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Spg028808 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028808
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionSEC12-like protein 2
Genome locationscaffold7:18495918..18497276
RNA-Seq ExpressionSpg028808
SyntenySpg028808
Gene Ontology termsGO:0006810 - transport (biological process)
GO:0009987 - cellular process (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599876.1 SEC12-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]7.5e-3174.04Show/hide
Query:  METPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESENDR-DQSGDDENSANEKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQ
        METPD SNSRKYGVPFYAAAWLP  SL   QEP +SEND  DQS D   SAN KS  S PT A+NYY+AAAGGGGEGRSGISNAL+LA+FD ESR+LSDQ
Subjt:  METPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESENDR-DQSGDDENSANEKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQ

Query:  PNPK
        P  K
Subjt:  PNPK

KAG6601644.1 SEC12-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]1.6e-3377.67Show/hide
Query:  METPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESENDRDQSGDDENSANEKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQP
        ME P+ SNSRKYGVPFYAAAW+PS SLK E+E  ESE DRDQSGD +  A++K+L S PTTAVNYYVAAAGGGGEGRSGISNALILAHFD ESR+LSDQP
Subjt:  METPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESENDRDQSGDDENSANEKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQP

Query:  NPK
          K
Subjt:  NPK

XP_022957331.1 SEC12-like protein 2 [Cucurbita moschata]2.7e-3376.7Show/hide
Query:  METPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESENDRDQSGDDENSANEKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQP
        ME P+ SNSRKYGVPFYAAAW+PS SLK E+E  ESE DRDQSGD + SA +++L S PTTAV+YYVAAAGGGGEGRSGISNALILAHFD ESR+LSDQP
Subjt:  METPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESENDRDQSGDDENSANEKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQP

Query:  NPK
          K
Subjt:  NPK

XP_022998007.1 SEC12-like protein 2 [Cucurbita maxima]2.1e-3378.1Show/hide
Query:  METPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESENDRDQSGDDEN--SANEKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSD
        ME P+ SNSRKYGVPFYAAAW+PS SLK EQE  ESE DRDQSGD +   SA++K+L S PTTAVNYYVAAAGGGGEGRSGISNALILAHFD ESR+LSD
Subjt:  METPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESENDRDQSGDDEN--SANEKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSD

Query:  QPNPK
        QP  K
Subjt:  QPNPK

XP_023547354.1 SEC12-like protein 2 [Cucurbita pepo subsp. pepo]1.4e-3276.19Show/hide
Query:  METPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESENDRDQSGDDEN--SANEKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSD
        ME P+ SNSRKYGVPFYAAAW+PS SLK E+E  ESE DRDQSGD +   SA++K+  S PTTAVNYYVAAAGGGGEGRSGISNALILAHFD ESR+LSD
Subjt:  METPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESENDRDQSGDDEN--SANEKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSD

Query:  QPNPK
        QP  K
Subjt:  QPNPK

TrEMBL top hitse value%identityAlignment
A0A6J1DBY0 SEC12-like protein 23.1e-3073.53Show/hide
Query:  ETPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESENDRDQSGDDENSANEKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQPN
        +TPD SNSRKYGVPFYAAAW+P  S+K E EP  SEND +QSGDD     +KSL    TTAV+YYVAAAGGGGEGRSGISNALILAHFD ESR+LSDQP 
Subjt:  ETPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESENDRDQSGDDENSANEKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQPN

Query:  PK
         K
Subjt:  PK

A0A6J1FTE5 SEC12-like protein 23.1e-3073.08Show/hide
Query:  METPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESENDR-DQSGDDENSANEKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQ
        METPD S SRKYGVPFYAAAWLP  SL   QEP +SEND  DQS D   SAN KS  S PT A+NYY+AAAGGGGEGRSGISNAL+LA+FD ESR+LSDQ
Subjt:  METPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESENDR-DQSGDDENSANEKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQ

Query:  PNPK
        P  K
Subjt:  PNPK

A0A6J1GYX6 SEC12-like protein 21.3e-3376.7Show/hide
Query:  METPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESENDRDQSGDDENSANEKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQP
        ME P+ SNSRKYGVPFYAAAW+PS SLK E+E  ESE DRDQSGD + SA +++L S PTTAV+YYVAAAGGGGEGRSGISNALILAHFD ESR+LSDQP
Subjt:  METPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESENDRDQSGDDENSANEKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQP

Query:  NPK
          K
Subjt:  NPK

A0A6J1J4E0 SEC12-like protein 26.8e-3072.12Show/hide
Query:  METPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESENDR-DQSGDDENSANEKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQ
        METPD SNSRKYGVPFYAAAWLP  SL   QEP +SEND  DQS D   SAN KS  S PT A+NYY+AAAGGGGEGRSGISNAL+LA+FD +SR+LS Q
Subjt:  METPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESENDR-DQSGDDENSANEKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQ

