; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg028850 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028850
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCCHC-type domain-containing protein
Genome locationscaffold7:14236345..14242262
RNA-Seq ExpressionSpg028850
SyntenySpg028850
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_021758384.1 uncharacterized protein LOC110723340 [Chenopodium quinoa]1.1e-0734.68Show/hide
Query:  ETLVKQLTELKVTEEERASVFKLKDEEI-DRSEKKLENALVCKILSQKQINPNMFKSKMPRIWNQE-HTTISKVGFNLFLCKFKNGRIKSLIEDNGPWFF
        + ++K+  +LK+T++E   V    + E  D S  +L  ALV ++ + K  N +  K  +  +W  + +  I  +  NLF+ +F N   KS I +  PWFF
Subjt:  ETLVKQLTELKVTEEERASVFKLKDEEI-DRSEKKLENALVCKILSQKQINPNMFKSKMPRIWNQE-HTTISKVGFNLFLCKFKNGRIKSLIEDNGPWFF

Query:  DKALLLFKEPRGGNYGEDIEFRSI
        D  LLLFKE +GG     IEF+ I
Subjt:  DKALLLFKEPRGGNYGEDIEFRSI

XP_022143536.1 uncharacterized protein LOC111013413 [Momordica charantia]1.1e-1843.33Show/hide
Query:  EETLVKQLTELKVTEEERASVFKLKDEEIDRSEKKLENALVCKILSQKQINPNMFKSKMPRIWNQEHTTISKVGFNLFLCKFKNGRIKSLIEDNGPWFFD
        +E L +Q+  LK+T+EE+  +F + ++EI+  +K+ + +LVCK+L+ K I   +FK+ MPRIW   +  I  VG NLFLCKFK  R KS I +NGP FFD
Subjt:  EETLVKQLTELKVTEEERASVFKLKDEEIDRSEKKLENALVCKILSQKQINPNMFKSKMPRIWNQEHTTISKVGFNLFLCKFKNGRIKSLIEDNGPWFFD

Query:  KALLLFKEPRGGNYGEDIEF
        K++++ +EPR      ++E+
Subjt:  KALLLFKEPRGGNYGEDIEF

XP_022154990.1 uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]2.4e-1843.41Show/hide
Query:  ETLVKQLTE-LKVTEEER--------ASVFKLKDEEIDRSEKKLENALVCKILSQKQINPNMFKSKMPRIWNQEHTTISKVGFNLFLCKFKNGRIKSLIE
        + L+ QL E LK+T+EE+          +F + ++EI+  +K+ + +LVCK+L+ K I   +FK+ MPRIW   +  I  VG NLFLCKFK  R KS I 
Subjt:  ETLVKQLTE-LKVTEEER--------ASVFKLKDEEIDRSEKKLENALVCKILSQKQINPNMFKSKMPRIWNQEHTTISKVGFNLFLCKFKNGRIKSLIE

Query:  DNGPWFFDKALLLFKEPRGGNYGEDIEFR
        +NGPWFFDK++++ +EPR      ++EFR
Subjt:  DNGPWFFDKALLLFKEPRGGNYGEDIEFR

XP_022154991.1 uncharacterized protein LOC111022134 isoform X2 [Momordica charantia]1.8e-1843.08Show/hide
Query:  ETLVKQLTE-LKVTEEER--------ASVFKLKDEEIDRSEKKLENALVCKILSQKQINPNMFKSKMPRIWNQEHTTISKVGFNLFLCKFKNGRIKSLIE
        + L+ QL E LK+T+EE+          +F + ++EI+  +K+ + +LVCK+L+ K I   +FK+ MPRIW   +  I  VG NLFLCKFK  R KS I 
Subjt:  ETLVKQLTE-LKVTEEER--------ASVFKLKDEEIDRSEKKLENALVCKILSQKQINPNMFKSKMPRIWNQEHTTISKVGFNLFLCKFKNGRIKSLIE

