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Spg028851 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028851
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H
Genome locationscaffold7:13000404..13002565
RNA-Seq ExpressionSpg028851
SyntenySpg028851
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]1.2e-1754.32Show/hide
Query:  KDHLRKFEKYTPTSVPQEQILMEIRNTNLLNVPRKLKSNPDKRDKSQYCLFHRDHGHSTKNCIQLKDKIEALIRNGYLKQF
        KD  +KFEKYT T+VP EQ+LMEI+N  LL  P ++ ++  KR K +YCLFH DHGH+T++C  LK+++E LI  GYLK++
Subjt:  KDHLRKFEKYTPTSVPQEQILMEIRNTNLLNVPRKLKSNPDKRDKSQYCLFHRDHGHSTKNCIQLKDKIEALIRNGYLKQF

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]1.5e-2059.26Show/hide
Query:  KDHLRKFEKYTPTSVPQEQILMEIRNTNLLNVPRKLKSNPDKRDKSQYCLFHRDHGHSTKNCIQLKDKIEALIRNGYLKQF
        KD  RKFEKYTPT+VP EQ+LMEI++  LL  P ++K++  KR K +YCLFHRDHGH+T++C  LK+++E LIR GYLK++
Subjt:  KDHLRKFEKYTPTSVPQEQILMEIRNTNLLNVPRKLKSNPDKRDKSQYCLFHRDHGHSTKNCIQLKDKIEALIRNGYLKQF

XP_022159079.1 uncharacterized protein LOC111025521 [Momordica charantia]9.2e-1848Show/hide
Query:  ADQTKDHLRKFEKYTPTSVPQEQILMEIRNT---NLLNVPRKLKSNPDKRDKSQYCLFHRDHGHSTKNCIQLKDKIEALIRNGYLKQFTTKCPRSSCEPK
        +D +++  R +E+YTPT++P  +IL  I  T    LL  P+KL+ +P+KR+K +YC FHRDHGH+T NC +LK +IE LI+ GY K+F  K   SS E K
Subjt:  ADQTKDHLRKFEKYTPTSVPQEQILMEIRNT---NLLNVPRKLKSNPDKRDKSQYCLFHRDHGHSTKNCIQLKDKIEALIRNGYLKQFTTKCPRSSCEPK

XP_022159192.1 uncharacterized protein LOC111025612 [Momordica charantia]8.9e-2160.49Show/hide
Query:  KDHLRKFEKYTPTSVPQEQILMEIRNTNLLNVPRKLKSNPDKRDKSQYCLFHRDHGHSTKNCIQLKDKIEALIRNGYLKQF
        KD  RKFEKYTPT+VP EQ+LMEI++  LL  P  +K+ P+KR K +YCLFHRDHGH+T +C  LK+++E LIR GYLK++
Subjt:  KDHLRKFEKYTPTSVPQEQILMEIRNTNLLNVPRKLKSNPDKRDKSQYCLFHRDHGHSTKNCIQLKDKIEALIRNGYLKQF

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]1.2e-1755.56Show/hide
Query:  KDHLRKFEKYTPTSVPQEQILMEIRNTNLLNVPRKLKSNPDKRDKSQYCLFHRDHGHSTKNCIQLKDKIEALIRNGYLKQF
        KD  RKFEKYTPT+VP EQ+LMEI++  LL  P ++K    KR K +YCLFHRDH H+T++   LK+++E LIR GYL+++
Subjt:  KDHLRKFEKYTPTSVPQEQILMEIRNTNLLNVPRKLKSNPDKRDKSQYCLFHRDHGHSTKNCIQLKDKIEALIRNGYLKQF

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128055.8e-1854.32Show/hide
Query:  KDHLRKFEKYTPTSVPQEQILMEIRNTNLLNVPRKLKSNPDKRDKSQYCLFHRDHGHSTKNCIQLKDKIEALIRNGYLKQF
        KD  +KFEKYT T+VP EQ+LMEI+N  LL  P ++ ++  KR K +YCLFH DHGH+T++C  LK+++E LI  GYLK++
Subjt:  KDHLRKFEKYTPTSVPQEQILMEIRNTNLLNVPRKLKSNPDKRDKSQYCLFHRDHGHSTKNCIQLKDKIEALIRNGYLKQF

A0A6J1DWY0 uncharacterized protein LOC1110252937.3e-2159.26Show/hide
Query:  KDHLRKFEKYTPTSVPQEQILMEIRNTNLLNVPRKLKSNPDKRDKSQYCLFHRDHGHSTKNCIQLKDKIEALIRNGYLKQF
        KD  RKFEKYTPT+VP EQ+LMEI++  LL  P ++K++  KR K +YCLFHRDHGH+T++C  LK+++E LIR GYLK++
Subjt:  KDHLRKFEKYTPTSVPQEQILMEIRNTNLLNVPRKLKSNPDKRDKSQYCLFHRDHGHSTKNCIQLKDKIEALIRNGYLKQF

A0A6J1DYL6 uncharacterized protein LOC1110257855.8e-1855.56Show/hide
Query:  KDHLRKFEKYTPTSVPQEQILMEIRNTNLLNVPRKLKSNPDKRDKSQYCLFHRDHGHSTKNCIQLKDKIEALIRNGYLKQF
        KD  RKFEKYTPT+VP EQ+LMEI++  LL  P ++K    KR K +YCLFHRDH H+T++   LK+++E LIR GYL+++
Subjt:  KDHLRKFEKYTPTSVPQEQILMEIRNTNLLNVPRKLKSNPDKRDKSQYCLFHRDHGHSTKNCIQLKDKIEALIRNGYLKQF

