; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg028944 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028944
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionribosomal RNA small subunit methyltransferase NEP1
Genome locationscaffold5:14423993..14429271
RNA-Seq ExpressionSpg028944
SyntenySpg028944
Gene Ontology termsGO:0070475 - rRNA base methylation (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0032040 - small-subunit processome (cellular component)
GO:0019843 - rRNA binding (molecular function)
GO:0070037 - rRNA (pseudouridine) methyltransferase activity (molecular function)
InterPro domainsIPR005304 - Ribosomal biogenesis, methyltransferase, EMG1/NEP1
IPR029026 - tRNA (guanine-N1-)-methyltransferase, N-terminal
IPR029028 - Alpha/beta knot methyltransferases


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017643.1 Ribosomal RNA small subunit methyltransferase NEP1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-13891.43Show/hide
Query:  MVRPFAAKGKKRKKTEKYDRDDDDGESTAPAKKPMVVKEPDEEEPVNEAAKEDFHELEGIPIVPRDPKSDNNAGVIFILERASLEVAKVGKNYQLLNSDD
        MVRPFAAKGKKRKKTE+YDRDDD  ESTA AKK MV  EPD E+P NEAA+E+FHELEGIPIVP+DPKSD+ AGVIF+LERASLEVAKVGKNYQLLNSDD
Subjt:  MVRPFAAKGKKRKKTEKYDRDDDDGESTAPAKKPMVVKEPDEEEPVNEAAKEDFHELEGIPIVPRDPKSDNNAGVIFILERASLEVAKVGKNYQLLNSDD

Query:  HSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSISAAGKREKLFRVIKNPVTQYL
        HSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSI+AAGKREKLFRVIKNPVTQYL
Subjt:  HSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSISAAGKREKLFRVIKNPVTQYL

Query:  PANSCKMGFSHSSDKLVRVRNYLDTVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLADKWNVG
        P+NS KMGFSHSSDKLV+VR YLD V+DDVDLVFVVGAMAHGKIET YTDDLLAISEYPLSASCCIADICKDLADKWNVG
Subjt:  PANSCKMGFSHSSDKLVRVRNYLDTVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLADKWNVG

XP_008443268.1 PREDICTED: ribosomal RNA small subunit methyltransferase NEP1 [Cucumis melo]6.0e-13891.07Show/hide
Query:  MVRPFAAKGKKRKKTEKYDRDDDDGESTAPAKKPMVVKEPDEEEPVNEAAKEDFHELEGIPIVPRDPKSDNNAGVIFILERASLEVAKVGKNYQLLNSDD
        MVRPFAAKGKKRKK EKYDRD+D  ES++PAKK MV  EPDEE P     KEDFHELEGIPIVP+DPK+DNNAGVIFILERASLEVAKVGKNYQLLNSDD
Subjt:  MVRPFAAKGKKRKKTEKYDRDDDDGESTAPAKKPMVVKEPDEEEPVNEAAKEDFHELEGIPIVPRDPKSDNNAGVIFILERASLEVAKVGKNYQLLNSDD

Query:  HSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSISAAGKREKLFRVIKNPVTQYL
        HSN+LRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSI+AAGKREKLFRVIKNPVTQYL
Subjt:  HSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSISAAGKREKLFRVIKNPVTQYL

Query:  PANSCKMGFSHSSDKLVRVRNYLDTVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLADKWNVG
        PAN  KMGFSHSSDKLV++RNYLD VKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLA+KWNVG
Subjt:  PANSCKMGFSHSSDKLVRVRNYLDTVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLADKWNVG

XP_022935622.1 ribosomal RNA small subunit methyltransferase nep-1 [Cucurbita moschata]1.0e-13791.07Show/hide
Query:  MVRPFAAKGKKRKKTEKYDRDDDDGESTAPAKKPMVVKEPDEEEPVNEAAKEDFHELEGIPIVPRDPKSDNNAGVIFILERASLEVAKVGKNYQLLNSDD
        MVRPFAAKGKKRKK E+YDRDDD  ESTA AKK MV  EPD E+P NEAA+E+FHELEGIPIVP+DPKSD+ AGVIF+LERASLEVAKVGKNYQLLNSDD
Subjt:  MVRPFAAKGKKRKKTEKYDRDDDDGESTAPAKKPMVVKEPDEEEPVNEAAKEDFHELEGIPIVPRDPKSDNNAGVIFILERASLEVAKVGKNYQLLNSDD

