; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg028858 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028858
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationscaffold7:15723793..15739925
RNA-Seq ExpressionSpg028858
SyntenySpg028858
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053731.1 uncharacterized protein E6C27_scaffold135G001080 [Cucumis melo var. makuwa]3.5e-3336.89Show/hide
Query:  DACEVQTKEVSAHPMKSKAPKEE-------ASSNVPILCYVPLSRRKKGESPFTECLGILKVGDVEILKENFITPLTTITK---QKIQES----------
        DA   Q    S    K +AP+ E         SN P+L Y+PLSRRKKGESPF EC   L V + EILKENFI PLT I K   +KI++           
Subjt:  DACEVQTKEVSAHPMKSKAPKEE-------ASSNVPILCYVPLSRRKKGESPFTECLGILKVGDVEILKENFITPLTTITK---QKIQES----------

Query:  ------------------------------------KTNRTKKKLQKEGYAIPSSRAGLGYNSPEPVRIT--RKWKVADAHHITIEEISDPEDKKDSNSQ
                                            + + T+ KLQK+GY+IP+SRAG+GY S EPVRIT   K KVA+  HIT+EE  D ++ K   SQ
Subjt:  ------------------------------------KTNRTKKKLQKEGYAIPSSRAGLGYNSPEPVRIT--RKWKVADAHHITIEEISDPEDKKDSNSQ

Query:  KISVFDCIIAPTTRLSVHQQLKYSPSEKKGQRKTYAPTRRSVFRCLSVSTSKKIDQPS------RSVFDRLQETNSQGKGKLKILKTEESDEMNDNNGFS
        + SVFD I     RLSV Q++  S ++   Q  T + TR S F+ L+ + +KK+   S      +S F  L+ + ++G+ K  I  + +S  +  +    
Subjt:  KISVFDCIIAPTTRLSVHQQLKYSPSEKKGQRKTYAPTRRSVFRCLSVSTSKKIDQPS------RSVFDRLQETNSQGKGKLKILKTEESDEMNDNNGFS

Query:  NTIPPRMKRKPFVLINTEDVLIQSVHVV
        +  P RMKRK FV +NTE  L    H V
Subjt:  NTIPPRMKRKPFVLINTEDVLIQSVHVV

KAA0053731.1 uncharacterized protein E6C27_scaffold135G001080 [Cucumis melo var. makuwa]3.2e-1037.93Show/hide
Query:  SEERMTEVEKKISM-TLEPIVIWLQQES------SSDIFQDQLESVENEDEGWTLVTRRKKQKKHFVQREPHMFRNYRRKNMSQKQKRKIKGSRKPKLVV
        S+ R++ +   I   +LE IVI+   E        +D  +++ + V+N +EGWTLVTRRKK+K+ F Q+E   +R YR K  SQ++  + K  RK   ++
Subjt:  SEERMTEVEKKISM-TLEPIVIWLQQES------SSDIFQDQLESVENEDEGWTLVTRRKKQKKHFVQREPHMFRNYRRKNMSQKQKRKIKGSRKPKLVV

Query:  EENQDFVLSRHPVTLKDFFPKNFLNNDHEDIFEIVACHAVNAFEE
        EE++     R P+ LKDFFPKNF         EI +CH  +  EE
Subjt:  EENQDFVLSRHPVTLKDFFPKNFLNNDHEDIFEIVACHAVNAFEE

KAA0055891.1 uncharacterized protein E6C27_scaffold438G00090 [Cucumis melo var. makuwa]2.1e-3329.66Show/hide
Query:  SEERMTEVEKKISM-TLEPIVIWLQQES------SSDIFQDQLESVENEDEGWTLVTRRKKQKKHFVQREPHMFRNYRRKNMSQKQKR------------
        S+ R++ +   I   +LEP+VI+   +        +D  +++ + V+N +EGWTLVTRR K+K+ F Q+E   +R YR K   ++QK             
Subjt:  SEERMTEVEKKISM-TLEPIVIWLQQES------SSDIFQDQLESVENEDEGWTLVTRRKKQKKHFVQREPHMFRNYRRKNMSQKQKR------------

Query:  ------------KIKGSRKPKLVVEE-NQ----------------DFVLSR--HPVTLKDFFPKNFLNND--HEDIFEIVACHAVNAFEEG-----DSSS
                     ++     KLV++  NQ                D  +S   H +  +  + K  L     HE+       H    F +      D+ S
Subjt:  ------------KIKGSRKPKLVVEE-NQ----------------DFVLSR--HPVTLKDFFPKNFLNND--HEDIFEIVACHAVNAFEEG-----DSSS

Query:  SPSQHPKN--------VKNESVEEV---------------------------DACEVQTKEVSAHPMKSKAPKEE-------ASSNVPILCYVPLSRRKK
         P    ++         K+E V E+                           DA   Q    S    K +AP+ E         SN+P+LCY+  SR KK
Subjt:  SPSQHPKN--------VKNESVEEV---------------------------DACEVQTKEVSAHPMKSKAPKEE-------ASSNVPILCYVPLSRRKK

