; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg028933 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028933
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTMV resistance protein N
Genome locationscaffold5:14110108..14111218
RNA-Seq ExpressionSpg028933
SyntenySpg028933
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047980.1 TMV resistance protein N-like [Cucumis melo var. makuwa]6.3e-0936.84Show/hide
Query:  SRELLVVMKGEIPNYLNNQTTKSSISFSIEHNNNPNKEQAFVICVVFEVDEDSFAAKASIVYEVDVDGELKISFSKVFGGSKSEYMWLIITPLRFHSWDV
        SRE L +M  +IP + + +T  + +S S  H   P+ E+     V F+V+ DS+A  A I   + +  +L  SFS+ F  SKSEYMWLI T L + S +V
Subjt:  SRELLVVMKGEIPNYLNNQTTKSSISFSIEHNNNPNKEQAFVICVVFEVDEDSFAAKASIVYEVDVDGELKISFSKVFGGSKSEYMWLIITPLRFHSWDV

Query:  NDRLNIKAGFKVSGVNDNGIVRIRSHGVCVVEE
        ND   +   F+V   +      I   GV V EE
Subjt:  NDRLNIKAGFKVSGVNDNGIVRIRSHGVCVVEE

KGN65609.2 hypothetical protein Csa_019785 [Cucumis sativus]1.0e-1445.04Show/hide
Query:  LVVMKGEIPNYLNNQTTKSSISFSIEHNNNPNKEQAFVICVVFEVDEDSFAAKASIVYEVDVDGE-LKISFSKVFGGSKSEYMWLIIT-PLRFHSWDVND
        L+V   EIP + NNQTT+SSISFS +HN++     A V+CVVF+VD DSF A+A I ++V  DG+ L +   + + GSKSE+M L+ T P +    + N+
Subjt:  LVVMKGEIPNYLNNQTTKSSISFSIEHNNNPNKEQAFVICVVFEVDEDSFAAKASIVYEVDVDGE-LKISFSKVFGGSKSEYMWLIIT-PLRFHSWDVND

Query:  RLNIKAGFKVSGVNDNGIVRIRSHGVCVVEE
        R  I+  F+V   N    V IRS GV VV++
Subjt:  RLNIKAGFKVSGVNDNGIVRIRSHGVCVVEE

TYK06440.1 TMV resistance protein N [Cucumis melo var. makuwa]4.6e-1239.86Show/hide
Query:  SDNLEWDGSRELLVVMKGEIPNYLNNQTTKSSISFSIEHNNNPNKEQAFVICVVFEVDEDSFAAKASIVYEVDVDGE-LKISFSKVFGGSKSEYMWLIIT
        + +LE    +  L+V   +IP + NNQTT+SS SFS + N++     A V+CVVF+VDEDS  A+  I ++V +DG+ L +   + + GSKSE+M L+ T
Subjt:  SDNLEWDGSRELLVVMKGEIPNYLNNQTTKSSISFSIEHNNNPNKEQAFVICVVFEVDEDSFAAKASIVYEVDVDGE-LKISFSKVFGGSKSEYMWLIIT

Query:  -PLRFHSWDVNDRLNIKAGFKVSGVNDNGIVRIRSHGVCVVEE
         P +    + N+R  I+  F+V        V IRS GV VV E
Subjt:  -PLRFHSWDVNDRLNIKAGFKVSGVNDNGIVRIRSHGVCVVEE

XP_031741270.1 TMV resistance protein N-like [Cucumis sativus]1.5e-1545.99Show/hide
Query:  DNLEWDGSRELLVVMKGEIPNYLNNQ-TTKSSISFSIEHNNNPNKEQAFVICVVFEVDEDSFAAKASIVYEVDVDGE-LKISFSKVFGGSKSEYMWLIIT
        D L   GSRE  ++M G IP + N+Q TT SSIS S++H   P K Q    CV+F+VD DS  AKASI Y++ +DGE LK     V   SKSEYMWLI T
Subjt:  DNLEWDGSRELLVVMKGEIPNYLNNQ-TTKSSISFSIEHNNNPNKEQAFVICVVFEVDEDSFAAKASIVYEVDVDGE-LKISFSKVFGGSKSEYMWLIIT

Query:  PLRFHSWDVNDRLNIKAGFKVSGVNDNGIVRIRSHGV
        PL F S      ++ +    ++   DN    IRS GV
Subjt:  PLRFHSWDVNDRLNIKAGFKVSGVNDNGIVRIRSHGV