Query:  PNPK
        P  K
Subjt:  PNPK

A0A6J1K6N4 SEC12-like protein 21.0e-3378.1Show/hide
Query:  METPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESENDRDQSGDDEN--SANEKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSD
        ME P+ SNSRKYGVPFYAAAW+PS SLK EQE  ESE DRDQSGD +   SA++K+L S PTTAVNYYVAAAGGGGEGRSGISNALILAHFD ESR+LSD
Subjt:  METPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESENDRDQSGDDEN--SANEKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSD

Query:  QPNPK
        QP  K
Subjt:  QPNPK

SwissProt top hitse value%identityAlignment
Q39221 SEC12-like protein 26.8e-1140.59Show/hide
Query:  ETPDCSNSRKYGVPFYAAAWLPSASL--KYEQEPQESENDRDQSGDDENSANEKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQ
        ET   SN + YGVP YAA W+P   +  K   +P++SE+      DDE+S++  S  S         +  +GGGGEGRSGISN +++   DL + +LS+Q
Subjt:  ETPDCSNSRKYGVPFYAAAWLPSASL--KYEQEPQESENDRDQSGDDENSANEKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQ

Query:  P
        P
Subjt:  P

Arabidopsis top hitse value%identityAlignment
AT2G01470.1 SEC12P-like 2 protein4.9e-1240.59Show/hide
Query:  ETPDCSNSRKYGVPFYAAAWLPSASL--KYEQEPQESENDRDQSGDDENSANEKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQ
        ET   SN + YGVP YAA W+P   +  K   +P++SE+      DDE+S++  S  S         +  +GGGGEGRSGISN +++   DL + +LS+Q
Subjt:  ETPDCSNSRKYGVPFYAAAWLPSASL--KYEQEPQESENDRDQSGDDENSANEKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQ

Query:  P
        P
Subjt:  P

AT5G50550.1 Transducin/WD40 repeat-like superfamily protein6.6e-0936.17Show/hide
Query:  SNSRKYGVPFYAAAWLPSASLKYEQEPQESENDRDQSGDDENSANEKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQP
        SN + YGVP YA  W+        +E   S+  +DQ  DD++ ++  S           Y+  +GGGGEGRSGI N +++   DL + +LS+QP
Subjt:  SNSRKYGVPFYAAAWLPSASLKYEQEPQESENDRDQSGDDENSANEKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQP

AT5G50650.1 Transducin/WD40 repeat-like superfamily protein6.6e-0936.17Show/hide
Query:  SNSRKYGVPFYAAAWLPSASLKYEQEPQESENDRDQSGDDENSANEKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQP
        SN + YGVP YA  W+        +E   S+  +DQ  DD++ ++  S           Y+  +GGGGEGRSGI N +++   DL + +LS+QP
Subjt:  SNSRKYGVPFYAAAWLPSASLKYEQEPQESENDRDQSGDDENSANEKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACTCCCGACTGTTCCAATTCCCGCAAGTATGGTGTCCCTTTCTACGCAGCCGCTTGGCTGCCTTCCGCTTCCCTCAAATACGAGCAGGAGCCTCAAGAATCTGA
AAATGATCGAGATCAATCCGGTGATGATGAAAATTCCGCCAACGAAAAATCTCTTTCATCTCAGCCAACCACCGCAGTTAATTACTACGTAGCCGCCGCTGGCGGTGGTG
GAGAAGGTCGGAGTGGAATTTCCAATGCCCTCATACTCGCTCATTTCGATTTGGAATCCCGCACGCTCTCTGATCAGCCTAATCCAAAAGAAAGCTCTAGTGATGTTCAT
CCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAACTCCCGACTGTTCCAATTCCCGCAAGTATGGTGTCCCTTTCTACGCAGCCGCTTGGCTGCCTTCCGCTTCCCTCAAATACGAGCAGGAGCCTCAAGAATCTGA
AAATGATCGAGATCAATCCGGTGATGATGAAAATTCCGCCAACGAAAAATCTCTTTCATCTCAGCCAACCACCGCAGTTAATTACTACGTAGCCGCCGCTGGCGGTGGTG
GAGAAGGTCGGAGTGGAATTTCCAATGCCCTCATACTCGCTCATTTCGATTTGGAATCCCGCACGCTCTCTGATCAGCCTAATCCAAAAGAAAGCTCTAGTGATGTTCAT
CCATAG
Protein sequenceShow/hide protein sequence
METPDCSNSRKYGVPFYAAAWLPSASLKYEQEPQESENDRDQSGDDENSANEKSLSSQPTTAVNYYVAAAGGGGEGRSGISNALILAHFDLESRTLSDQPNPKESSSDVH
P