; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg028914 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028914
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionAminoacyl-tRNA hydrolase
Genome locationscaffold5:14240640..14242039
RNA-Seq ExpressionSpg028914
SyntenySpg028914
Gene Ontology termsGO:0004045 - aminoacyl-tRNA hydrolase activity (molecular function)
InterPro domainsIPR002833 - Peptidyl-tRNA hydrolase, PTH2
IPR023476 - Peptidyl-tRNA hydrolase II domain superfamily
IPR042237 - Putative peptidyl-tRNA hydrolase PTRHD1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585426.1 putative peptidyl-tRNA hydrolase PTRHD1, partial [Cucurbita argyrosperma subsp. sororia]5.2e-8387.23Show/hide
Query:  MTSVISASRFTLSIPNSTRLCSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SVISASRFT SI NS+RLC  ARVW  SS+ LRS N NS  FSSASMSES ES+S+LPLDDGGAKAEE  DVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVISASRFTLSIPNSTRLCSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSTFFKKLKLS
        ASVSAIWLNKDDPHTSEYCSP+NIDSMHKVTLEVKGETQI+NLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVS FFKKLKLS
Subjt:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSTFFKKLKLS

XP_022951520.1 putative peptidyl-tRNA hydrolase PTRHD1 isoform X1 [Cucurbita moschata]3.1e-8387.3Show/hide
Query:  MTSVISASRFTLSIPNSTRLCSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SVISASRFT SI NS RLC  ARVW  SS+ LRS N NS  FSSASMSES ESNS+LPLDDGGAKAEE  DVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVISASRFTLSIPNSTRLCSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSTFFKKLKLSK
        ASVSAIWLNKDDPHTSEYCSP+NIDSMHKVTLEVKGETQI+NLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVS FFKKLKL K
Subjt:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSTFFKKLKLSK

XP_023002512.1 putative peptidyl-tRNA hydrolase PTRHD1 isoform X1 [Cucurbita maxima]1.4e-8387.3Show/hide
Query:  MTSVISASRFTLSIPNSTRLCSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SVISASRFT SI NS RLCS ARVW  SS+ L S N NS  FSSASMSES ESNS+LPLDDGGAKAEE  DVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVISASRFTLSIPNSTRLCSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSTFFKKLKLSK
        ASVSAIWLNKDDPHTSEYCSP+NIDSMHKVTLEVKGETQI+NLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVS FFKKLKL K
Subjt:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSTFFKKLKLSK

XP_023002513.1 putative peptidyl-tRNA hydrolase PTRHD1 isoform X2 [Cucurbita maxima]3.1e-8387.7Show/hide
Query:  MTSVISASRFTLSIPNSTRLCSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SVISASRFT SI NS RLCS ARVW  SS+ L S N NS  FSSASMSES ESNS+LPLDDGGAKAEE  DVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVISASRFTLSIPNSTRLCSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSTFFKKLKL
        ASVSAIWLNKDDPHTSEYCSP+NIDSMHKVTLEVKGETQI+NLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVS FFKKLKL
Subjt:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSTFFKKLKL

XP_023546189.1 putative peptidyl-tRNA hydrolase PTRHD1 [Cucurbita pepo subsp. pepo]5.6e-8585.15Show/hide
Query:  MVSCATLCEDIMTSVISASRFTLSIPNSTRL--CSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLID
        MVSCATLCEDIM SVISAS FT SI  ST+L  CSR+RVW SSSLSLRS NRNSN FSSASMSES ESNS  P DDG    E+T DVL+QYVVLRRDLID
Subjt:  MVSCATLCEDIMTSVISASRFTLSIPNSTRL--CSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLID

Query:  SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSTFFKKLKL
        SWPLGSVVTQGCHASVSA+WLNKDDPHTSEYCSP NIDSMHKVTLEVKGETQI+NLSEKLKA+SI HKLWIEQPENIPTCLATKPYPKSVVS FFKKLKL
Subjt:  SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSTFFKKLKL

Query:  SK
         K
Subjt:  SK

TrEMBL top hitse value%identityAlignment
A0A6J1GHT5 Aminoacyl-tRNA hydrolase3.3e-8387.7Show/hide
Query:  MTSVISASRFTLSIPNSTRLCSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SVISASRFT SI NS RLC  ARVW  SS+ LRS N NS  FSSASMSES ESNS+LPLDDGGAKAEE  DVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVISASRFTLSIPNSTRLCSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSTFFKKLKL
        ASVSAIWLNKDDPHTSEYCSP+NIDSMHKVTLEVKGETQI+NLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVS FFKKLKL
Subjt:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSTFFKKLKL

A0A6J1GJ11 Aminoacyl-tRNA hydrolase1.5e-8387.3Show/hide
Query:  MTSVISASRFTLSIPNSTRLCSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SVISASRFT SI NS RLC  ARVW  SS+ LRS N NS  FSSASMSES ESNS+LPLDDGGAKAEE  DVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVISASRFTLSIPNSTRLCSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSTFFKKLKLSK
        ASVSAIWLNKDDPHTSEYCSP+NIDSMHKVTLEVKGETQI+NLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVS FFKKLKL K
Subjt:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSTFFKKLKLSK

A0A6J1HBR1 Aminoacyl-tRNA hydrolase9.3e-7883.25Show/hide
Query:  MTSVISASRFTLSIPNSTRL--CSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQG
        M SVISASRFT SI  ST+L  CSR+RVW SSSLSLRS NRNSN FSS SMSES ESNS  P DD     E+T DVL+QYVVLRRDLIDSWPLGSVVTQG
Subjt:  MTSVISASRFTLSIPNSTRL--CSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQG

Query:  CHASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSTFFKKLKLSK
        CHASVSA+WLNKDDPHT EYCSP NIDSMHKVTLEVKGETQI+NLSEKL+ANSI HKLWIEQPENIPTCLATKPYPKSVVS FFKKLKL K
Subjt:  CHASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSTFFKKLKLSK

A0A6J1KJQ6 Aminoacyl-tRNA hydrolase6.6e-8487.3Show/hide
Query:  MTSVISASRFTLSIPNSTRLCSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SVISASRFT SI NS RLCS ARVW  SS+ L S N NS  FSSASMSES ESNS+LPLDDGGAKAEE  DVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVISASRFTLSIPNSTRLCSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSTFFKKLKLSK
        ASVSAIWLNKDDPHTSEYCSP+NIDSMHKVTLEVKGETQI+NLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVS FFKKLKL K
Subjt:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSTFFKKLKLSK

A0A6J1KTS0 Aminoacyl-tRNA hydrolase1.5e-8387.7Show/hide
Query:  MTSVISASRFTLSIPNSTRLCSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SVISASRFT SI NS RLCS ARVW  SS+ L S N NS  FSSASMSES ESNS+LPLDDGGAKAEE  DVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVISASRFTLSIPNSTRLCSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSTFFKKLKL
        ASVSAIWLNKDDPHTSEYCSP+NIDSMHKVTLEVKGETQI+NLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVS FFKKLKL
Subjt:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSTFFKKLKL

SwissProt top hitse value%identityAlignment
D3Z4S3 Putative peptidyl-tRNA hydrolase PTRHD17.9e-2648.74Show/hide
Query:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLAT
        +LVQY+VLR+DL     SWP G++V Q CHA+ +A+ L++D PHT+ Y     +  M KV LE   ET +  L+E L+  +I H LW+EQPENI TC+A 
Subjt:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLAT

Query:  KPYPKSVVSTFFKKLKLSK
        +PYPK  VS + KK +L K
Subjt:  KPYPKSVVSTFFKKLKLSK

Q3SZ85 Putative peptidyl-tRNA hydrolase PTRHD18.5e-2851.26Show/hide
Query:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLAT
        +LVQY+VLR+DL     SWP G+VV Q CHA+ +A+ L++D PHT+ Y     ++ M KV LE   ET +  L+E L+  +I HKLW+EQPENIPTC+A 
Subjt:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLAT

Query:  KPYPKSVVSTFFKKLKLSK
        +PYPK  VS + KK +L K
Subjt:  KPYPKSVVSTFFKKLKLSK

Q6GMV3 Putative peptidyl-tRNA hydrolase PTRHD13.9e-2547.9Show/hide
Query:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLAT
        VLVQY+VLR+DL     SWP G++V Q CHA+ +A+  ++D PHT+ Y   + +  M KV LE   ET +  L+E L+  +I H LW+EQPENI TC+A 
Subjt:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLAT

Query:  KPYPKSVVSTFFKKLKLSK
        +PYPK  V  + KK +L K
Subjt:  KPYPKSVVSTFFKKLKLSK

Arabidopsis top hitse value%identityAlignment
AT5G10700.1 Peptidyl-tRNA hydrolase II (PTH2) family protein9.2e-5471.92Show/hide
Query:  FSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINL
        F++AS S S ++  I  + D  + AE+  DV+VQYVVLRRDLIDSWPLGSVVTQGCHASV+AIW  KDDP T +YC P++IDSMHKVTLEVKGETQ++NL
Subjt:  FSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINL

Query:  SEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSTFFKKLKLSK
        SEKLK   I HKLW+EQPENIPTC+ATKPYPKS VS+FFKKLKL K
Subjt:  SEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSTFFKKLKLSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCATGTGCTACTTTGTGTGAAGATATCATGACATCTGTAATTTCAGCATCTCGATTCACACTCTCCATTCCCAATTCCACCAGGCTCTGTTCAAGGGCTAGGGT
TTGGTCATCTTCTTCACTCAGTCTTCGGTCTACGAATCGAAATTCCAATCCATTTAGCTCAGCTTCAATGAGTGAATCCACTGAAAGTAATTCCATTCTTCCATTGGACG
ACGGCGGAGCGAAGGCGGAGGAAACCGTCGATGTTTTGGTTCAATACGTGGTGCTCCGGAGAGATTTGATCGATTCGTGGCCGCTCGGAAGTGTCGTAACTCAGGGATGC
CATGCTTCAGTTTCCGCCATTTGGTTGAACAAAGACGATCCCCACACTTCAGAGTACTGTAGTCCCGAAAACATCGATTCTATGCACAAGGTTACTCTCGAGGTGAAGGG
AGAAACCCAGATCATTAACTTATCAGAAAAACTTAAAGCAAATTCAATCGTCCATAAACTCTGGATAGAACAACCAGAGAACATTCCAACATGTCTTGCCACAAAGCCCT
ACCCCAAATCTGTTGTATCAACATTTTTTAAAAAGCTGAAACTCTCTAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTCATGTGCTACTTTGTGTGAAGATATCATGACATCTGTAATTTCAGCATCTCGATTCACACTCTCCATTCCCAATTCCACCAGGCTCTGTTCAAGGGCTAGGGT
TTGGTCATCTTCTTCACTCAGTCTTCGGTCTACGAATCGAAATTCCAATCCATTTAGCTCAGCTTCAATGAGTGAATCCACTGAAAGTAATTCCATTCTTCCATTGGACG
ACGGCGGAGCGAAGGCGGAGGAAACCGTCGATGTTTTGGTTCAATACGTGGTGCTCCGGAGAGATTTGATCGATTCGTGGCCGCTCGGAAGTGTCGTAACTCAGGGATGC
CATGCTTCAGTTTCCGCCATTTGGTTGAACAAAGACGATCCCCACACTTCAGAGTACTGTAGTCCCGAAAACATCGATTCTATGCACAAGGTTACTCTCGAGGTGAAGGG
AGAAACCCAGATCATTAACTTATCAGAAAAACTTAAAGCAAATTCAATCGTCCATAAACTCTGGATAGAACAACCAGAGAACATTCCAACATGTCTTGCCACAAAGCCCT
ACCCCAAATCTGTTGTATCAACATTTTTTAAAAAGCTGAAACTCTCTAAGTGA
Protein sequenceShow/hide protein sequence
MVSCATLCEDIMTSVISASRFTLSIPNSTRLCSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGC
HASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSTFFKKLKLSK