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Spg028891 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028891
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGag-protease polyprotein
Genome locationscaffold5:15181212..15190556
RNA-Seq ExpressionSpg028891
SyntenySpg028891
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032973.1 hypothetical protein E6C27_scaffold269G00560 [Cucumis melo var. makuwa]8.9e-0558Show/hide
Query:  MNNLFVVQPSNRNPSRASERVGPFVQDPETPRKGTLIYFLKSQAGVNSIL
        +NNLF VQP N+NPSRA+E VGP VQD ++  KGT     +   GVNSIL
Subjt:  MNNLFVVQPSNRNPSRASERVGPFVQDPETPRKGTLIYFLKSQAGVNSIL
KAA0047518.1 gag-protease polyprotein [Cucumis melo var. makuwa]1.5e-0754.1Show/hide
Query:  MNNLFVVQPSNRNPSRASERVGPFVQDPETPRKGTLIYFLKSQAGVNSILCDYVPSSPLGL
        +NN F VQP N+NPSRA+E+VGP VQD ++  KGT     +   GVN  L  YVPS PLG+
Subjt:  MNNLFVVQPSNRNPSRASERVGPFVQDPETPRKGTLIYFLKSQAGVNSILCDYVPSSPLGL
KAA0048214.1 hypothetical protein E6C27_scaffold63G001280 [Cucumis melo var. makuwa]1.5e-0456Show/hide
Query:  MNNLFVVQPSNRNPSRASERVGPFVQDPETPRKGTLIYFLKSQAGVNSIL
        +NN F VQP N+NPSRA+E+VGP VQD ++  KGT     +   GVNSIL
Subjt:  MNNLFVVQPSNRNPSRASERVGPFVQDPETPRKGTLIYFLKSQAGVNSIL
KAA0050441.1 hypothetical protein E6C27_scaffold175G00400 [Cucumis melo var. makuwa]1.2e-0454Show/hide
Query:  MNNLFVVQPSNRNPSRASERVGPFVQDPETPRKGTLIYFLKSQAGVNSIL
        +NN F VQP+N NPSRA+E+VGP VQD ++  KGT     +   GVNS+L
Subjt:  MNNLFVVQPSNRNPSRASERVGPFVQDPETPRKGTLIYFLKSQAGVNSIL
KAA0062482.1 hypothetical protein E6C27_scaffold130G00760 [Cucumis melo var. makuwa]2.0e-0456Show/hide
Query:  MNNLFVVQPSNRNPSRASERVGPFVQDPETPRKGTLIYFLKSQAGVNSIL
        +NN F VQP N+NPS A+E+VGPFVQD ++  KGT     +   GVNSIL
Subjt:  MNNLFVVQPSNRNPSRASERVGPFVQDPETPRKGTLIYFLKSQAGVNSIL
TrEMBL top hitse value%identityAlignment
A0A5A7SRB7 Uncharacterized protein4.3e-0558Show/hide
Query:  MNNLFVVQPSNRNPSRASERVGPFVQDPETPRKGTLIYFLKSQAGVNSIL
        +NNLF VQP N+NPSRA+E VGP VQD ++  KGT     +   GVNSIL
Subjt:  MNNLFVVQPSNRNPSRASERVGPFVQDPETPRKGTLIYFLKSQAGVNSIL
A0A5A7UA81 Uncharacterized protein5.6e-0554Show/hide
Query:  MNNLFVVQPSNRNPSRASERVGPFVQDPETPRKGTLIYFLKSQAGVNSIL
        +NN F VQP+N NPSRA+E+VGP VQD ++  KGT     +   GVNS+L
Subjt:  MNNLFVVQPSNRNPSRASERVGPFVQDPETPRKGTLIYFLKSQAGVNSIL
A0A5A7V2N8 Uncharacterized protein9.5e-0556Show/hide
Query:  MNNLFVVQPSNRNPSRASERVGPFVQDPETPRKGTLIYFLKSQAGVNSIL
        +NN F VQP N+NPS A+E+VGPFVQD ++  KGT     +   GVNSIL