Query:  HSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSISAAGKREKLFRVIKNPVTQYL
        HSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSI+AAGKREKLFRVIKNPVTQYL
Subjt:  HSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSISAAGKREKLFRVIKNPVTQYL

Query:  PANSCKMGFSHSSDKLVRVRNYLDTVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLADKWNVG
        P+NS KMGFSHSSDKLV+VR YLD V+DDVDLVFVVGAMAHGKIET YTDDLLAISEYPLSASCCIADICKDLADKWNVG
Subjt:  PANSCKMGFSHSSDKLVRVRNYLDTVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLADKWNVG

XP_023527836.1 ribosomal RNA small subunit methyltransferase nep-1 [Cucurbita pepo subsp. pepo]4.6e-13891.43Show/hide
Query:  MVRPFAAKGKKRKKTEKYDRDDDDGESTAPAKKPMVVKEPDEEEPVNEAAKEDFHELEGIPIVPRDPKSDNNAGVIFILERASLEVAKVGKNYQLLNSDD
        MVRPFAAKGKKRKKTE+YDRDDD  ESTA AKK MV  EPD E+P NEAA+E FHELEGIPIVP+DPKSD+ AGVIF+LERASLEVAKVGKNYQLLNSDD
Subjt:  MVRPFAAKGKKRKKTEKYDRDDDDGESTAPAKKPMVVKEPDEEEPVNEAAKEDFHELEGIPIVPRDPKSDNNAGVIFILERASLEVAKVGKNYQLLNSDD

Query:  HSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSISAAGKREKLFRVIKNPVTQYL
        HSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSI+AAGKREKLFRVIKNPVTQYL
Subjt:  HSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSISAAGKREKLFRVIKNPVTQYL

Query:  PANSCKMGFSHSSDKLVRVRNYLDTVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLADKWNVG
        P+NS KMGFSHSSDKLV+VR YLD V+DDVDLVFVVGAMAHGKIET YTDDLLAISEYPLSASCCIADICKDLADKWNVG
Subjt:  PANSCKMGFSHSSDKLVRVRNYLDTVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLADKWNVG

XP_038905075.1 ribosomal RNA small subunit methyltransferase nep-1 [Benincasa hispida]2.7e-13890Show/hide
Query:  MVRPFAAKGKKRKKTEKYDRDDDDGESTAPAKKPMVVKEPDEEEPVNEAAKEDFHELEGIPIVPRDPKSDNNAGVIFILERASLEVAKVGKNYQLLNSDD
        MVRPFAAKGKKRKK+EKYDRDDDDGEST PAKKP    EPDEE P     KEDFHELEGIPIVP+DP SD +AGVIF+LERASLEVAKVGKNYQLLNSDD
Subjt:  MVRPFAAKGKKRKKTEKYDRDDDDGESTAPAKKPMVVKEPDEEEPVNEAAKEDFHELEGIPIVPRDPKSDNNAGVIFILERASLEVAKVGKNYQLLNSDD

Query:  HSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSISAAGKREKLFRVIKNPVTQYL
        HSNFLR+NNRNPGDYRPDILHQALLAIFDSRIAKAGRLK VYVKTEKGLLIE+KPYVRLPRTQKRFYGVMLQLLQKLSI+AAGKREKLFRVIKNPVTQYL
Subjt:  HSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSISAAGKREKLFRVIKNPVTQYL

Query:  PANSCKMGFSHSSDKLVRVRNYLDTVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLADKWNVG
        PANS KMGFSHSSDKLV++RNYLD V+DDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLA+KWN+G
Subjt:  PANSCKMGFSHSSDKLVRVRNYLDTVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLADKWNVG

TrEMBL top hitse value%identityAlignment
A0A0A0LFI3 Uncharacterized protein8.4e-13890.39Show/hide
Query:  TMVRPFAAKGKKRKKTEKYDRDDDDGESTAPAKKPMVVKEPDEEEPVNEAAKEDFHELEGIPIVPRDPKSDNNAGVIFILERASLEVAKVGKNYQLLNSD
        TMVRPFAAKGKKRKK+EKYDRD+D  EST+P+KK M+  EPDE     E AKEDFHELEGIPI P+DPK+D+NAGVIFILERASLEVAKVGKNYQLLNSD
Subjt:  TMVRPFAAKGKKRKKTEKYDRDDDDGESTAPAKKPMVVKEPDEEEPVNEAAKEDFHELEGIPIVPRDPKSDNNAGVIFILERASLEVAKVGKNYQLLNSD

Query:  DHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSISAAGKREKLFRVIKNPVTQY
        DHSN+LRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSI+AAGKREKLFRVIKNPVTQY
Subjt:  DHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSISAAGKREKLFRVIKNPVTQY

Query:  LPANSCKMGFSHSSDKLVRVRNYLDTVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLADKWNVG
        LPAN  KMGFSHSSDKLV+VRNYLD VKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLA+KWNVG
Subjt:  LPANSCKMGFSHSSDKLVRVRNYLDTVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLADKWNVG

A0A1S3B7L0 ribosomal RNA small subunit methyltransferase NEP12.9e-13891.07Show/hide
Query:  MVRPFAAKGKKRKKTEKYDRDDDDGESTAPAKKPMVVKEPDEEEPVNEAAKEDFHELEGIPIVPRDPKSDNNAGVIFILERASLEVAKVGKNYQLLNSDD
        MVRPFAAKGKKRKK EKYDRD+D  ES++PAKK MV  EPDEE P     KEDFHELEGIPIVP+DPK+DNNAGVIFILERASLEVAKVGKNYQLLNSDD
Subjt:  MVRPFAAKGKKRKKTEKYDRDDDDGESTAPAKKPMVVKEPDEEEPVNEAAKEDFHELEGIPIVPRDPKSDNNAGVIFILERASLEVAKVGKNYQLLNSDD

Query:  HSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSISAAGKREKLFRVIKNPVTQYL
        HSN+LRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSI+AAGKREKLFRVIKNPVTQYL
Subjt:  HSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSISAAGKREKLFRVIKNPVTQYL

Query:  PANSCKMGFSHSSDKLVRVRNYLDTVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLADKWNVG
        PAN  KMGFSHSSDKLV++RNYLD VKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLA+KWNVG
Subjt:  PANSCKMGFSHSSDKLVRVRNYLDTVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLADKWNVG

A0A5D3DPQ6 Ribosomal RNA small subunit methyltransferase NEP12.9e-13891.07Show/hide
Query:  MVRPFAAKGKKRKKTEKYDRDDDDGESTAPAKKPMVVKEPDEEEPVNEAAKEDFHELEGIPIVPRDPKSDNNAGVIFILERASLEVAKVGKNYQLLNSDD
        MVRPFAAKGKKRKK EKYDRD+D  ES++PAKK MV  EPDEE P     KEDFHELEGIPIVP+DPK+DNNAGVIFILERASLEVAKVGKNYQLLNSDD
Subjt:  MVRPFAAKGKKRKKTEKYDRDDDDGESTAPAKKPMVVKEPDEEEPVNEAAKEDFHELEGIPIVPRDPKSDNNAGVIFILERASLEVAKVGKNYQLLNSDD

Query:  HSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSISAAGKREKLFRVIKNPVTQYL
        HSN+LRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSI+AAGKREKLFRVIKNPVTQYL
Subjt:  HSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSISAAGKREKLFRVIKNPVTQYL

