; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg028897 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028897
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGag-protease polyprotein
Genome locationscaffold5:15160324..15169914
RNA-Seq ExpressionSpg028897
SyntenySpg028897
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032973.1 hypothetical protein E6C27_scaffold269G00560 [Cucumis melo var. makuwa]2.1e-0557.69Show/hide
Query:  PLMNNLFVIQPSNRNPSRASERVGPFVQHPETPLKGTLIYFLKSQEGVNSIL
        PL+NNLF +QP N+NPSRA+E VGP VQ  ++ LKGT     +   GVNSIL
Subjt:  PLMNNLFVIQPSNRNPSRASERVGPFVQHPETPLKGTLIYFLKSQEGVNSIL

KAA0050441.1 hypothetical protein E6C27_scaffold175G00400 [Cucumis melo var. makuwa]2.8e-0553.85Show/hide
Query:  PLMNNLFVIQPSNRNPSRASERVGPFVQHPETPLKGTLIYFLKSQEGVNSIL
        PL+NN F +QP+N NPSRA+E+VGP VQ  ++ LKGT     +   GVNS+L
Subjt:  PLMNNLFVIQPSNRNPSRASERVGPFVQHPETPLKGTLIYFLKSQEGVNSIL

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.2e-0831.01Show/hide
Query:  MLLIFAILRSLSIDVGKIISNEIYNCWSKKVGKLFFPNTITMLCSRAGMPTVPKDVIFLDKGIIDT-----------------PNLARLQRTLEARQGGL
        MLL+ ++L   SI+VG++I +EI  C ++K G LFFP+ IT LC  A  P +  +    + G ID                  P+ +R       R  G 
Subjt:  MLLIFAILRSLSIDVGKIISNEIYNCWSKKVGKLFFPNTITMLCSRAGMPTVPKDVIFLDKGIIDT-----------------PNLARLQRTLEARQGGL

Query:  VCGIHQILEQSALSASRQEF--------AERQAQTYWTYAKRRDDTLRRALQSNFSKP
        +    + LEQ       Q++          +Q Q +W Y+K RD  L++ALQ+NF++P
Subjt:  VCGIHQILEQSALSASRQEF--------AERQAQTYWTYAKRRDDTLRRALQSNFSKP

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]4.1e-0931.01Show/hide
Query:  MLLIFAILRSLSIDVGKIISNEIYNCWSKKVGKLFFPNTITMLCSRAGMPTVPKDVIFLDKGIIDTPNLARLQR-----------------TLEARQGGL
        MLL++++L   SI+VG++I +EI  C ++K G LFFP+ IT LC  A  P +  +      G ID   +AR+ +                    +R  G 
Subjt:  MLLIFAILRSLSIDVGKIISNEIYNCWSKKVGKLFFPNTITMLCSRAGMPTVPKDVIFLDKGIIDTPNLARLQR-----------------TLEARQGGL

Query:  VCGIHQILEQSALSASRQEF--------AERQAQTYWTYAKRRDDTLRRALQSNFSKP
        +    + LEQ       Q++          +Q Q +W Y+K RD  L++ALQ+NF++P
Subjt:  VCGIHQILEQSALSASRQEF--------AERQAQTYWTYAKRRDDTLRRALQSNFSKP

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]6.4e-1034.67Show/hide
Query:  MLLIFAILRSLSIDVGKIISNEIYNCWSKKVGKLFFPNTITMLCSRAGMPTVPKDVIFLDKGIIDT-----------------PNLARLQRTLEARQGGL
        MLL+ ++L   SI+VG++I +EI  C ++K G LFFP+ IT LC  A  P +  +    + G ID                  P+ +R      +R  G 
Subjt:  MLLIFAILRSLSIDVGKIISNEIYNCWSKKVGKLFFPNTITMLCSRAGMPTVPKDVIFLDKGIIDT-----------------PNLARLQRTLEARQGGL

