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Spg028896 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028896
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold5:16391801..16392079
RNA-Seq ExpressionSpg028896
SyntenySpg028896
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053873.1 hypothetical protein E6C27_scaffold135G002660 [Cucumis melo var. makuwa]2.3e-0954.95Show/hide
Query:  MAGMQYNFFPTDFYYPRPPPPSPPNSVQISVKAPPSAVIPPPTKITVLEDQEPDQSLDKPKSSSSSMAIKKKVVRASTSMAFLPPPSYILK
        MAGM  NFFPTDFYYPR    + P+  QI+ K         P   TV +D+E ++ L+K   S SS+AI+KK+V ASTSMAFLPPPSYILK
Subjt:  MAGMQYNFFPTDFYYPRPPPPSPPNSVQISVKAPPSAVIPPPTKITVLEDQEPDQSLDKPKSSSSSMAIKKKVVRASTSMAFLPPPSYILK

KAG6580888.1 hypothetical protein SDJN03_20890, partial [Cucurbita argyrosperma subsp. sororia]2.5e-1657.45Show/hide
Query:  MAGMQYNFFPTDFYYPR--PPPPSPPNSVQISVKAPPSAVIPPPTKITVLEDQEPDQSLDKPKSSSSSMAIKKKVVRASTSMAFLPPPSYILKS
        MAGMQYNFFPTDFYYPR  PPPP PPNSV++    P    +         ED++ +QS+D+PK+S +SMA+ K VV AS S AFLPPPS+ILK+
Subjt:  MAGMQYNFFPTDFYYPR--PPPPSPPNSVQISVKAPPSAVIPPPTKITVLEDQEPDQSLDKPKSSSSSMAIKKKVVRASTSMAFLPPPSYILKS

WP_217833416.1 hypothetical protein, partial [Synechococcus sp. PCC 7002]6.2e-1572.15Show/hide
Query:  RPPPPSPPNSVQISVKAPPSAVIPPPTKITVLEDQEPDQSLDKPKSS----SSSMAIKKKVVRASTSMAFLPPPSYILK
        RPP PSPPNSVQIS +  PS V+PPP K TV +D+E D SLDKPK+S    SSSMAI  KVV ASTSMAFLPPPSYILK
Subjt:  RPPPPSPPNSVQISVKAPPSAVIPPPTKITVLEDQEPDQSLDKPKSS----SSSMAIKKKVVRASTSMAFLPPPSYILK

TrEMBL top hitse value%identityAlignment
A0A5A7UD60 Uncharacterized protein1.1e-0954.95Show/hide
Query:  MAGMQYNFFPTDFYYPRPPPPSPPNSVQISVKAPPSAVIPPPTKITVLEDQEPDQSLDKPKSSSSSMAIKKKVVRASTSMAFLPPPSYILK
        MAGM  NFFPTDFYYPR    + P+  QI+ K         P   TV +D+E ++ L+K   S SS+AI+KK+V ASTSMAFLPPPSYILK
Subjt:  MAGMQYNFFPTDFYYPRPPPPSPPNSVQISVKAPPSAVIPPPTKITVLEDQEPDQSLDKPKSSSSSMAIKKKVVRASTSMAFLPPPSYILK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGAATGCAATACAACTTCTTCCCTACAGATTTCTACTACCCTCGTCCGCCTCCGCCATCGCCACCTAACTCCGTTCAAATCTCCGTCAAAGCGCCGCCGTCTGC
AGTCATTCCTCCGCCGACCAAAATTACAGTACTTGAAGATCAAGAACCCGACCAGTCCCTTGACAAACCCAAGTCGTCGTCGTCGTCGATGGCTATTAAGAAGAAGGTGG
TTAGAGCTTCCACTTCCATGGCGTTTCTTCCTCCTCCCTCTTACATCCTCAAAAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGGAATGCAATACAACTTCTTCCCTACAGATTTCTACTACCCTCGTCCGCCTCCGCCATCGCCACCTAACTCCGTTCAAATCTCCGTCAAAGCGCCGCCGTCTGC
AGTCATTCCTCCGCCGACCAAAATTACAGTACTTGAAGATCAAGAACCCGACCAGTCCCTTGACAAACCCAAGTCGTCGTCGTCGTCGATGGCTATTAAGAAGAAGGTGG
TTAGAGCTTCCACTTCCATGGCGTTTCTTCCTCCTCCCTCTTACATCCTCAAAAGCTGA
Protein sequenceShow/hide protein sequence
MAGMQYNFFPTDFYYPRPPPPSPPNSVQISVKAPPSAVIPPPTKITVLEDQEPDQSLDKPKSSSSSMAIKKKVVRASTSMAFLPPPSYILKS