Query:  DNGPWFFDKALLLFKEPRGGNYGEDIEFRS
        +NGPWFFDK++++ +EPR      ++EFR+
Subjt:  DNGPWFFDKALLLFKEPRGGNYGEDIEFRS

XP_035546596.1 uncharacterized protein LOC118348645 [Juglans regia]5.0e-0833.88Show/hide
Query:  EETLVKQLTELKVTEEERASVFKLKDEEIDRSEKKLENALVCKILSQKQINPNMFKSKMPRIWNQE-HTTISKVGFNLFLCKFKNGRIKSLIEDNGPWFF
        EE +      LK+TEEE+   + LK+EEI  S     + LV  + + +++N   FK+ M R+WN E   T   +G N FL +F N  +++ +    PW F
Subjt:  EETLVKQLTELKVTEEERASVFKLKDEEIDRSEKKLENALVCKILSQKQINPNMFKSKMPRIWNQE-HTTISKVGFNLFLCKFKNGRIKSLIEDNGPWFF

Query:  DKALLLFKEPRGGNYGEDIEF
        D+ L+  +E +G    +DI+F
Subjt:  DKALLLFKEPRGGNYGEDIEF

TrEMBL top hitse value%identityAlignment
A0A5C7IMZ7 DUF4283 domain-containing protein7.0e-0833.33Show/hide
Query:  VKQLTELKVTEEERASVFKLKDEEIDRSEKKLENALVCKILSQKQINPNMFKSKMPRIW-NQEHTTISKVGFNLFLCKFKNGRIKSLIEDNGPWFFDKAL
        V +L E    +E+   + +L++   ++ EK+L   L  K+LS K +N + F + MP+IW   +   I  +  N F   FKN + +  I + GPW FDKAL
Subjt:  VKQLTELKVTEEERASVFKLKDEEIDRSEKKLENALVCKILSQKQINPNMFKSKMPRIW-NQEHTTISKVGFNLFLCKFKNGRIKSLIEDNGPWFFDKAL

Query:  LLFKEPRGGNYGEDIEFRSI
        L+  EP+G    +D+ F  +
Subjt:  LLFKEPRGGNYGEDIEFRSI

A0A6J1CQJ5 uncharacterized protein LOC1110134135.2e-1943.33Show/hide
Query:  EETLVKQLTELKVTEEERASVFKLKDEEIDRSEKKLENALVCKILSQKQINPNMFKSKMPRIWNQEHTTISKVGFNLFLCKFKNGRIKSLIEDNGPWFFD
        +E L +Q+  LK+T+EE+  +F + ++EI+  +K+ + +LVCK+L+ K I   +FK+ MPRIW   +  I  VG NLFLCKFK  R KS I +NGP FFD
Subjt:  EETLVKQLTELKVTEEERASVFKLKDEEIDRSEKKLENALVCKILSQKQINPNMFKSKMPRIWNQEHTTISKVGFNLFLCKFKNGRIKSLIEDNGPWFFD

Query:  KALLLFKEPRGGNYGEDIEF
        K++++ +EPR      ++E+
Subjt:  KALLLFKEPRGGNYGEDIEF

A0A6J1DL64 uncharacterized protein LOC111022134 isoform X11.2e-1843.41Show/hide
Query:  ETLVKQLTE-LKVTEEER--------ASVFKLKDEEIDRSEKKLENALVCKILSQKQINPNMFKSKMPRIWNQEHTTISKVGFNLFLCKFKNGRIKSLIE
        + L+ QL E LK+T+EE+          +F + ++EI+  +K+ + +LVCK+L+ K I   +FK+ MPRIW   +  I  VG NLFLCKFK  R KS I 
Subjt:  ETLVKQLTE-LKVTEEER--------ASVFKLKDEEIDRSEKKLENALVCKILSQKQINPNMFKSKMPRIWNQEHTTISKVGFNLFLCKFKNGRIKSLIE

