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Spg028893 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028893
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold5:16152214..16154307
RNA-Seq ExpressionSpg028893
SyntenySpg028893
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAGCGGAAGCGACGCGGCTGGGCGAATGGTGTAAGCGGAGAAGGGGAGCGCGGCTGGGTGTTTTCTGTCGAGAGAGAGGAGAAAGAGAGGGCGAGAGTTCTGAG
GGAAACACACGGAATCAGTGGAGCATATCTTTTGGGGTTGGGTCAGTGGACAGCGCGAGACCATTGGAGGTGGATGGAAGAAAATCTCGGAACTGAAGATCTGGAGAAAG
CGATCTTAGTTCTATGGAGTTTATGGAACCAGAGAAACCCAACAATCCAGTCGAATCAAGATCCCGATTTCAAATATCTAACAAGGGCGGTTAATGCAAACATCAAGGAG
GAGAAAAAGAGAGTTTCCGCTAACCTGTTCAGCCTTTCAGTGTCTCAACCCCTCAGGATCGGAGAGCCTCTCGAGTCATGCATCGTGGGAGCCGCCCCCAGCAGGATCTC
CAATCTGTGGAGGATTGAAGAGGATCAACTCAAGCTGGTCCATCAAAATGCTGGAGATGAAGGCTATTCTAGAAGGGCTGAAGAGTTTACAGTCCAAGTCGATTTGAAAT
TCCCTAGTATTATAGTGGAATCAGACGCCGTCGGAGTGATCAAAATGCTCAACGGCGAAGAAGAGGATCTTTCGGAAGTGGCGTTCTTAGCGGCCGAGATCTCTCTTGCG
AAATCCTCGTTTGAGGATATCCGTTTTGTTCATGCTCCCCGTGCCCCGTGGATAAGACGGAACGTATTTTTGGATAGGGCCCCGCCTTCTCAGGTTGTTGGGCTCGTTAA
TTCGTTTGGTGTGGTTGCCCGTTTGGGCTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAGCGGAAGCGACGCGGCTGGGCGAATGGTGTAAGCGGAGAAGGGGAGCGCGGCTGGGTGTTTTCTGTCGAGAGAGAGGAGAAAGAGAGGGCGAGAGTTCTGAG
GGAAACACACGGAATCAGTGGAGCATATCTTTTGGGGTTGGGTCAGTGGACAGCGCGAGACCATTGGAGGTGGATGGAAGAAAATCTCGGAACTGAAGATCTGGAGAAAG
CGATCTTAGTTCTATGGAGTTTATGGAACCAGAGAAACCCAACAATCCAGTCGAATCAAGATCCCGATTTCAAATATCTAACAAGGGCGGTTAATGCAAACATCAAGGAG
GAGAAAAAGAGAGTTTCCGCTAACCTGTTCAGCCTTTCAGTGTCTCAACCCCTCAGGATCGGAGAGCCTCTCGAGTCATGCATCGTGGGAGCCGCCCCCAGCAGGATCTC
CAATCTGTGGAGGATTGAAGAGGATCAACTCAAGCTGGTCCATCAAAATGCTGGAGATGAAGGCTATTCTAGAAGGGCTGAAGAGTTTACAGTCCAAGTCGATTTGAAAT
TCCCTAGTATTATAGTGGAATCAGACGCCGTCGGAGTGATCAAAATGCTCAACGGCGAAGAAGAGGATCTTTCGGAAGTGGCGTTCTTAGCGGCCGAGATCTCTCTTGCG
AAATCCTCGTTTGAGGATATCCGTTTTGTTCATGCTCCCCGTGCCCCGTGGATAAGACGGAACGTATTTTTGGATAGGGCCCCGCCTTCTCAGGTTGTTGGGCTCGTTAA
TTCGTTTGGTGTGGTTGCCCGTTTGGGCTCTTAA
Protein sequenceShow/hide protein sequence
MEERKRRGWANGVSGEGERGWVFSVEREEKERARVLRETHGISGAYLLGLGQWTARDHWRWMEENLGTEDLEKAILVLWSLWNQRNPTIQSNQDPDFKYLTRAVNANIKE
EKKRVSANLFSLSVSQPLRIGEPLESCIVGAAPSRISNLWRIEEDQLKLVHQNAGDEGYSRRAEEFTVQVDLKFPSIIVESDAVGVIKMLNGEEEDLSEVAFLAAEISLA
KSSFEDIRFVHAPRAPWIRRNVFLDRAPPSQVVGLVNSFGVVARLGS