Query:  GESPFTECLGILKVGDVEILKENFITPLTTITK---QKIQES----------------------------------------------KTNRTKKKLQKE
        GESPF EC   L V + EILKENF  PLT I K   +KI++                                               + + T+KKLQK+
Subjt:  GESPFTECLGILKVGDVEILKENFITPLTTITK---QKIQES----------------------------------------------KTNRTKKKLQKE

Query:  GYAIPSSRAGLGYNSPEPVRIT--RKWKVADAHHITIEEISDPEDKKDSNSQKISVFDCIIAPTTRLSVHQQLKYSPSEKKGQRKTYAPTRRSVFRCLSV
        GY+IP+SRAG+GY S EPVRIT  RK KVA+  HIT+EE  D E+ K+  SQ+ SVFD I     R SV Q++  S ++   Q  T + TR S F+ L+ 
Subjt:  GYAIPSSRAGLGYNSPEPVRIT--RKWKVADAHHITIEEISDPEDKKDSNSQKISVFDCIIAPTTRLSVHQQLKYSPSEKKGQRKTYAPTRRSVFRCLSV

Query:  STSKKIDQPS------RSVFDRLQETNSQGKGKLKILKTEESDEMNDNNGFSNTIPPRMKRKPFVLINTEDVLIQSVHVV
        + +KK+   S      +S F RL  + ++G+ K  I    +S  + ++    +  P RMKRK  V +NTE  L    H V
Subjt:  STSKKIDQPS------RSVFDRLQETNSQGKGKLKILKTEESDEMNDNNGFSNTIPPRMKRKPFVLINTEDVLIQSVHVV

KAA0061113.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.6e-4131.53Show/hide
Query:  EKKISMTLEPIVIWLQQESSSDIFQDQLESVENEDEGWTLVTRRKKQKKHFVQREPHMFRNYRRKNMSQKQKRKIKGSRKPKLVVEENQDFVLSRHPVTL
        EKKI + LE       +E + +  Q++   +E +DEGWT+VTRRKK+K   +Q+E  ++ NYRR N +QK K+K K +RK KLV E+++DF  ++  VTL
Subjt:  EKKISMTLEPIVIWLQQESSSDIFQDQLESVENEDEGWTLVTRRKKQKKHFVQREPHMFRNYRRKNMSQKQKRKIKGSRKPKLVVEENQDFVLSRHPVTL

Query:  KDFFPKNFLNNDHEDIFEIVA-----------------CHAVNAFEEG----------------------------DSSSSPSQHPKN------------
         DFFP  FL +  ++   +VA                 C +++  +E                             D+ S+ +  PK+            
Subjt:  KDFFPKNFLNNDHEDIFEIVA-----------------CHAVNAFEEG----------------------------DSSSSPSQHPKN------------

Query:  -----------------------VKNESVEEVDACEVQ----------------------------TKEVSAHPMKSKAPKEEASSNVPILCYVPLSRRK
                               +KN+   EV + EV                               E S    KS    +E +SN PIL YVPLSRRK
Subjt:  -----------------------VKNESVEEVDACEVQ----------------------------TKEVSAHPMKSKAPKEEASSNVPILCYVPLSRRK

Query:  KGESPFTECLGILKVGDVEILKENFITPLTTITKQKI---------------------------------------------QESKTNRTKKKLQKEGYA
        KGESPF E    LKVGD+E+LKE+F TPLT ITKQ+I                                             ++ K + T+KKL +EG+A
Subjt:  KGESPFTECLGILKVGDVEILKENFITPLTTITKQKI---------------------------------------------QESKTNRTKKKLQKEGYA

Query:  IPSSRAGLGYNSPEPVRITRKW--KVADAHHITIEEISDPEDKKDSNSQKISVFDCIIAPTTRLSVHQQLKYSPSEKKGQRKTYAPTRRSVFRCLSVS
        IP SR GLGY  PEP+RITRK   KV D++HIT++E+ D  ++K+ +SQ+ S FD +     R  V ++L    +E+K  + T +  RRS F+ L+++
Subjt:  IPSSRAGLGYNSPEPVRITRKW--KVADAHHITIEEISDPEDKKDSNSQKISVFDCIIAPTTRLSVHQQLKYSPSEKKGQRKTYAPTRRSVFRCLSVS

TYK05005.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.6e-4127.07Show/hide
Query:  SEERMTEVEKKISMTLEPIVIWLQQESSSDIFQDQLESVENEDEGWTLVTRRKKQKKHFVQREPHMFRNYRRKNMSQKQKRKIKGSRKPKLVVEENQDFV
        + E+  E++ +   T EP+V+   QE + +  Q++   +E +DE WT+VTRRKK+K   +Q+E   +RNYRR N +QK K+K K +RK KL+ +E++DF 
Subjt:  SEERMTEVEKKISMTLEPIVIWLQQESSSDIFQDQLESVENEDEGWTLVTRRKKQKKHFVQREPHMFRNYRRKNMSQKQKRKIKGSRKPKLVVEENQDFV