Query:  DNGPWFFDKALLLFKEPRGGNYGEDIEFR
        +NGPWFFDK++++ +EPR      ++EFR
Subjt:  DNGPWFFDKALLLFKEPRGGNYGEDIEFR

A0A6J1DQC9 uncharacterized protein LOC111022134 isoform X28.8e-1943.08Show/hide
Query:  ETLVKQLTE-LKVTEEER--------ASVFKLKDEEIDRSEKKLENALVCKILSQKQINPNMFKSKMPRIWNQEHTTISKVGFNLFLCKFKNGRIKSLIE
        + L+ QL E LK+T+EE+          +F + ++EI+  +K+ + +LVCK+L+ K I   +FK+ MPRIW   +  I  VG NLFLCKFK  R KS I 
Subjt:  ETLVKQLTE-LKVTEEER--------ASVFKLKDEEIDRSEKKLENALVCKILSQKQINPNMFKSKMPRIWNQEHTTISKVGFNLFLCKFKNGRIKSLIE

Query:  DNGPWFFDKALLLFKEPRGGNYGEDIEFRS
        +NGPWFFDK++++ +EPR      ++EFR+
Subjt:  DNGPWFFDKALLLFKEPRGGNYGEDIEFRS

A0A6P9EGW2 uncharacterized protein LOC1183486452.4e-0833.88Show/hide
Query:  EETLVKQLTELKVTEEERASVFKLKDEEIDRSEKKLENALVCKILSQKQINPNMFKSKMPRIWNQE-HTTISKVGFNLFLCKFKNGRIKSLIEDNGPWFF
        EE +      LK+TEEE+   + LK+EEI  S     + LV  + + +++N   FK+ M R+WN E   T   +G N FL +F N  +++ +    PW F
Subjt:  EETLVKQLTELKVTEEERASVFKLKDEEIDRSEKKLENALVCKILSQKQINPNMFKSKMPRIWNQE-HTTISKVGFNLFLCKFKNGRIKSLIEDNGPWFF