Query:  PANSCKMGFSHSSDKLVRVRNYLDTVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLADKWNVG
        PAN  KMGFSHSSDKLV++RNYLD VKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLA+KWNVG
Subjt:  PANSCKMGFSHSSDKLVRVRNYLDTVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLADKWNVG

A0A6J1F634 ribosomal RNA small subunit methyltransferase nep-15.0e-13891.07Show/hide
Query:  MVRPFAAKGKKRKKTEKYDRDDDDGESTAPAKKPMVVKEPDEEEPVNEAAKEDFHELEGIPIVPRDPKSDNNAGVIFILERASLEVAKVGKNYQLLNSDD
        MVRPFAAKGKKRKK E+YDRDDD  ESTA AKK MV  EPD E+P NEAA+E+FHELEGIPIVP+DPKSD+ AGVIF+LERASLEVAKVGKNYQLLNSDD
Subjt:  MVRPFAAKGKKRKKTEKYDRDDDDGESTAPAKKPMVVKEPDEEEPVNEAAKEDFHELEGIPIVPRDPKSDNNAGVIFILERASLEVAKVGKNYQLLNSDD

Query:  HSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSISAAGKREKLFRVIKNPVTQYL
        HSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSI+AAGKREKLFRVIKNPVTQYL
Subjt:  HSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSISAAGKREKLFRVIKNPVTQYL

Query:  PANSCKMGFSHSSDKLVRVRNYLDTVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLADKWNVG
        P+NS KMGFSHSSDKLV+VR YLD V+DDVDLVFVVGAMAHGKIET YTDDLLAISEYPLSASCCIADICKDLADKWNVG
Subjt:  PANSCKMGFSHSSDKLVRVRNYLDTVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLADKWNVG

A0A6J1J0G6 ribosomal RNA small subunit methyltransferase nep-16.5e-13891.07Show/hide
Query:  MVRPFAAKGKKRKKTEKYDRDDDDGESTAPAKKPMVVKEPDEEEPVNEAAKEDFHELEGIPIVPRDPKSDNNAGVIFILERASLEVAKVGKNYQLLNSDD
        MVRPFAAKGKKRKKTE+YDRDDD  ES A AKK MV  EPD E+P NEAA+E+FHELEGIPIVP+DPKSD+ AGVIF+LERASLEVAKVGKNYQLLNSDD
Subjt:  MVRPFAAKGKKRKKTEKYDRDDDDGESTAPAKKPMVVKEPDEEEPVNEAAKEDFHELEGIPIVPRDPKSDNNAGVIFILERASLEVAKVGKNYQLLNSDD

Query:  HSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSISAAGKREKLFRVIKNPVTQYL
        HSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSI+AAGKREKLFRVIKNPVTQYL
Subjt:  HSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSISAAGKREKLFRVIKNPVTQYL

Query:  PANSCKMGFSHSSDKLVRVRNYLDTVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLADKWNVG
        P+NS KMGFSHSSDKLV+VR YLD V+DDVDLVFVVGAMAHGKIET YTDDLLAISEYPLSASCCIADICKDLADKWNVG
Subjt:  PANSCKMGFSHSSDKLVRVRNYLDTVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLADKWNVG

SwissProt top hitse value%identityAlignment
O35130 Ribosomal RNA small subunit methyltransferase NEP12.5e-4646.83Show/hide
Query:  VIFILERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLL
        +I +LE ASLE  KVGK Y+LLN D H + L +N R+PG+ RPDI HQ+LL + DS + +AG L+ VY+ T+K +LIE+ P  R+PRT  RF G+M+QLL
Subjt:  VIFILERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLL

Query:  QKLSISAAGKREKLFRVIKNPVTQYLPANSCKMGFSHSSDKLVRVRNYLDTVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLA
         KLS+ AA   +KL +VIKNPV+ + P    K+G S S + +  +R   + V     +VFVVGA AHGK+  +YT+ +++IS YPLSA+   A +     
Subjt:  QKLSISAAGKREKLFRVIKNPVTQYLPANSCKMGFSHSSDKLVRVRNYLDTVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLA

Query:  DKWNV
        + W V
Subjt:  DKWNV

Q06287 Ribosomal RNA small subunit methyltransferase NEP13.1e-4441.04Show/hide
Query:  EEEPVNEAAKEDFHELEGIPIVPRDP-----KSDNNAGVIFILERASLEVAKVGKN------YQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDS
        E+  V +A K    +     +VP+ P     K      +I +L  ASLE  K+  N      Y LLN DDH   L++  R+  + RPDI HQ LL + DS
Subjt:  EEEPVNEAAKEDFHELEGIPIVPRDP-----KSDNNAGVIFILERASLEVAKVGKN------YQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDS

Query:  RIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSISAAGKREKLFRVIKNPVTQYLPANSCKMGFSHSSDKLVRVRNYLDTVKDDV
         I KAG+L+ VY++T +G+LIE+ P VR+PRT KRF G+M+QLL KLSI +    EKL +VIKNP+T +LP    K+  S  +  ++RV++Y++ + DD 
Subjt:  RIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSISAAGKREKLFRVIKNPVTQYLPANSCKMGFSHSSDKLVRVRNYLDTVKDDV

Query:  DLVFVVGAMAHGK--IETDYTDDLLAISEYPLSASCCIADICKDLADKWNV
         +   VGAMA GK     +Y D+ + +S YPLSAS   +  C    D WN+
Subjt:  DLVFVVGAMAHGK--IETDYTDDLLAISEYPLSASCCIADICKDLADKWNV

Q92979 Ribosomal RNA small subunit methyltransferase NEP17.3e-4643.03Show/hide
Query:  DEEEPVNEAAKEDFHELEGIPIVPRDPK--SDNNAG---VIFILERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKA
        D  +P   +  E   + + +P  P+ P+  + N  G   +I +LE ASLE  KVGK Y+LLN D H + L +N R+PG+ RPDI HQ+LL + DS + +A
Subjt:  DEEEPVNEAAKEDFHELEGIPIVPRDPK--SDNNAG---VIFILERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKA

Query:  GRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSISAAGKREKLFRVIKNPVTQYLPANSCKMGFSHSSDKLVRVRNYLDTVKDDVDLVFV
        G L+ VY+ T+K +LIE+ P  R+PRT  RF G+M+QLL KLS+ AA   +KL +VIKNPV+ + P    K+G S S   +  VR   + V     +VFV
Subjt:  GRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSISAAGKREKLFRVIKNPVTQYLPANSCKMGFSHSSDKLVRVRNYLDTVKDDVDLVFV

Query:  VGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLADKWNV
        VGA AHGK+  +YT+ +++IS YPLSA+   A +     + W V
Subjt:  VGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLADKWNV

Q9W4J5 Ribosomal RNA small subunit methyltransferase NEP12.4e-4444.76Show/hide
Query:  VIFILERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLL
        +I +LE A LE  KV   ++LLN DDH+  +R+N R+PG  RPDI HQ LL +FDS + +AG L+ V+V+TE  +LIEI P  R+PRT KRF G+M+QLL
Subjt:  VIFILERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLL

Query:  QKLSISAAGKREKLFRVIKNPVTQYLPANSCKMGFSHSSDKLVRVRNYL-----DTVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADI
         K  I A     +L  VIKNP+T ++P    K   S S   L   R+ +      +   D  +V V+GA AHG ++TDYT++L +IS YPLSA+   + I
Subjt:  QKLSISAAGKREKLFRVIKNPVTQYLPANSCKMGFSHSSDKLVRVRNYL-----DTVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADI

Query:  CKDLADKWNV
        C    + W V
Subjt:  CKDLADKWNV

Q9XX15 Ribosomal RNA small subunit methyltransferase nep-13.1e-4446.53Show/hide
Query:  ILERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKL
        +LE  SLE AKVG  Y +L+SD H+NFLR+  ++P DYRPDILHQ LL + DS + +AG+L+ V+ +T K +L+++ P  R+PRT  RF G+M+QLL KL
Subjt:  ILERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKL

Query:  SISAAGKREKLFRVIKNPVTQYLPANSCKMGFSHSSDKLVRVRNYLDTVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLADKW
        SI AA   +KL  V+KNPV+ +LP  S KM  S +  +L  + N L   + D  LV ++G +A GKI  DY D    IS YPLSA+   A +   L + W
Subjt:  SISAAGKREKLFRVIKNPVTQYLPANSCKMGFSHSSDKLVRVRNYLDTVKDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLADKW

Query:  NV
         +
Subjt:  NV

Arabidopsis top hitse value%identityAlignment
AT3G57000.1 nucleolar essential protein-related2.6e-8356.04Show/hide
Query:  MVRPFAAKGKKRK-KTEKYDRDDDD-------------GESTAPAKKPMVVK---EPDEEEPVNEAAKEDFHELEGIPIVPRDPKSDNNAGVIFILERAS
        MVRP+  K  KRK + E+YD+++D+              ES+  AKK    +   + DEEE   EA       + GIPIV   P  +  +G++F+LE+AS
Subjt:  MVRPFAAKGKKRK-KTEKYDRDDDD-------------GESTAPAKKPMVVK---EPDEEEPVNEAAKEDFHELEGIPIVPRDPKSDNNAGVIFILERAS

Query:  LEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSISAAG
        LEVAKVGK YQLLNSDDH+NFL++NNRNP DYRPDI HQALL I DS + KAGRLK VYV+TEKG+L E+KP+VR+PRT KRF G+MLQLLQKLSI+A  
Subjt:  LEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSISAAG

Query:  KREKLFRVIKNPVTQ-YLPANSCKMGFSHSSDKLVRVRNYLDTV-KDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLADKWNV
         REKL R +KNP+ + +LP NS ++GFSHSS+KLV ++ +L TV  DD D VFVVGAMAHGKI+ +Y D+ +++SEYPLSA+ CI+ IC+ LA  WN+
Subjt:  KREKLFRVIKNPVTQ-YLPANSCKMGFSHSSDKLVRVRNYLDTV-KDDVDLVFVVGAMAHGKIETDYTDDLLAISEYPLSASCCIADICKDLADKWNV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCTCATTGTCGCCGCCGCCTCTCTCCCGTTCACTGTTGCCGCAGCCGTCGTCTTTCTTCCGCTCGTGCCGCCGTAGCCTCCCTTGATTTTCTACTCCCTTGCTGTTACTG
TCAGCCCAATAAGAAAAATTTTGCAGCCCAGTCCATAAACCCAGCTGTGTGGTGGCTGCAGCGCGCTTTCAAGGCGAAAACCAGCAGCCACTCCAGCTACACATCACTTC
GAAGCTTGAGGCCGAACAATACAATGGTTCGACCATTTGCAGCGAAGGGGAAGAAGAGAAAGAAGACTGAGAAATACGACAGAGATGATGACGACGGAGAATCGACCGCA
CCGGCCAAGAAGCCTATGGTGGTTAAGGAACCTGATGAAGAAGAACCAGTGAATGAAGCAGCAAAAGAAGACTTTCACGAGCTTGAAGGTATTCCAATTGTTCCAAGAGA
CCCCAAAAGTGATAACAATGCTGGTGTCATCTTCATCCTCGAGAGAGCTTCTTTGGAGGTCGCCAAAGTTGGGAAGAATTACCAGCTGTTGAATTCCGATGACCACTCCA
ATTTTTTGCGGAGAAATAACAGAAATCCGGGGGATTACAGACCAGATATCCTGCATCAAGCTCTTTTGGCGATTTTCGATAGCCGCATTGCAAAGGCTGGGAGGTTGAAA
GTTGTTTATGTGAAAACTGAGAAAGGCTTATTAATTGAAATTAAACCATATGTTCGTCTTCCAAGGACGCAGAAACGGTTTTATGGAGTTATGTTACAATTGCTACAAAA
GTTAAGCATCTCAGCTGCAGGTAAGCGTGAGAAACTTTTTCGGGTGATAAAGAACCCTGTGACTCAGTATTTACCTGCCAATTCTTGTAAAATGGGCTTCTCGCATAGTT
CAGACAAGTTGGTCAGGGTGCGAAATTATTTGGATACTGTCAAAGATGATGTAGACCTTGTTTTTGTGGTGGGTGCAATGGCTCATGGGAAAATTGAGACTGATTATACT
GATGATCTTTTAGCAATTTCTGAATATCCTCTCAGTGCTAGTTGCTGTATTGCGGATATCTGCAAAGATTTGGCAGATAAATGGAATGTAGGGTGA
mRNA sequenceShow/hide mRNA sequence
GCTCATTGTCGCCGCCGCCTCTCTCCCGTTCACTGTTGCCGCAGCCGTCGTCTTTCTTCCGCTCGTGCCGCCGTAGCCTCCCTTGATTTTCTACTCCCTTGCTGTTACTG
TCAGCCCAATAAGAAAAATTTTGCAGCCCAGTCCATAAACCCAGCTGTGTGGTGGCTGCAGCGCGCTTTCAAGGCGAAAACCAGCAGCCACTCCAGCTACACATCACTTC
GAAGCTTGAGGCCGAACAATACAATGGTTCGACCATTTGCAGCGAAGGGGAAGAAGAGAAAGAAGACTGAGAAATACGACAGAGATGATGACGACGGAGAATCGACCGCA
CCGGCCAAGAAGCCTATGGTGGTTAAGGAACCTGATGAAGAAGAACCAGTGAATGAAGCAGCAAAAGAAGACTTTCACGAGCTTGAAGGTATTCCAATTGTTCCAAGAGA
CCCCAAAAGTGATAACAATGCTGGTGTCATCTTCATCCTCGAGAGAGCTTCTTTGGAGGTCGCCAAAGTTGGGAAGAATTACCAGCTGTTGAATTCCGATGACCACTCCA
ATTTTTTGCGGAGAAATAACAGAAATCCGGGGGATTACAGACCAGATATCCTGCATCAAGCTCTTTTGGCGATTTTCGATAGCCGCATTGCAAAGGCTGGGAGGTTGAAA
GTTGTTTATGTGAAAACTGAGAAAGGCTTATTAATTGAAATTAAACCATATGTTCGTCTTCCAAGGACGCAGAAACGGTTTTATGGAGTTATGTTACAATTGCTACAAAA
GTTAAGCATCTCAGCTGCAGGTAAGCGTGAGAAACTTTTTCGGGTGATAAAGAACCCTGTGACTCAGTATTTACCTGCCAATTCTTGTAAAATGGGCTTCTCGCATAGTT
CAGACAAGTTGGTCAGGGTGCGAAATTATTTGGATACTGTCAAAGATGATGTAGACCTTGTTTTTGTGGTGGGTGCAATGGCTCATGGGAAAATTGAGACTGATTATACT
GATGATCTTTTAGCAATTTCTGAATATCCTCTCAGTGCTAGTTGCTGTATTGCGGATATCTGCAAAGATTTGGCAGATAAATGGAATGTAGGGTGA
Protein sequenceShow/hide protein sequence
AHCRRRLSPVHCCRSRRLSSARAAVASLDFLLPCCYCQPNKKNFAAQSINPAVWWLQRAFKAKTSSHSSYTSLRSLRPNNTMVRPFAAKGKKRKKTEKYDRDDDDGESTA
PAKKPMVVKEPDEEEPVNEAAKEDFHELEGIPIVPRDPKSDNNAGVIFILERASLEVAKVGKNYQLLNSDDHSNFLRRNNRNPGDYRPDILHQALLAIFDSRIAKAGRLK
VVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSISAAGKREKLFRVIKNPVTQYLPANSCKMGFSHSSDKLVRVRNYLDTVKDDVDLVFVVGAMAHGKIETDYT
DDLLAISEYPLSASCCIADICKDLADKWNVG