Query:  LSRHPVTLKDFFPKNFLNNDHEDIFEIVACHAVNAFEEG-------------------------------------------------------------
         ++  +TL DFFP  FL +  ++   +VACHA+NA EE                                                              
Subjt:  LSRHPVTLKDFFPKNFLNNDHEDIFEIVACHAVNAFEEG-------------------------------------------------------------

Query:  ------------------------------------DSSSSPSQHPKN----------------------------------------------------
                                            D+ S+ +  PK+                                                    
Subjt:  ------------------------------------DSSSSPSQHPKN----------------------------------------------------

Query:  ----VKNESVEEVDACEV----------------------------QTKEVSAHPMKSKAPKEEASSNVPILCYVPLSRRKKGESPFTECLGILKVGDVE
            +KN+S  EV + EV                            +  E S    KS    +E +SN  IL YVPLSRRKKGESPF E    LKVGD+E
Subjt:  ----VKNESVEEVDACEV----------------------------QTKEVSAHPMKSKAPKEEASSNVPILCYVPLSRRKKGESPFTECLGILKVGDVE

Query:  ILKENFITPLTTITKQKI---------------------------------------------QESKTNRTKKKLQKEGYAIPSSRAGLGYNSPEPVRIT
        +LKE+F TPLT ITKQ+I                                             ++ K + T+KKL +EG+AIP SR GLGY  PEP+RIT
Subjt:  ILKENFITPLTTITKQKI---------------------------------------------QESKTNRTKKKLQKEGYAIPSSRAGLGYNSPEPVRIT

Query:  RKW--KVADAHHITIEEISDPEDKKDSNSQKISVFDCIIAPTTRLSVHQQLKYSPSEKKGQRKTYAPTRRSVFRCLSVSTSKKIDQPSRSVFDRLQE--T
        RK   K+ D++HIT++E+ D   +K+ +SQ+ S FD I     R  V ++L  + +E+K  + T    RRS F  LS++  K    P   + +RL +   
Subjt:  RKW--KVADAHHITIEEISDPEDKKDSNSQKISVFDCIIAPTTRLSVHQQLKYSPSEKKGQRKTYAPTRRSVFRCLSVSTSKKIDQPSRSVFDRLQE--T

Query:  NSQGKGKLKILKTEESD-----------------------EMNDNNGFSNTIPPRMKRKPFVLIN
        + Q    + I K E +                        E+       + +P RMKRK FV +N
Subjt:  NSQGKGKLKILKTEESD-----------------------EMNDNNGFSNTIPPRMKRKPFVLIN

TYK06199.1 uncharacterized protein E5676_scaffold287G00570 [Cucumis melo var. makuwa]3.8e-3528.89Show/hide
Query:  SEERMTEVEKKISM-TLEPIVIWLQQES------SSDIFQDQLESVENEDEGWTLVTRRKKQKKHFVQREPHMFRNYRRKNMSQKQK-------------
        S+ R++ +   I   +LEP+VI+   +        +D  +++ + V+N +EGWTLVTRR K+K+ F Q+E   +R YR K   ++QK             
Subjt:  SEERMTEVEKKISM-TLEPIVIWLQQES------SSDIFQDQLESVENEDEGWTLVTRRKKQKKHFVQREPHMFRNYRRKNMSQKQK-------------

Query:  -------------------------------RKIKGSRKPKLVVEE---NQDFVLSRHPVTLKDFFPKNFLNNDHEDIFEIVACHAVNAF-----EEGDS
                                       ++  G+ + ++V+E+   +  F +     T K    + ++   HE+       H    F      + D+
Subjt:  -------------------------------RKIKGSRKPKLVVEE---NQDFVLSRHPVTLKDFFPKNFLNNDHEDIFEIVACHAVNAF-----EEGDS

Query:  SSSPSQHPKN--------VKNESVEEV---------------------------DACEVQTKEVSAHPMKSKAPKEE-------ASSNVPILCYVPLSRR
         S P    ++         K+E V E+                           DA   Q    S    K +AP+ E         SN+P+LCY+P SR 
Subjt:  SSSPSQHPKN--------VKNESVEEV---------------------------DACEVQTKEVSAHPMKSKAPKEE-------ASSNVPILCYVPLSRR

Query:  KKGESPFTECLGILKVGDVEILKENFITPLTTITK---QKIQES----------------------------------------------KTNRTKKKLQ
        KKGESPF ECL  L V + EILKENF  PLT I K   +KI++                                               + + T+KKLQ
Subjt:  KKGESPFTECLGILKVGDVEILKENFITPLTTITK---QKIQES----------------------------------------------KTNRTKKKLQ