A0A6J1DZ52 uncharacterized protein LOC1110256124.3e-2160.49Show/hide
Query:  KDHLRKFEKYTPTSVPQEQILMEIRNTNLLNVPRKLKSNPDKRDKSQYCLFHRDHGHSTKNCIQLKDKIEALIRNGYLKQF
        KD  RKFEKYTPT+VP EQ+LMEI++  LL  P  +K+ P+KR K +YCLFHRDHGH+T +C  LK+++E LIR GYLK++
Subjt:  KDHLRKFEKYTPTSVPQEQILMEIRNTNLLNVPRKLKSNPDKRDKSQYCLFHRDHGHSTKNCIQLKDKIEALIRNGYLKQF

A0A6J1E1B3 uncharacterized protein LOC1110255214.5e-1848Show/hide
Query:  ADQTKDHLRKFEKYTPTSVPQEQILMEIRNT---NLLNVPRKLKSNPDKRDKSQYCLFHRDHGHSTKNCIQLKDKIEALIRNGYLKQFTTKCPRSSCEPK
        +D +++  R +E+YTPT++P  +IL  I  T    LL  P+KL+ +P+KR+K +YC FHRDHGH+T NC +LK +IE LI+ GY K+F  K   SS E K
Subjt:  ADQTKDHLRKFEKYTPTSVPQEQILMEIRNT---NLLNVPRKLKSNPDKRDKSQYCLFHRDHGHSTKNCIQLKDKIEALIRNGYLKQFTTKCPRSSCEPK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGAGGCCGACCAGACCAAGGATCACCTAAGGAAGTTTGAGAAGTATACTCCAACATCAGTCCCACAGGAGCAAATCTTGATGGAGATACGGAATACAAACCTGCT
CAACGTGCCTAGAAAGCTAAAGTCAAATCCTGACAAAAGAGACAAAAGCCAGTATTGTCTCTTCCATCGAGATCATGGACATTCAACTAAGAACTGCATTCAGCTAAAGG
ACAAAATTGAAGCGCTGATTCGGAACGGATACCTGAAGCAGTTCACCACTAAGTGCCCACGCTCATCATGTGAGCCTAAGCTTTTCAGCTTAGAGCCCACGCCTACATGC
GAGCCTAGGCTTCCATGCTTAGAGCCCACGCTACTGCACACGAGCCTGGACTACCGAGTCTACCTCACCTCATCTGAGTCGAGCTCACCTAGTCGAGGCCGAGGCCGAGC
ACAAACTTTAAAGATGAAATGCATTGAAGGTGCGATTGCACAGTTCAAGGCCTTGGATACAAATGGTCAAGGGTCGAATGTCGAGCTCCGTAGAGAGCATTGTGGCCCTA
GGTACAAATGGTCAGGGGACAGTGCGACTCGAAGAGTCAGGGATGCTTACCAGTATCATGGTTGTACTAACCCATTCCCCTCTCTCTCCCCCCAACTACCAGATTATGCA
GGTTATAAAACTGCCTTGACCATGGTGATGCAGAAGAGGCGCATGAGGAGAGACCATAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGAGGCCGACCAGACCAAGGATCACCTAAGGAAGTTTGAGAAGTATACTCCAACATCAGTCCCACAGGAGCAAATCTTGATGGAGATACGGAATACAAACCTGCT
CAACGTGCCTAGAAAGCTAAAGTCAAATCCTGACAAAAGAGACAAAAGCCAGTATTGTCTCTTCCATCGAGATCATGGACATTCAACTAAGAACTGCATTCAGCTAAAGG
ACAAAATTGAAGCGCTGATTCGGAACGGATACCTGAAGCAGTTCACCACTAAGTGCCCACGCTCATCATGTGAGCCTAAGCTTTTCAGCTTAGAGCCCACGCCTACATGC
GAGCCTAGGCTTCCATGCTTAGAGCCCACGCTACTGCACACGAGCCTGGACTACCGAGTCTACCTCACCTCATCTGAGTCGAGCTCACCTAGTCGAGGCCGAGGCCGAGC
ACAAACTTTAAAGATGAAATGCATTGAAGGTGCGATTGCACAGTTCAAGGCCTTGGATACAAATGGTCAAGGGTCGAATGTCGAGCTCCGTAGAGAGCATTGTGGCCCTA
GGTACAAATGGTCAGGGGACAGTGCGACTCGAAGAGTCAGGGATGCTTACCAGTATCATGGTTGTACTAACCCATTCCCCTCTCTCTCCCCCCAACTACCAGATTATGCA
GGTTATAAAACTGCCTTGACCATGGTGATGCAGAAGAGGCGCATGAGGAGAGACCATAGCTAG
Protein sequenceShow/hide protein sequence
MAEADQTKDHLRKFEKYTPTSVPQEQILMEIRNTNLLNVPRKLKSNPDKRDKSQYCLFHRDHGHSTKNCIQLKDKIEALIRNGYLKQFTTKCPRSSCEPKLFSLEPTPTC
EPRLPCLEPTLLHTSLDYRVYLTSSESSSPSRGRGRAQTLKMKCIEGAIAQFKALDTNGQGSNVELRREHCGPRYKWSGDSATRRVRDAYQYHGCTNPFPSLSPQLPDYA
GYKTALTMVMQKRRMRRDHS