XP_038877835.1 LOW QUALITY PROTEIN: TMV resistance protein N-like [Benincasa hispida]4.8e-0936.84Show/hide
Query:  SRELLVVMKGEIPNYLNNQTTKSSISFSIEHNNNPNKEQAFVICVVFEVDEDSFAAKASIVYEVDVDGELKISFSKVFGGSKSEYMWLIITPLRFHSWDV
        SRE L+    EIP +   +TT + IS S  H   P+ E+    CV F+V+ DS    A +   + +   L  SF++ F  SKSEYMWL+ T L + S +V
Subjt:  SRELLVVMKGEIPNYLNNQTTKSSISFSIEHNNNPNKEQAFVICVVFEVDEDSFAAKASIVYEVDVDGELKISFSKVFGGSKSEYMWLIITPLRFHSWDV

Query:  NDRLNIKAGFKVSGVNDNGIVRIRSHGVCVVEE
         D   +   F+V   +    V IRS+G+ V EE
Subjt:  NDRLNIKAGFKVSGVNDNGIVRIRSHGVCVVEE

TrEMBL top hitse value%identityAlignment
A0A0A0KM44 Uncharacterized protein7.5e-1645.99Show/hide
Query:  DNLEWDGSRELLVVMKGEIPNYLNNQ-TTKSSISFSIEHNNNPNKEQAFVICVVFEVDEDSFAAKASIVYEVDVDGE-LKISFSKVFGGSKSEYMWLIIT
        D L   GSRE  ++M G IP + N+Q TT SSIS S++H   P K Q    CV+F+VD DS  AKASI Y++ +DGE LK     V   SKSEYMWLI T
Subjt:  DNLEWDGSRELLVVMKGEIPNYLNNQ-TTKSSISFSIEHNNNPNKEQAFVICVVFEVDEDSFAAKASIVYEVDVDGE-LKISFSKVFGGSKSEYMWLIIT

Query:  PLRFHSWDVNDRLNIKAGFKVSGVNDNGIVRIRSHGV
        PL F S      ++ +    ++   DN    IRS GV
Subjt:  PLRFHSWDVNDRLNIKAGFKVSGVNDNGIVRIRSHGV

A0A0A0LWV1 TIR domain-containing protein4.8e-1545.04Show/hide
Query:  LVVMKGEIPNYLNNQTTKSSISFSIEHNNNPNKEQAFVICVVFEVDEDSFAAKASIVYEVDVDGE-LKISFSKVFGGSKSEYMWLIIT-PLRFHSWDVND
        L+V   EIP + NNQTT+SSISFS +HN++     A V+CVVF+VD DSF A+A I ++V  DG+ L +   + + GSKSE+M L+ T P +    + N+
Subjt:  LVVMKGEIPNYLNNQTTKSSISFSIEHNNNPNKEQAFVICVVFEVDEDSFAAKASIVYEVDVDGE-LKISFSKVFGGSKSEYMWLIIT-PLRFHSWDVND

Query:  RLNIKAGFKVSGVNDNGIVRIRSHGVCVVEE
        R  I+  F+V   N    V IRS GV VV++
Subjt:  RLNIKAGFKVSGVNDNGIVRIRSHGVCVVEE

A0A5A7TXQ4 TMV resistance protein N-like3.0e-0936.84Show/hide
Query:  SRELLVVMKGEIPNYLNNQTTKSSISFSIEHNNNPNKEQAFVICVVFEVDEDSFAAKASIVYEVDVDGELKISFSKVFGGSKSEYMWLIITPLRFHSWDV
        SRE L +M  +IP + + +T  + +S S  H   P+ E+     V F+V+ DS+A  A I   + +  +L  SFS+ F  SKSEYMWLI T L + S +V
Subjt:  SRELLVVMKGEIPNYLNNQTTKSSISFSIEHNNNPNKEQAFVICVVFEVDEDSFAAKASIVYEVDVDGELKISFSKVFGGSKSEYMWLIITPLRFHSWDV

Query:  NDRLNIKAGFKVSGVNDNGIVRIRSHGVCVVEE
        ND   +   F+V   +      I   GV V EE
Subjt:  NDRLNIKAGFKVSGVNDNGIVRIRSHGVCVVEE