Query:  DKALLLFKEPRGGNYGEDIEF
        D+ L+  +E +G    +DI+F
Subjt:  DKALLLFKEPRGGNYGEDIEF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G25640.2 detoxifying efflux carrier 353.6e-04100Show/hide
Query:  SGWPSGLRRQTQVLVFVRG
        SGWPSGLRRQTQVLVFVRG
Subjt:  SGWPSGLRRQTQVLVFVRG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCTTCGTGAGAGGGCATAACGGTGGAAGAAGGGCGGCCAGGGTGCCAGATTGGAGCAGTCAGAT
CTGCGTAGAGGTGGTGTTCCTGAGGCGGTGGTCTTCGGCTATTATTGTCATGGAAGGACAGAAGGATGAAGAAACGTTGGTCAAACAACTCACAGAGCTGAAGGTTACTG
AAGAAGAAAGAGCTAGTGTTTTCAAATTGAAAGATGAGGAAATTGATAGATCGGAGAAGAAGTTGGAGAATGCGTTGGTGTGCAAAATCCTTTCTCAGAAGCAAATTAAT
CCCAACATGTTCAAATCCAAGATGCCCCGAATATGGAACCAAGAACATACTACTATCAGTAAAGTGGGATTCAACTTGTTTCTGTGCAAGTTCAAGAACGGACGAATAAA
AAGTCTAATTGAGGACAATGGCCCTTGGTTTTTTGACAAAGCATTGTTACTGTTCAAGGAGCCAAGGGGGGGCAACTACGGGGAAGATATTGAGTTCAGGTCCATAGTTA
ATCAGGCTGGTCGTGGAAAAGGTCGAGGATGGGACGGCGGAAGAGGAGGGTGGAGAGGGATGCAACAAACAGACGAGGAGTCTGAGTTCGAGAAAAGAGAGAAGCTACCG
GTCAAAAAAGGGAAAGAATTTGAAGAAGTGGTGGGGCGGGGCCAACCATCCAAAAATGGGTCTTCCCCGATGAACATAACGGCAACGAACATTCCAACAGAGGCAACACC
GTCGATGGCTCCAATGGTCAAAATTACAGAAATGGAAACATTGGACAAAGAAACGGAGTCAAGGGGGGCGAAAATTAAGGAAGGAGAAATAAGTATGGCATTAAATGAGG
ATAATATCACAAAAGGAAATACTTGTATAAAGAATTCGGCTAGTGAATCTGGGAATAACGACCCAATTGAAAAGGAAAGTTATTGCTCAATTATGGAGGTTGATTTAGAT
GAGATTGGGTCAAAAGAGGAGAGTGGGTCAAAAGATGAGGAAAGGGTCAGTTCTATGGAGTCAACTTTTGCTTCTATTACAGGTCATTCACATGATCCCAAAGGAAAAGG
AACTCTGCTGGACAACCCTCGTAACAGCCGAGAGGGTCAGGGTAAAACTAAAGGTTGGAAACGTATCCCTCGTAATAAAATGGAAAGTGAACAATCAATGGAAAATTTGT
GA
mRNA sequenceShow/hide mRNA sequence
ATGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCTTCGTGAGAGGGCATAACGGTGGAAGAAGGGCGGCCAGGGTGCCAGATTGGAGCAGTCAGAT
CTGCGTAGAGGTGGTGTTCCTGAGGCGGTGGTCTTCGGCTATTATTGTCATGGAAGGACAGAAGGATGAAGAAACGTTGGTCAAACAACTCACAGAGCTGAAGGTTACTG
AAGAAGAAAGAGCTAGTGTTTTCAAATTGAAAGATGAGGAAATTGATAGATCGGAGAAGAAGTTGGAGAATGCGTTGGTGTGCAAAATCCTTTCTCAGAAGCAAATTAAT
CCCAACATGTTCAAATCCAAGATGCCCCGAATATGGAACCAAGAACATACTACTATCAGTAAAGTGGGATTCAACTTGTTTCTGTGCAAGTTCAAGAACGGACGAATAAA
AAGTCTAATTGAGGACAATGGCCCTTGGTTTTTTGACAAAGCATTGTTACTGTTCAAGGAGCCAAGGGGGGGCAACTACGGGGAAGATATTGAGTTCAGGTCCATAGTTA
ATCAGGCTGGTCGTGGAAAAGGTCGAGGATGGGACGGCGGAAGAGGAGGGTGGAGAGGGATGCAACAAACAGACGAGGAGTCTGAGTTCGAGAAAAGAGAGAAGCTACCG
GTCAAAAAAGGGAAAGAATTTGAAGAAGTGGTGGGGCGGGGCCAACCATCCAAAAATGGGTCTTCCCCGATGAACATAACGGCAACGAACATTCCAACAGAGGCAACACC
GTCGATGGCTCCAATGGTCAAAATTACAGAAATGGAAACATTGGACAAAGAAACGGAGTCAAGGGGGGCGAAAATTAAGGAAGGAGAAATAAGTATGGCATTAAATGAGG
ATAATATCACAAAAGGAAATACTTGTATAAAGAATTCGGCTAGTGAATCTGGGAATAACGACCCAATTGAAAAGGAAAGTTATTGCTCAATTATGGAGGTTGATTTAGAT
GAGATTGGGTCAAAAGAGGAGAGTGGGTCAAAAGATGAGGAAAGGGTCAGTTCTATGGAGTCAACTTTTGCTTCTATTACAGGTCATTCACATGATCCCAAAGGAAAAGG
AACTCTGCTGGACAACCCTCGTAACAGCCGAGAGGGTCAGGGTAAAACTAAAGGTTGGAAACGTATCCCTCGTAATAAAATGGAAAGTGAACAATCAATGGAAAATTTGT
GA
Protein sequenceShow/hide protein sequence
MSGWPSGLRRQTQVLVFVRGHNGGRRAARVPDWSSQICVEVVFLRRWSSAIIVMEGQKDEETLVKQLTELKVTEEERASVFKLKDEEIDRSEKKLENALVCKILSQKQIN
PNMFKSKMPRIWNQEHTTISKVGFNLFLCKFKNGRIKSLIEDNGPWFFDKALLLFKEPRGGNYGEDIEFRSIVNQAGRGKGRGWDGGRGGWRGMQQTDEESEFEKREKLP
VKKGKEFEEVVGRGQPSKNGSSPMNITATNIPTEATPSMAPMVKITEMETLDKETESRGAKIKEGEISMALNEDNITKGNTCIKNSASESGNNDPIEKESYCSIMEVDLD
EIGSKEESGSKDEERVSSMESTFASITGHSHDPKGKGTLLDNPRNSREGQGKTKGWKRIPRNKMESEQSMENL