Query:  KEGYAIPSSRAGLGYNSPEPVRITRKW--KVADAHHITIEEISDPEDKKDSNSQKISVFDCIIAPTTRLSVHQQLKYSPSEKKGQRKTYAPTRRSVFRCL
        K+GY+IP+SRAG+GY+S EPVRIT K   KVA+  HIT+EE  D E+ K   SQ+ SVFD I     R SV Q++  S ++   Q  T + TR S F+ L
Subjt:  KEGYAIPSSRAGLGYNSPEPVRITRKW--KVADAHHITIEEISDPEDKKDSNSQKISVFDCIIAPTTRLSVHQQLKYSPSEKKGQRKTYAPTRRSVFRCL

Query:  SVSTSKKIDQPS------RSVFDRLQETNSQGKGKLKILKTEESDEMNDNNGFSNTIPPRMKRKPFVLINTEDVLIQSVHVVDISFSAVNQP
        + S +KK+   S      +S F RL  + ++ + K  +  + +S  +  +    +  P RMKRK FV +NTE  L    H V  +    N+P
Subjt:  SVSTSKKIDQPS------RSVFDRLQETNSQGKGKLKILKTEESDEMNDNNGFSNTIPPRMKRKPFVLINTEDVLIQSVHVVDISFSAVNQP

TrEMBL top hitse value%identityAlignment
A0A5A7UQP2 Integrase catalytic domain-containing protein1.0e-3329.66Show/hide
Query:  SEERMTEVEKKISM-TLEPIVIWLQQES------SSDIFQDQLESVENEDEGWTLVTRRKKQKKHFVQREPHMFRNYRRKNMSQKQKR------------
        S+ R++ +   I   +LEP+VI+   +        +D  +++ + V+N +EGWTLVTRR K+K+ F Q+E   +R YR K   ++QK             
Subjt:  SEERMTEVEKKISM-TLEPIVIWLQQES------SSDIFQDQLESVENEDEGWTLVTRRKKQKKHFVQREPHMFRNYRRKNMSQKQKR------------

Query:  ------------KIKGSRKPKLVVEE-NQ----------------DFVLSR--HPVTLKDFFPKNFLNND--HEDIFEIVACHAVNAFEEG-----DSSS
                     ++     KLV++  NQ                D  +S   H +  +  + K  L     HE+       H    F +      D+ S
Subjt:  ------------KIKGSRKPKLVVEE-NQ----------------DFVLSR--HPVTLKDFFPKNFLNND--HEDIFEIVACHAVNAFEEG-----DSSS

Query:  SPSQHPKN--------VKNESVEEV---------------------------DACEVQTKEVSAHPMKSKAPKEE-------ASSNVPILCYVPLSRRKK
         P    ++         K+E V E+                           DA   Q    S    K +AP+ E         SN+P+LCY+  SR KK
Subjt:  SPSQHPKN--------VKNESVEEV---------------------------DACEVQTKEVSAHPMKSKAPKEE-------ASSNVPILCYVPLSRRKK

Query:  GESPFTECLGILKVGDVEILKENFITPLTTITK---QKIQES----------------------------------------------KTNRTKKKLQKE
        GESPF EC   L V + EILKENF  PLT I K   +KI++                                               + + T+KKLQK+
Subjt:  GESPFTECLGILKVGDVEILKENFITPLTTITK---QKIQES----------------------------------------------KTNRTKKKLQKE

Query:  GYAIPSSRAGLGYNSPEPVRIT--RKWKVADAHHITIEEISDPEDKKDSNSQKISVFDCIIAPTTRLSVHQQLKYSPSEKKGQRKTYAPTRRSVFRCLSV
        GY+IP+SRAG+GY S EPVRIT  RK KVA+  HIT+EE  D E+ K+  SQ+ SVFD I     R SV Q++  S ++   Q  T + TR S F+ L+ 
Subjt:  GYAIPSSRAGLGYNSPEPVRIT--RKWKVADAHHITIEEISDPEDKKDSNSQKISVFDCIIAPTTRLSVHQQLKYSPSEKKGQRKTYAPTRRSVFRCLSV

Query:  STSKKIDQPS------RSVFDRLQETNSQGKGKLKILKTEESDEMNDNNGFSNTIPPRMKRKPFVLINTEDVLIQSVHVV
        + +KK+   S      +S F RL  + ++G+ K  I    +S  + ++    +  P RMKRK  V +NTE  L    H V
Subjt:  STSKKIDQPS------RSVFDRLQETNSQGKGKLKILKTEESDEMNDNNGFSNTIPPRMKRKPFVLINTEDVLIQSVHVV

A0A5D3BG93 Ty3-gypsy retrotransposon protein3.8e-3331.59Show/hide
Query:  EKKISMTLEPIVIWLQQESSSDIFQDQLESVENEDEGWTLVTRRKKQKKHFVQREPHMFRNYRRKNMSQKQKRKIKGSRKPKLVVEENQDFVLSRHPVTL
        EKKI +        L+++ + +  Q++   +E +DEGWT+VTRRKK+K   +Q+E   +RNY R N +Q  K+K K +RK KLV EE++DF  ++  VTL
Subjt:  EKKISMTLEPIVIWLQQESSSDIFQDQLESVENEDEGWTLVTRRKKQKKHFVQREPHMFRNYRRKNMSQKQKRKIKGSRKPKLVVEENQDFVLSRHPVTL