A0A5D3C521 TMV resistance protein N2.3e-1239.86Show/hide
Query:  SDNLEWDGSRELLVVMKGEIPNYLNNQTTKSSISFSIEHNNNPNKEQAFVICVVFEVDEDSFAAKASIVYEVDVDGE-LKISFSKVFGGSKSEYMWLIIT
        + +LE    +  L+V   +IP + NNQTT+SS SFS + N++     A V+CVVF+VDEDS  A+  I ++V +DG+ L +   + + GSKSE+M L+ T
Subjt:  SDNLEWDGSRELLVVMKGEIPNYLNNQTTKSSISFSIEHNNNPNKEQAFVICVVFEVDEDSFAAKASIVYEVDVDGE-LKISFSKVFGGSKSEYMWLIIT

Query:  -PLRFHSWDVNDRLNIKAGFKVSGVNDNGIVRIRSHGVCVVEE
         P +    + N+R  I+  F+V        V IRS GV VV E
Subjt:  -PLRFHSWDVNDRLNIKAGFKVSGVNDNGIVRIRSHGVCVVEE

A0A5D3D427 TMV resistance protein N-like5.2e-0936.84Show/hide
Query:  SRELLVVMKGEIPNYLNNQTTKSSISFSIEHNNNPNKEQAFVICVVFEVDEDSFAAKASIVYEVDVDGELKISFSKVFGGSKSEYMWLIITPLRFHSWDV
        SRE L +M  EIP + + +T  + +S S  H   P+ E+     V F+V+ DS+A  A I   + +  +L  SFS+ F  SKSEYMWL+ T L + S +V
Subjt:  SRELLVVMKGEIPNYLNNQTTKSSISFSIEHNNNPNKEQAFVICVVFEVDEDSFAAKASIVYEVDVDGELKISFSKVFGGSKSEYMWLIITPLRFHSWDV

Query:  NDRLNIKAGFKVSGVNDNGIVRIRSHGVCVVEE
        ND   +   F+V   +      I   GV V EE
Subjt:  NDRLNIKAGFKVSGVNDNGIVRIRSHGVCVVEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTTCCAGTCGCCATCGGACAATCTTGAATGGGATGGCTCTAGAGAGTTATTAGTTGTAATGAAAGGTGAGATCCCAAATTACTTGAACAACCAAACGACGAAAAG
TTCAATAAGTTTTAGCATTGAACACAATAATAATCCAAATAAGGAACAAGCTTTCGTTATCTGTGTCGTTTTTGAAGTGGATGAAGATTCATTTGCAGCGAAGGCTTCGA
TTGTTTATGAAGTTGACGTGGACGGTGAATTGAAAATATCATTCTCAAAAGTCTTTGGCGGGTCAAAATCAGAATATATGTGGTTAATAATAACTCCTCTAAGATTTCAT
TCCTGGGATGTGAATGATCGACTTAACATCAAAGCCGGGTTTAAGGTTTCCGGAGTTAACGATAATGGTATTGTAAGGATAAGAAGCCATGGCGTGTGTGTTGTGGAAGA
GCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCTTCCAGTCGCCATCGGACAATCTTGAATGGGATGGCTCTAGAGAGTTATTAGTTGTAATGAAAGGTGAGATCCCAAATTACTTGAACAACCAAACGACGAAAAG
TTCAATAAGTTTTAGCATTGAACACAATAATAATCCAAATAAGGAACAAGCTTTCGTTATCTGTGTCGTTTTTGAAGTGGATGAAGATTCATTTGCAGCGAAGGCTTCGA
TTGTTTATGAAGTTGACGTGGACGGTGAATTGAAAATATCATTCTCAAAAGTCTTTGGCGGGTCAAAATCAGAATATATGTGGTTAATAATAACTCCTCTAAGATTTCAT
TCCTGGGATGTGAATGATCGACTTAACATCAAAGCCGGGTTTAAGGTTTCCGGAGTTAACGATAATGGTATTGTAAGGATAAGAAGCCATGGCGTGTGTGTTGTGGAAGA
GCATTAG
Protein sequenceShow/hide protein sequence
MSFQSPSDNLEWDGSRELLVVMKGEIPNYLNNQTTKSSISFSIEHNNNPNKEQAFVICVVFEVDEDSFAAKASIVYEVDVDGELKISFSKVFGGSKSEYMWLIITPLRFH
SWDVNDRLNIKAGFKVSGVNDNGIVRIRSHGVCVVEEH