSAF R
Subjt:  KESAQLTNSSTRSSVFRRLSMPAGEEESTLSTPDVTRPSAFRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTGAGATCAGGGAGGATCATACTCCTCTTGCTGTTGCAAGCAGGATCTCAAAGCTGATTGAAGAATCCTCTAAGGATAAAGTTGCAGTCAAAGACAACCCGCTTTTCGA
ATCTGTTGTTCCAACATCTAAGCAGCCAAAGGATGCACTAAACCCTGATGTGATGTCTGTCATGATGGCTGATGTAGACCAGGATGAAAGAATGGCAGAGATGGAAAGAA
AACTCAATCTCTTGATGAAGGCAGTTGATGAAAGAGATCTGGAGATTGCCTATTTGAAGAACCAGCTGCAAAACCGAGAAACGGCTGAGTCTAAATACTTCCCAAGGTGC
TTTCTCGATGATGGTCAAGGAGAAGCACTTGAAATCGTCACTTGTCACATTGTGGACGTGGTGGAAGATGATGATGTCCCTGCTAGTTCCTCGGGAACGGTGGCAGGTCC
AGGAGACTTATCCTCCTTCAGCATAAAGGATTTATTGTCACTTCCTCAGGAAGCTAAAAAGCCACAAGCAGATGCAAGGAAGGAAGTTGTTGAGGATGTGAAGGCATGTG
ACCTGAAAAAGGGTGAAACATCTACAAGCCTTGTGAAACCTAAAGTTGTAGAGGATGAGAAATGTTCACCTGTCCTACGATACGTCCCTTTATCTCGGCGTAAAAAGGGT
GAATCACCTTTCACTGAATGTCCGAAAAGCATAAAGAAGAAGCTTCTAAAGGAAGGCTATAGTCTACCTACGACGAGAAAAGGACTTGGATATAAATCGCCCGAACCGGT
TCGCATAACAAGAAAAGGGAAGGCGAACGTGGCAGACATAAATCATATAACAGTAGAGGAGGTTGATGACTCAAAAGAAGAAGAGAGCGTCGACCAACGAGCTTCTGTTT
TTAGGCGCATCAGGCCACCAGTTGCTCGTGCTTCTGTCTTTCAGAGGATAATTGTGAATGAAATAGAAAAAGAAAGTGCACAACTTACCAATAGCTCCACTCGATCTTCA
GTTTTTCGAAGGTTAAGTATGCCTGCTGGTGAAGAAGAGAGTACACTTTCAACTCCGGATGTCACGCGACCTTCAGCTTTTCGAAGATGCGATGAAAACTGA
mRNA sequenceShow/hide mRNA sequence
ATTGAGATCAGGGAGGATCATACTCCTCTTGCTGTTGCAAGCAGGATCTCAAAGCTGATTGAAGAATCCTCTAAGGATAAAGTTGCAGTCAAAGACAACCCGCTTTTCGA
ATCTGTTGTTCCAACATCTAAGCAGCCAAAGGATGCACTAAACCCTGATGTGATGTCTGTCATGATGGCTGATGTAGACCAGGATGAAAGAATGGCAGAGATGGAAAGAA
AACTCAATCTCTTGATGAAGGCAGTTGATGAAAGAGATCTGGAGATTGCCTATTTGAAGAACCAGCTGCAAAACCGAGAAACGGCTGAGTCTAAATACTTCCCAAGGTGC
TTTCTCGATGATGGTCAAGGAGAAGCACTTGAAATCGTCACTTGTCACATTGTGGACGTGGTGGAAGATGATGATGTCCCTGCTAGTTCCTCGGGAACGGTGGCAGGTCC
AGGAGACTTATCCTCCTTCAGCATAAAGGATTTATTGTCACTTCCTCAGGAAGCTAAAAAGCCACAAGCAGATGCAAGGAAGGAAGTTGTTGAGGATGTGAAGGCATGTG
ACCTGAAAAAGGGTGAAACATCTACAAGCCTTGTGAAACCTAAAGTTGTAGAGGATGAGAAATGTTCACCTGTCCTACGATACGTCCCTTTATCTCGGCGTAAAAAGGGT
GAATCACCTTTCACTGAATGTCCGAAAAGCATAAAGAAGAAGCTTCTAAAGGAAGGCTATAGTCTACCTACGACGAGAAAAGGACTTGGATATAAATCGCCCGAACCGGT
TCGCATAACAAGAAAAGGGAAGGCGAACGTGGCAGACATAAATCATATAACAGTAGAGGAGGTTGATGACTCAAAAGAAGAAGAGAGCGTCGACCAACGAGCTTCTGTTT
TTAGGCGCATCAGGCCACCAGTTGCTCGTGCTTCTGTCTTTCAGAGGATAATTGTGAATGAAATAGAAAAAGAAAGTGCACAACTTACCAATAGCTCCACTCGATCTTCA
GTTTTTCGAAGGTTAAGTATGCCTGCTGGTGAAGAAGAGAGTACACTTTCAACTCCGGATGTCACGCGACCTTCAGCTTTTCGAAGATGCGATGAAAACTGA
Protein sequenceShow/hide protein sequence
IEIREDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVVPTSKQPKDALNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQNRETAESKYFPRC
FLDDGQGEALEIVTCHIVDVVEDDDVPASSSGTVAGPGDLSSFSIKDLLSLPQEAKKPQADARKEVVEDVKACDLKKGETSTSLVKPKVVEDEKCSPVLRYVPLSRRKKG
ESPFTECPKSIKKKLLKEGYSLPTTRKGLGYKSPEPVRITRKGKANVADINHITVEEVDDSKEEESVDQRASVFRRIRPPVARASVFQRIIVNEIEKESAQLTNSSTRSS
VFRRLSMPAGEEESTLSTPDVTRPSAFRRCDEN