Query:  KDFFPKNFLNNDHEDIFEIVACHAVNAFEE-------------------------------------------GDSSSSPSQHPKN--------------
         DFFP  FL +  ++   +VAC A+NA +E                                             SSS+P+   +N              
Subjt:  KDFFPKNFLNNDHEDIFEIVACHAVNAFEE-------------------------------------------GDSSSSPSQHPKN--------------

Query:  --------------------------------------------VKNESVEEVDACEV---------QTKEV-SAHPMKS----KAPKEEAS--------
                                                    +KN+S  E    EV         Q K + S  P KS     + K EAS        
Subjt:  --------------------------------------------VKNESVEEVDACEV---------QTKEV-SAHPMKS----KAPKEEAS--------

Query:  ------SNVPILCYVPLSRRKKGESPFTECLGILKVGDVEILKENFITPLTTITKQKIQ------------------------------------ESKTN
              SN PIL YV LSR KKG+SPF +    LKVGD+E+LKE+F TPLT +T QKI+                                    E K+ 
Subjt:  ------SNVPILCYVPLSRRKKGESPFTECLGILKVGDVEILKENFITPLTTITKQKIQ------------------------------------ESKTN

Query:  RTKKKLQKEGYAIPSSRAGLGYNSPEPVRITRKW--KVADAHHITIEEISDPEDKKDSNSQKISVFDCIIAPTTRLSV
        +T+KKL +EG+AIP SR GL Y SPE +RITRK   KV D++HIT++E+ D  ++K+ +SQ+ S FD I     R  V
Subjt:  RTKKKLQKEGYAIPSSRAGLGYNSPEPVRITRKW--KVADAHHITIEEISDPEDKKDSNSQKISVFDCIIAPTTRLSV

A0A5D3BY54 Ty3-gypsy retrotransposon protein7.7e-4231.53Show/hide
Query:  EKKISMTLEPIVIWLQQESSSDIFQDQLESVENEDEGWTLVTRRKKQKKHFVQREPHMFRNYRRKNMSQKQKRKIKGSRKPKLVVEENQDFVLSRHPVTL
        EKKI + LE       +E + +  Q++   +E +DEGWT+VTRRKK+K   +Q+E  ++ NYRR N +QK K+K K +RK KLV E+++DF  ++  VTL
Subjt:  EKKISMTLEPIVIWLQQESSSDIFQDQLESVENEDEGWTLVTRRKKQKKHFVQREPHMFRNYRRKNMSQKQKRKIKGSRKPKLVVEENQDFVLSRHPVTL

Query:  KDFFPKNFLNNDHEDIFEIVA-----------------CHAVNAFEEG----------------------------DSSSSPSQHPKN------------
         DFFP  FL +  ++   +VA                 C +++  +E                             D+ S+ +  PK+            
Subjt:  KDFFPKNFLNNDHEDIFEIVA-----------------CHAVNAFEEG----------------------------DSSSSPSQHPKN------------

Query:  -----------------------VKNESVEEVDACEVQ----------------------------TKEVSAHPMKSKAPKEEASSNVPILCYVPLSRRK
                               +KN+   EV + EV                               E S    KS    +E +SN PIL YVPLSRRK
Subjt:  -----------------------VKNESVEEVDACEVQ----------------------------TKEVSAHPMKSKAPKEEASSNVPILCYVPLSRRK

Query:  KGESPFTECLGILKVGDVEILKENFITPLTTITKQKI---------------------------------------------QESKTNRTKKKLQKEGYA
        KGESPF E    LKVGD+E+LKE+F TPLT ITKQ+I                                             ++ K + T+KKL +EG+A
Subjt:  KGESPFTECLGILKVGDVEILKENFITPLTTITKQKI---------------------------------------------QESKTNRTKKKLQKEGYA

Query:  IPSSRAGLGYNSPEPVRITRKW--KVADAHHITIEEISDPEDKKDSNSQKISVFDCIIAPTTRLSVHQQLKYSPSEKKGQRKTYAPTRRSVFRCLSVS
        IP SR GLGY  PEP+RITRK   KV D++HIT++E+ D  ++K+ +SQ+ S FD +     R  V ++L    +E+K  + T +  RRS F+ L+++
Subjt:  IPSSRAGLGYNSPEPVRITRKW--KVADAHHITIEEISDPEDKKDSNSQKISVFDCIIAPTTRLSVHQQLKYSPSEKKGQRKTYAPTRRSVFRCLSVS