Subjt:  MNNLFVVQPSNRNPSRASERVGPFVQDPETPRKGTLIYFLKSQAGVNSIL
A0A5D3C9R3 Uncharacterized protein7.3e-0556Show/hide
Query:  MNNLFVVQPSNRNPSRASERVGPFVQDPETPRKGTLIYFLKSQAGVNSIL
        +NN F VQP N+NPSRA+E+VGP VQD ++  KGT     +   GVNSIL
Subjt:  MNNLFVVQPSNRNPSRASERVGPFVQDPETPRKGTLIYFLKSQAGVNSIL
A0A5D3DRY2 Gag-protease polyprotein7.1e-0854.1Show/hide
Query:  MNNLFVVQPSNRNPSRASERVGPFVQDPETPRKGTLIYFLKSQAGVNSILCDYVPSSPLGL
        +NN F VQP N+NPSRA+E+VGP VQD ++  KGT     +   GVN  L  YVPS PLG+
Subjt:  MNNLFVVQPSNRNPSRASERVGPFVQDPETPRKGTLIYFLKSQAGVNSILCDYVPSSPLGL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAACCTGTTTGTGGTCCAACCATCAAATAGAAACCCCTCTCGGGCCAGTGAAAGGGTAGGGCCCTTTGTTCAAGACCCGGAGACACCACGTAAGGGAACACTCAT
CTACTTCCTCAAAAGTCAGGCAGGAGTGAATTCCATCTTGTGTGATTATGTTCCCAGCTCCCCACTCGGTCTTGTCCCCAAAATGGATACCCTCACTCGCATGTCTACTA
CATGGACGCTTTGGATCAATACGTCTGCATCAAATACAAAGCGAGTCGTATCACATAGTGTTACCAGGATAAGCTCCCCACTCGGTCTTGTCCCCAAAATGAATATATTG
CTGAGCGACTTGAGGGAGCAAAATCTGCGCTGCAGCAAAGCAGGGAGCAGAACTGCCACGTCACAGCTCGTTAGCCATTTTAATGAGCCGAAGTTTGAGCCCAACAGTGA
CTATGAATCAAGTATTCAGGTAGAATCGCCATTCTTCACAAATTATGCTTCCAAGACTAGAGTTCACGGTGTTACGAATCCTATGATCGGGCCCTCCGAAGGGATGGTTG
CTCTAGGACAACATGCAGGCGGATCATATGACTCTCACAGTGTGACCTATGGGTGGAGATCGAGGAATACGTTGATACGTGTCCCGCTCCCACTAACTATGGGCACTTTT
CCCATTCACCTTGTTATTGACCCATGCAAACACTTTTCGAAGGGAGGCAGCGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACAACCTGTTTGTGGTCCAACCATCAAATAGAAACCCCTCTCGGGCCAGTGAAAGGGTAGGGCCCTTTGTTCAAGACCCGGAGACACCACGTAAGGGAACACTCAT
CTACTTCCTCAAAAGTCAGGCAGGAGTGAATTCCATCTTGTGTGATTATGTTCCCAGCTCCCCACTCGGTCTTGTCCCCAAAATGGATACCCTCACTCGCATGTCTACTA
CATGGACGCTTTGGATCAATACGTCTGCATCAAATACAAAGCGAGTCGTATCACATAGTGTTACCAGGATAAGCTCCCCACTCGGTCTTGTCCCCAAAATGAATATATTG
CTGAGCGACTTGAGGGAGCAAAATCTGCGCTGCAGCAAAGCAGGGAGCAGAACTGCCACGTCACAGCTCGTTAGCCATTTTAATGAGCCGAAGTTTGAGCCCAACAGTGA
CTATGAATCAAGTATTCAGGTAGAATCGCCATTCTTCACAAATTATGCTTCCAAGACTAGAGTTCACGGTGTTACGAATCCTATGATCGGGCCCTCCGAAGGGATGGTTG
CTCTAGGACAACATGCAGGCGGATCATATGACTCTCACAGTGTGACCTATGGGTGGAGATCGAGGAATACGTTGATACGTGTCCCGCTCCCACTAACTATGGGCACTTTT
CCCATTCACCTTGTTATTGACCCATGCAAACACTTTTCGAAGGGAGGCAGCGCTTAA
Protein sequenceShow/hide protein sequence
MNNLFVVQPSNRNPSRASERVGPFVQDPETPRKGTLIYFLKSQAGVNSILCDYVPSSPLGLVPKMDTLTRMSTTWTLWINTSASNTKRVVSHSVTRISSPLGLVPKMNIL
LSDLREQNLRCSKAGSRTATSQLVSHFNEPKFEPNSDYESSIQVESPFFTNYASKTRVHGVTNPMIGPSEGMVALGQHAGGSYDSHSVTYGWRSRNTLIRVPLPLTMGTF
PIHLVIDPCKHFSKGGSA