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Spg028841 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028841
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCACTA en-spm transposon protein
Genome locationscaffold7:11634936..11635659
RNA-Seq ExpressionSpg028841
SyntenySpg028841
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038349.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]1.5e-0836.94Show/hide
Query:  RRVFLSTRKNVNMHVTKYGRIPIHIDPEVKKPVGEYAMQFIIVIGTVVRESFSVRFNTWDDVTEEAKNLVKARLLVQGPELEASESNKMSRSILSFNHRA
        RR   S    +  HV   GRIP+ I P  +KP+  +A++F   IG  VR++FS+ +  W DV  E   +VK      G   E S +NK +R    +NH +
Subjt:  RRVFLSTRKNVNMHVTKYGRIPIHIDPEVKKPVGEYAMQFIIVIGTVVRESFSVRFNTWDDVTEEAKNLVKARLLVQGPELEASESNKMSRSILSFNHRA

Query:  GLKSFINIQHE
        G KSF+  Q+E
Subjt:  GLKSFINIQHE

KAA0043563.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]5.3e-0633.61Show/hide
Query:  HVTKYGRIPIHIDPEVKKPVGEYAMQFIIVIGTVVRESFSVRFNTWDDVTEEAKNLVKARL---------------LVQGPE---------LEASESNKM
        +V   GRIP+ I P  +KP+  YA+ F   IG  VR+ FS+    W D+  E   +VKA L                   PE         LE S +NK 
Subjt:  HVTKYGRIPIHIDPEVKKPVGEYAMQFIIVIGTVVRESFSVRFNTWDDVTEEAKNLVKARL---------------LVQGPE---------LEASESNKM

Query:  SRSILSFNHRAGLKSFINIQHE
        ++    +NH +G KSF+  QHE
Subjt:  SRSILSFNHRAGLKSFINIQHE

KAA0060035.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]3.1e-0636.94Show/hide
Query:  RRVFLSTRKNVNMHVTKYGRIPIHIDPEVKKPVGEYAMQFIIVIGTVVRESFSVRFNTWDDVTEEAKNLVKARLLVQGPELEASESNKMSRSILSFNHRA
        RR   S    +  HV   GRIP+ I P  +K +  +A+ F   IG  VR++F VR   W DV  E   +VK      G   E S +NK +R    +NH +
Subjt:  RRVFLSTRKNVNMHVTKYGRIPIHIDPEVKKPVGEYAMQFIIVIGTVVRESFSVRFNTWDDVTEEAKNLVKARLLVQGPELEASESNKMSRSILSFNHRA

Query:  GLKSFINIQHE
        G KSF+  Q+E
Subjt:  GLKSFINIQHE

TYJ97292.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]3.1e-0636.94Show/hide
Query:  RRVFLSTRKNVNMHVTKYGRIPIHIDPEVKKPVGEYAMQFIIVIGTVVRESFSVRFNTWDDVTEEAKNLVKARLLVQGPELEASESNKMSRSILSFNHRA
        RR   S    +  HV   GRIP+ I P  +K +  +A+ F   IG  VR++F VR   W DV  E   +VK      G   E S +NK +R    +NH +
Subjt:  RRVFLSTRKNVNMHVTKYGRIPIHIDPEVKKPVGEYAMQFIIVIGTVVRESFSVRFNTWDDVTEEAKNLVKARLLVQGPELEASESNKMSRSILSFNHRA

Query:  GLKSFINIQHE
        G KSF+  Q+E
Subjt:  GLKSFINIQHE

TYK19801.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]1.8e-0640.66Show/hide
Query:  IPIHIDPEVKKPVGEYAMQFIIVIGTVVRESFSVRFNTWDDVTEEAKNLVKARLLVQGPELEASESNKMSRSILSFNHRAGLKSFINIQHE
        +P+ I P+ KKP+  +A+QF + IG  VR+ FSV    W DV  E   +VK      G   E S++NK +R    +NH  G KSF+  QHE
Subjt:  IPIHIDPEVKKPVGEYAMQFIIVIGTVVRESFSVRFNTWDDVTEEAKNLVKARLLVQGPELEASESNKMSRSILSFNHRAGLKSFINIQHE

TrEMBL top hitse value%identityAlignment
A0A5A7TAG5 CACTA en-spm transposon protein7.2e-0936.94Show/hide
Query:  RRVFLSTRKNVNMHVTKYGRIPIHIDPEVKKPVGEYAMQFIIVIGTVVRESFSVRFNTWDDVTEEAKNLVKARLLVQGPELEASESNKMSRSILSFNHRA
        RR   S    +  HV   GRIP+ I P  +KP+  +A++F   IG  VR++FS+ +  W DV  E   +VK      G   E S +NK +R    +NH +
Subjt:  RRVFLSTRKNVNMHVTKYGRIPIHIDPEVKKPVGEYAMQFIIVIGTVVRESFSVRFNTWDDVTEEAKNLVKARLLVQGPELEASESNKMSRSILSFNHRA