A0A5D3C0W6 Ty3-gypsy retrotransposon protein7.7e-4227.07Show/hide
Query:  SEERMTEVEKKISMTLEPIVIWLQQESSSDIFQDQLESVENEDEGWTLVTRRKKQKKHFVQREPHMFRNYRRKNMSQKQKRKIKGSRKPKLVVEENQDFV
        + E+  E++ +   T EP+V+   QE + +  Q++   +E +DE WT+VTRRKK+K   +Q+E   +RNYRR N +QK K+K K +RK KL+ +E++DF 
Subjt:  SEERMTEVEKKISMTLEPIVIWLQQESSSDIFQDQLESVENEDEGWTLVTRRKKQKKHFVQREPHMFRNYRRKNMSQKQKRKIKGSRKPKLVVEENQDFV

Query:  LSRHPVTLKDFFPKNFLNNDHEDIFEIVACHAVNAFEEG-------------------------------------------------------------
         ++  +TL DFFP  FL +  ++   +VACHA+NA EE                                                              
Subjt:  LSRHPVTLKDFFPKNFLNNDHEDIFEIVACHAVNAFEEG-------------------------------------------------------------

Query:  ------------------------------------DSSSSPSQHPKN----------------------------------------------------
                                            D+ S+ +  PK+                                                    
Subjt:  ------------------------------------DSSSSPSQHPKN----------------------------------------------------

Query:  ----VKNESVEEVDACEV----------------------------QTKEVSAHPMKSKAPKEEASSNVPILCYVPLSRRKKGESPFTECLGILKVGDVE
            +KN+S  EV + EV                            +  E S    KS    +E +SN  IL YVPLSRRKKGESPF E    LKVGD+E
Subjt:  ----VKNESVEEVDACEV----------------------------QTKEVSAHPMKSKAPKEEASSNVPILCYVPLSRRKKGESPFTECLGILKVGDVE

Query:  ILKENFITPLTTITKQKI---------------------------------------------QESKTNRTKKKLQKEGYAIPSSRAGLGYNSPEPVRIT
        +LKE+F TPLT ITKQ+I                                             ++ K + T+KKL +EG+AIP SR GLGY  PEP+RIT
Subjt:  ILKENFITPLTTITKQKI---------------------------------------------QESKTNRTKKKLQKEGYAIPSSRAGLGYNSPEPVRIT

Query:  RKW--KVADAHHITIEEISDPEDKKDSNSQKISVFDCIIAPTTRLSVHQQLKYSPSEKKGQRKTYAPTRRSVFRCLSVSTSKKIDQPSRSVFDRLQE--T
        RK   K+ D++HIT++E+ D   +K+ +SQ+ S FD I     R  V ++L  + +E+K  + T    RRS F  LS++  K    P   + +RL +   
Subjt:  RKW--KVADAHHITIEEISDPEDKKDSNSQKISVFDCIIAPTTRLSVHQQLKYSPSEKKGQRKTYAPTRRSVFRCLSVSTSKKIDQPSRSVFDRLQE--T

Query:  NSQGKGKLKILKTEESD-----------------------EMNDNNGFSNTIPPRMKRKPFVLIN
        + Q    + I K E +                        E+       + +P RMKRK FV +N
Subjt:  NSQGKGKLKILKTEESD-----------------------EMNDNNGFSNTIPPRMKRKPFVLIN

A0A5D3C783 Ribonuclease H1.8e-3528.89Show/hide
Query:  SEERMTEVEKKISM-TLEPIVIWLQQES------SSDIFQDQLESVENEDEGWTLVTRRKKQKKHFVQREPHMFRNYRRKNMSQKQK-------------
        S+ R++ +   I   +LEP+VI+   +        +D  +++ + V+N +EGWTLVTRR K+K+ F Q+E   +R YR K   ++QK             
Subjt:  SEERMTEVEKKISM-TLEPIVIWLQQES------SSDIFQDQLESVENEDEGWTLVTRRKKQKKHFVQREPHMFRNYRRKNMSQKQK-------------

Query:  -------------------------------RKIKGSRKPKLVVEE---NQDFVLSRHPVTLKDFFPKNFLNNDHEDIFEIVACHAVNAF-----EEGDS
                                       ++  G+ + ++V+E+   +  F +     T K    + ++   HE+       H    F      + D+
Subjt:  -------------------------------RKIKGSRKPKLVVEE---NQDFVLSRHPVTLKDFFPKNFLNNDHEDIFEIVACHAVNAF-----EEGDS

Query:  SSSPSQHPKN--------VKNESVEEV---------------------------DACEVQTKEVSAHPMKSKAPKEE-------ASSNVPILCYVPLSRR
         S P    ++         K+E V E+                           DA   Q    S    K +AP+ E         SN+P+LCY+P SR 
Subjt:  SSSPSQHPKN--------VKNESVEEV---------------------------DACEVQTKEVSAHPMKSKAPKEE-------ASSNVPILCYVPLSRR

Query:  KKGESPFTECLGILKVGDVEILKENFITPLTTITK---QKIQES----------------------------------------------KTNRTKKKLQ
        KKGESPF ECL  L V + EILKENF  PLT I K   +KI++                                               + + T+KKLQ
Subjt:  KKGESPFTECLGILKVGDVEILKENFITPLTTITK---QKIQES----------------------------------------------KTNRTKKKLQ