Query:  VCGIHQILEQSALSASRQEFAERQAQTYWTYAKRRDDTLRRALQSNFSKP
        V    + LEQ     S+QE   +Q Q +W Y+K RD  L++ALQ+NF++P
Subjt:  VCGIHQILEQSALSASRQEFAERQAQTYWTYAKRRDDTLRRALQSNFSKP

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)5.8e-0931.01Show/hide
Query:  MLLIFAILRSLSIDVGKIISNEIYNCWSKKVGKLFFPNTITMLCSRAGMPTVPKDVIFLDKGIIDT-----------------PNLARLQRTLEARQGGL
        MLL+ ++L   SI+VG++I +EI  C ++K G LFFP+ IT LC  A  P +  +    + G ID                  P+ +R       R  G 
Subjt:  MLLIFAILRSLSIDVGKIISNEIYNCWSKKVGKLFFPNTITMLCSRAGMPTVPKDVIFLDKGIIDT-----------------PNLARLQRTLEARQGGL

Query:  VCGIHQILEQSALSASRQEF--------AERQAQTYWTYAKRRDDTLRRALQSNFSKP
        +    + LEQ       Q++          +Q Q +W Y+K RD  L++ALQ+NF++P
Subjt:  VCGIHQILEQSALSASRQEF--------AERQAQTYWTYAKRRDDTLRRALQSNFSKP

A0A2P5CEY2 Uncharacterized protein2.0e-0931.01Show/hide
Query:  MLLIFAILRSLSIDVGKIISNEIYNCWSKKVGKLFFPNTITMLCSRAGMPTVPKDVIFLDKGIIDTPNLARLQR-----------------TLEARQGGL
        MLL++++L   SI+VG++I +EI  C ++K G LFFP+ IT LC  A  P +  +      G ID   +AR+ +                    +R  G 
Subjt:  MLLIFAILRSLSIDVGKIISNEIYNCWSKKVGKLFFPNTITMLCSRAGMPTVPKDVIFLDKGIIDTPNLARLQR-----------------TLEARQGGL

Query:  VCGIHQILEQSALSASRQEF--------AERQAQTYWTYAKRRDDTLRRALQSNFSKP
        +    + LEQ       Q++          +Q Q +W Y+K RD  L++ALQ+NF++P
Subjt:  VCGIHQILEQSALSASRQEF--------AERQAQTYWTYAKRRDDTLRRALQSNFSKP

A0A2P5DXM3 Uncharacterized protein3.1e-1034.67Show/hide
Query:  MLLIFAILRSLSIDVGKIISNEIYNCWSKKVGKLFFPNTITMLCSRAGMPTVPKDVIFLDKGIIDT-----------------PNLARLQRTLEARQGGL
        MLL+ ++L   SI+VG++I +EI  C ++K G LFFP+ IT LC  A  P +  +    + G ID                  P+ +R      +R  G 
Subjt:  MLLIFAILRSLSIDVGKIISNEIYNCWSKKVGKLFFPNTITMLCSRAGMPTVPKDVIFLDKGIIDT-----------------PNLARLQRTLEARQGGL

Query:  VCGIHQILEQSALSASRQEFAERQAQTYWTYAKRRDDTLRRALQSNFSKP
        V    + LEQ     S+QE   +Q Q +W Y+K RD  L++ALQ+NF++P
Subjt:  VCGIHQILEQSALSASRQEFAERQAQTYWTYAKRRDDTLRRALQSNFSKP

A0A5A7SRB7 Uncharacterized protein1.0e-0557.69Show/hide
Query:  PLMNNLFVIQPSNRNPSRASERVGPFVQHPETPLKGTLIYFLKSQEGVNSIL
        PL+NNLF +QP N+NPSRA+E VGP VQ  ++ LKGT     +   GVNSIL
Subjt:  PLMNNLFVIQPSNRNPSRASERVGPFVQHPETPLKGTLIYFLKSQEGVNSIL

A0A5A7UA81 Uncharacterized protein1.3e-0553.85Show/hide
Query:  PLMNNLFVIQPSNRNPSRASERVGPFVQHPETPLKGTLIYFLKSQEGVNSIL
        PL+NN F +QP+N NPSRA+E+VGP VQ  ++ LKGT     +   GVNS+L
Subjt:  PLMNNLFVIQPSNRNPSRASERVGPFVQHPETPLKGTLIYFLKSQEGVNSIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCTGATATTCGCAATTCTTCGATCTTTAAGTATTGATGTTGGAAAAATCATTTCGAATGAAATTTATAATTGTTGGAGTAAAAAGGTGGGGAAGTTGTTTTTCCC
GAATACGATCACAATGTTGTGTAGCAGGGCAGGAATGCCCACGGTTCCAAAGGATGTGATTTTTCTTGACAAGGGGATAATAGATACGCCTAATCTGGCTCGGCTTCAGC
GCACGCTGGAGGCACGCCAGGGTGGGTTAGTGTGTGGAATACATCAAATCCTAGAGCAGTCGGCACTGTCGGCCAGTAGGCAAGAATTTGCTGAGAGGCAAGCTCAAACT
TACTGGACCTATGCTAAAAGGAGAGATGACACACTTCGGAGGGCCTTGCAATCCAATTTCTCCAAACCGTGTCAGCAGTCCTTGGTTTTGCAGAATGCTCAGAATATATT
GCTGAGCGAGTTGAGGGAGCAAAATCTGCGCTGTAGCAAAGCAGGGAGCAAAACTTGTTGGGATTGTTCTCTCATCTCTCATTCTTCTCCATTGCTTGATGCTTCAAGCA
TTCCCTTCCCATTCCCTATCTTATATAGACTCCCACAAGTCGTTCTTGGCTCGGAGTATAGTAGGGAAGACTCTAGAGGAGTAAAATTTAATGTCTTAAGTGCTTTCGAT
CTTCAATTGCTTCCGCATGTTCGTCGCAGCGTCGCGACGCTACATGGACAGCGTCGCGACGCTACATGGACAGCGTCGCGACGCTACCCAATTTCTGGATCCTTCTCGCA
CTCAGTGACGTCATCATTTTCTTGCCGCTCAAGATGGTGCAGCATCGCGACGCTACATGGAAAACGTCGCGACGCTGTCGCGATTCCAGAACTCTCCGCGCGGTTGCCAA
GCGTCGAGACGCTCCGGCCTAGCGTCGAGATGCTAGGCCTCATGGGACCTAATGGACCTACAGATCAGAAGCTCCAACGATACGAGACTAATCGGCTTAAACTCATTAAC
CAAGTTAGTCTCCATTCGTTAACTGTGGGTCATTCCACTAAAGACCCTCAGCTGCACTCTTCTCACTGCAGAATATTTCTGTGTCCACGGATATCGACCAATACTACAAG
TCAGTCCTTCACGTGTGTTCTGGGACCTAATGGACCTACAGATCAGAAGCTCCAACGATACGAGACTAATTGGCTAAACTCATTAACCAATGCTCCTCTAATGAACAACC
TGTTTGTGATCCAACCATCAAACAGAAACCCCTCTCGGGCCAGTGAGAGGGTAGGGCCCTTTGTTCAACATCCGGAGACACCACTTAAGGGAACACTCATCTACTTCCTC
AAAAGTCAGGAAGGAGTGAATTCCATCTTGTGTGATTATACTCATTGCCTAGGATACCCCCACTCACATGTCTACTACATGGACGCTTTGGATGAATACGTCTGTATCAA
ATACAAAGCAGGCCGTATCACATAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTCTGATATTCGCAATTCTTCGATCTTTAAGTATTGATGTTGGAAAAATCATTTCGAATGAAATTTATAATTGTTGGAGTAAAAAGGTGGGGAAGTTGTTTTTCCC