Query:  GLKSFINIQHE
        G KSF+  Q+E
Subjt:  GLKSFINIQHE

A0A5A7UQB1 CACTA en-spm transposon protein9.8e-0637.84Show/hide
Query:  HVTKYGRIPIHIDPEVKKPVGEYAMQFIIVIGTVVRESFSVRFNTWDDVTEEAKNLVKARL----LVQGPE---------LEASESNKMSRSILSFNHRA
        +V   GRI + I P  +KP+  + ++F   IG  VR++F V    W DV  E   +VK  L     VQ PE         LE S+ NK++R   S+NH  
Subjt:  HVTKYGRIPIHIDPEVKKPVGEYAMQFIIVIGTVVRESFSVRFNTWDDVTEEAKNLVKARL----LVQGPE---------LEASESNKMSRSILSFNHRA

Query:  GLKSFINIQHE
        G KSF   QHE
Subjt:  GLKSFINIQHE

A0A5A7V2C4 CACTA en-spm transposon protein1.5e-0636.94Show/hide
Query:  RRVFLSTRKNVNMHVTKYGRIPIHIDPEVKKPVGEYAMQFIIVIGTVVRESFSVRFNTWDDVTEEAKNLVKARLLVQGPELEASESNKMSRSILSFNHRA
        RR   S    +  HV   GRIP+ I P  +K +  +A+ F   IG  VR++F VR   W DV  E   +VK      G   E S +NK +R    +NH +
Subjt:  RRVFLSTRKNVNMHVTKYGRIPIHIDPEVKKPVGEYAMQFIIVIGTVVRESFSVRFNTWDDVTEEAKNLVKARLLVQGPELEASESNKMSRSILSFNHRA

Query:  GLKSFINIQHE
        G KSF+  Q+E
Subjt:  GLKSFINIQHE

A0A5D3BBU0 CACTA en-spm transposon protein1.5e-0636.94Show/hide
Query:  RRVFLSTRKNVNMHVTKYGRIPIHIDPEVKKPVGEYAMQFIIVIGTVVRESFSVRFNTWDDVTEEAKNLVKARLLVQGPELEASESNKMSRSILSFNHRA
        RR   S    +  HV   GRIP+ I P  +K +  +A+ F   IG  VR++F VR   W DV  E   +VK      G   E S +NK +R    +NH +
Subjt:  RRVFLSTRKNVNMHVTKYGRIPIHIDPEVKKPVGEYAMQFIIVIGTVVRESFSVRFNTWDDVTEEAKNLVKARLLVQGPELEASESNKMSRSILSFNHRA

Query:  GLKSFINIQHE
        G KSF+  Q+E
Subjt:  GLKSFINIQHE

A0A5D3D8A7 CACTA en-spm transposon protein8.8e-0740.66Show/hide
Query:  IPIHIDPEVKKPVGEYAMQFIIVIGTVVRESFSVRFNTWDDVTEEAKNLVKARLLVQGPELEASESNKMSRSILSFNHRAGLKSFINIQHE
        +P+ I P+ KKP+  +A+QF + IG  VR+ FSV    W DV  E   +VK      G   E S++NK +R    +NH  G KSF+  QHE
Subjt:  IPIHIDPEVKKPVGEYAMQFIIVIGTVVRESFSVRFNTWDDVTEEAKNLVKARLLVQGPELEASESNKMSRSILSFNHRAGLKSFINIQHE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAAAAGATATTTGCCGACGTGTATTTCTCTCGACACGTAAGAACGTGAACATGCATGTCACAAAATATGGCAGAATTCCGATCCATATCGACCCAGAGGTGAAAAAACC
AGTTGGAGAATATGCGATGCAATTCATCATAGTGATTGGTACGGTCGTTCGGGAGTCTTTCTCGGTTCGATTCAACACATGGGATGATGTAACTGAAGAGGCTAAGAACC
TAGTAAAGGCTCGACTGCTGGTTCAAGGACCCGAATTGGAAGCTTCGGAATCGAATAAAATGAGTCGATCCATTTTGTCGTTTAACCACAGGGCTGGTTTGAAGTCATTT
ATAAATATCCAACACGAAACGATAGGATGTGAATAA
mRNA sequenceShow/hide mRNA sequence
AAAAAAGATATTTGCCGACGTGTATTTCTCTCGACACGTAAGAACGTGAACATGCATGTCACAAAATATGGCAGAATTCCGATCCATATCGACCCAGAGGTGAAAAAACC
AGTTGGAGAATATGCGATGCAATTCATCATAGTGATTGGTACGGTCGTTCGGGAGTCTTTCTCGGTTCGATTCAACACATGGGATGATGTAACTGAAGAGGCTAAGAACC
TAGTAAAGGCTCGACTGCTGGTTCAAGGACCCGAATTGGAAGCTTCGGAATCGAATAAAATGAGTCGATCCATTTTGTCGTTTAACCACAGGGCTGGTTTGAAGTCATTT
ATAAATATCCAACACGAAACGATAGGATGTGAATAA
Protein sequenceShow/hide protein sequence
KKDICRRVFLSTRKNVNMHVTKYGRIPIHIDPEVKKPVGEYAMQFIIVIGTVVRESFSVRFNTWDDVTEEAKNLVKARLLVQGPELEASESNKMSRSILSFNHRAGLKSF
INIQHETIGCE