Query:  KEGYAIPSSRAGLGYNSPEPVRITRKW--KVADAHHITIEEISDPEDKKDSNSQKISVFDCIIAPTTRLSVHQQLKYSPSEKKGQRKTYAPTRRSVFRCL
        K+GY+IP+SRAG+GY+S EPVRIT K   KVA+  HIT+EE  D E+ K   SQ+ SVFD I     R SV Q++  S ++   Q  T + TR S F+ L
Subjt:  KEGYAIPSSRAGLGYNSPEPVRITRKW--KVADAHHITIEEISDPEDKKDSNSQKISVFDCIIAPTTRLSVHQQLKYSPSEKKGQRKTYAPTRRSVFRCL

Query:  SVSTSKKIDQPS------RSVFDRLQETNSQGKGKLKILKTEESDEMNDNNGFSNTIPPRMKRKPFVLINTEDVLIQSVHVVDISFSAVNQP
        + S +KK+   S      +S F RL  + ++ + K  +  + +S  +  +    +  P RMKRK FV +NTE  L    H V  +    N+P
Subjt:  SVSTSKKIDQPS------RSVFDRLQETNSQGKGKLKILKTEESDEMNDNNGFSNTIPPRMKRKPFVLINTEDVLIQSVHVVDISFSAVNQP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGAGACGCATGACAGAATCTGCTCAACTTGAAATCGCCACTGTAGAAAATCTCATGCTTGGCAAATTCATCTCTCCTTCTAAGCAACCAAATGAAACATCAAGTCC
TGACGTAATGTCTGTTATGATGACTGATGTAGGAACTAGTGAAGAACGGATGACTGAAGTTGAGAAGAAAATCAGCATGACATTAGAGCCGATTGTTATTTGGCTTCAAC
AAGAATCTTCAAGTGACATCTTCCAAGACCAACTTGAGTCTGTTGAAAATGAAGACGAAGGATGGACTTTGGTAACTCGTCGAAAGAAGCAAAAGAAACATTTCGTTCAA
AGAGAGCCTCACATGTTCCGAAACTACAGAAGAAAGAACATGTCACAAAAGCAGAAGAGAAAGATAAAAGGTTCAAGAAAACCTAAACTAGTTGTCGAAGAGAATCAAGA
TTTTGTTTTGTCTCGACATCCAGTAACCCTTAAAGACTTCTTCCCAAAGAACTTTCTTAATAACGATCATGAGGATATCTTTGAGATAGTCGCGTGTCATGCTGTCAATG
CATTCGAAGAAGGCGATTCTTCCTCAAGTCCATCTCAGCATCCAAAGAATGTGAAGAATGAGTCAGTTGAAGAGGTAGATGCTTGTGAAGTTCAAACAAAGGAAGTATCT
GCCCATCCTATGAAATCAAAGGCTCCAAAGGAAGAGGCGTCGTCAAATGTCCCTATATTGTGCTACGTTCCTTTATCTCGGCGCAAGAAGGGGGAATCACCATTCACAGA
ATGTTTAGGAATTTTGAAAGTTGGTGATGTGGAGATTCTAAAAGAAAATTTCATCACACCTCTTACAACAATTACCAAGCAAAAGATTCAGGAATCAAAGACTAATCGTA
CCAAAAAAAAACTCCAAAAAGAAGGTTACGCCATACCATCCTCGAGAGCCGGACTAGGGTACAATTCCCCAGAGCCAGTTCGTATAACCAGAAAATGGAAAGTGGCAGAT
GCACATCACATAACGATAGAAGAGATAAGTGATCCAGAAGATAAGAAGGACAGTAATAGCCAGAAAATATCTGTCTTCGATTGCATTATAGCTCCGACTACTCGTCTTTC
AGTTCATCAGCAGTTGAAATATTCACCTTCAGAAAAGAAAGGTCAGAGAAAAACTTATGCTCCTACTCGACGCTCAGTGTTTCGTTGTTTAAGTGTGTCTACATCAAAGA
AAATAGATCAGCCTTCGAGATCCGTGTTCGATCGCCTTCAAGAAACAAATAGCCAAGGCAAGGGAAAGTTGAAAATTCTCAAAACAGAAGAATCCGATGAAATGAATGAT
AACAACGGTTTTTCCAATACTATTCCTCCACGGATGAAGAGAAAACCTTTTGTTCTCATAAATACAGAAGACGTATTGATCCAAAGCGTCCATGTAGTAGACATCTCGTT
TTCGGCCGTGAATCAGCCGAATCTCGCCGTTTCTCACTGTGGGTTGCAAAGTTTCAGGATTTTCTGCATTGTTGGGGCGATTTCTTCAGCATTTTGGTCGTGGTACGCTC