GAATACGATCACAATGTTGTGTAGCAGGGCAGGAATGCCCACGGTTCCAAAGGATGTGATTTTTCTTGACAAGGGGATAATAGATACGCCTAATCTGGCTCGGCTTCAGC
GCACGCTGGAGGCACGCCAGGGTGGGTTAGTGTGTGGAATACATCAAATCCTAGAGCAGTCGGCACTGTCGGCCAGTAGGCAAGAATTTGCTGAGAGGCAAGCTCAAACT
TACTGGACCTATGCTAAAAGGAGAGATGACACACTTCGGAGGGCCTTGCAATCCAATTTCTCCAAACCGTGTCAGCAGTCCTTGGTTTTGCAGAATGCTCAGAATATATT
GCTGAGCGAGTTGAGGGAGCAAAATCTGCGCTGTAGCAAAGCAGGGAGCAAAACTTGTTGGGATTGTTCTCTCATCTCTCATTCTTCTCCATTGCTTGATGCTTCAAGCA
TTCCCTTCCCATTCCCTATCTTATATAGACTCCCACAAGTCGTTCTTGGCTCGGAGTATAGTAGGGAAGACTCTAGAGGAGTAAAATTTAATGTCTTAAGTGCTTTCGAT
CTTCAATTGCTTCCGCATGTTCGTCGCAGCGTCGCGACGCTACATGGACAGCGTCGCGACGCTACATGGACAGCGTCGCGACGCTACCCAATTTCTGGATCCTTCTCGCA
CTCAGTGACGTCATCATTTTCTTGCCGCTCAAGATGGTGCAGCATCGCGACGCTACATGGAAAACGTCGCGACGCTGTCGCGATTCCAGAACTCTCCGCGCGGTTGCCAA
GCGTCGAGACGCTCCGGCCTAGCGTCGAGATGCTAGGCCTCATGGGACCTAATGGACCTACAGATCAGAAGCTCCAACGATACGAGACTAATCGGCTTAAACTCATTAAC
CAAGTTAGTCTCCATTCGTTAACTGTGGGTCATTCCACTAAAGACCCTCAGCTGCACTCTTCTCACTGCAGAATATTTCTGTGTCCACGGATATCGACCAATACTACAAG
TCAGTCCTTCACGTGTGTTCTGGGACCTAATGGACCTACAGATCAGAAGCTCCAACGATACGAGACTAATTGGCTAAACTCATTAACCAATGCTCCTCTAATGAACAACC
TGTTTGTGATCCAACCATCAAACAGAAACCCCTCTCGGGCCAGTGAGAGGGTAGGGCCCTTTGTTCAACATCCGGAGACACCACTTAAGGGAACACTCATCTACTTCCTC
AAAAGTCAGGAAGGAGTGAATTCCATCTTGTGTGATTATACTCATTGCCTAGGATACCCCCACTCACATGTCTACTACATGGACGCTTTGGATGAATACGTCTGTATCAA
ATACAAAGCAGGCCGTATCACATAG
Protein sequenceShow/hide protein sequence
MLLIFAILRSLSIDVGKIISNEIYNCWSKKVGKLFFPNTITMLCSRAGMPTVPKDVIFLDKGIIDTPNLARLQRTLEARQGGLVCGIHQILEQSALSASRQEFAERQAQT
YWTYAKRRDDTLRRALQSNFSKPCQQSLVLQNAQNILLSELREQNLRCSKAGSKTCWDCSLISHSSPLLDASSIPFPFPILYRLPQVVLGSEYSREDSRGVKFNVLSAFD
LQLLPHVRRSVATLHGQRRDATWTASRRYPISGSFSHSVTSSFSCRSRWCSIATLHGKRRDAVAIPELSARLPSVETLRPSVEMLGLMGPNGPTDQKLQRYETNRLKLIN
QVSLHSLTVGHSTKDPQLHSSHCRIFLCPRISTNTTSQSFTCVLGPNGPTDQKLQRYETNWLNSLTNAPLMNNLFVIQPSNRNPSRASERVGPFVQHPETPLKGTLIYFL
KSQEGVNSILCDYTHCLGYPHSHVYYMDALDEYVCIKYKAGRIT