TTGTGCATTATTTAGAGCTTGTGGACTCATTTGCTGATGTATTAAGTTCTCTTGCTGCTGTTTTTACATTATATCTGAGGCGGACGGGCTATTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGAGACGCATGACAGAATCTGCTCAACTTGAAATCGCCACTGTAGAAAATCTCATGCTTGGCAAATTCATCTCTCCTTCTAAGCAACCAAATGAAACATCAAGTCC
TGACGTAATGTCTGTTATGATGACTGATGTAGGAACTAGTGAAGAACGGATGACTGAAGTTGAGAAGAAAATCAGCATGACATTAGAGCCGATTGTTATTTGGCTTCAAC
AAGAATCTTCAAGTGACATCTTCCAAGACCAACTTGAGTCTGTTGAAAATGAAGACGAAGGATGGACTTTGGTAACTCGTCGAAAGAAGCAAAAGAAACATTTCGTTCAA
AGAGAGCCTCACATGTTCCGAAACTACAGAAGAAAGAACATGTCACAAAAGCAGAAGAGAAAGATAAAAGGTTCAAGAAAACCTAAACTAGTTGTCGAAGAGAATCAAGA
TTTTGTTTTGTCTCGACATCCAGTAACCCTTAAAGACTTCTTCCCAAAGAACTTTCTTAATAACGATCATGAGGATATCTTTGAGATAGTCGCGTGTCATGCTGTCAATG
CATTCGAAGAAGGCGATTCTTCCTCAAGTCCATCTCAGCATCCAAAGAATGTGAAGAATGAGTCAGTTGAAGAGGTAGATGCTTGTGAAGTTCAAACAAAGGAAGTATCT
GCCCATCCTATGAAATCAAAGGCTCCAAAGGAAGAGGCGTCGTCAAATGTCCCTATATTGTGCTACGTTCCTTTATCTCGGCGCAAGAAGGGGGAATCACCATTCACAGA
ATGTTTAGGAATTTTGAAAGTTGGTGATGTGGAGATTCTAAAAGAAAATTTCATCACACCTCTTACAACAATTACCAAGCAAAAGATTCAGGAATCAAAGACTAATCGTA
CCAAAAAAAAACTCCAAAAAGAAGGTTACGCCATACCATCCTCGAGAGCCGGACTAGGGTACAATTCCCCAGAGCCAGTTCGTATAACCAGAAAATGGAAAGTGGCAGAT
GCACATCACATAACGATAGAAGAGATAAGTGATCCAGAAGATAAGAAGGACAGTAATAGCCAGAAAATATCTGTCTTCGATTGCATTATAGCTCCGACTACTCGTCTTTC
AGTTCATCAGCAGTTGAAATATTCACCTTCAGAAAAGAAAGGTCAGAGAAAAACTTATGCTCCTACTCGACGCTCAGTGTTTCGTTGTTTAAGTGTGTCTACATCAAAGA
AAATAGATCAGCCTTCGAGATCCGTGTTCGATCGCCTTCAAGAAACAAATAGCCAAGGCAAGGGAAAGTTGAAAATTCTCAAAACAGAAGAATCCGATGAAATGAATGAT
AACAACGGTTTTTCCAATACTATTCCTCCACGGATGAAGAGAAAACCTTTTGTTCTCATAAATACAGAAGACGTATTGATCCAAAGCGTCCATGTAGTAGACATCTCGTT
TTCGGCCGTGAATCAGCCGAATCTCGCCGTTTCTCACTGTGGGTTGCAAAGTTTCAGGATTTTCTGCATTGTTGGGGCGATTTCTTCAGCATTTTGGTCGTGGTACGCTC
TTGTGCATTATTTAGAGCTTGTGGACTCATTTGCTGATGTATTAAGTTCTCTTGCTGCTGTTTTTACATTATATCTGAGGCGGACGGGCTATTTTTGA
Protein sequenceShow/hide protein sequence
MLRRMTESAQLEIATVENLMLGKFISPSKQPNETSSPDVMSVMMTDVGTSEERMTEVEKKISMTLEPIVIWLQQESSSDIFQDQLESVENEDEGWTLVTRRKKQKKHFVQ
REPHMFRNYRRKNMSQKQKRKIKGSRKPKLVVEENQDFVLSRHPVTLKDFFPKNFLNNDHEDIFEIVACHAVNAFEEGDSSSSPSQHPKNVKNESVEEVDACEVQTKEVS
AHPMKSKAPKEEASSNVPILCYVPLSRRKKGESPFTECLGILKVGDVEILKENFITPLTTITKQKIQESKTNRTKKKLQKEGYAIPSSRAGLGYNSPEPVRITRKWKVAD
AHHITIEEISDPEDKKDSNSQKISVFDCIIAPTTRLSVHQQLKYSPSEKKGQRKTYAPTRRSVFRCLSVSTSKKIDQPSRSVFDRLQETNSQGKGKLKILKTEESDEMND
NNGFSNTIPPRMKRKPFVLINTEDVLIQSVHVVDISFSAVNQPNLAVSHCGLQSFRIFCIVGAISSAFWSWYALVHYLELVDSFADVLSSLAAVFTLYLRRTGYF