; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg028948 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028948
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionNucleolar protein 58-like
Genome locationscaffold5:16306359..16310607
RNA-Seq ExpressionSpg028948
SyntenySpg028948
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY08849.1 Uncharacterized protein TCM_024087 [Theobroma cacao]9.5e-0942.7Show/hide
Query:  IEGAQWRLSKIEKQTFQSAYLKSEVNTWLEFVKLHLLSTTHDSTISRDRVLLVFTILRSLSIDVGKIISSEIHNCWRKK---LGLVSLI
        + GAQW+ S  E  +F+ + +K E+  WL FV   LLS+TH S +++DR +L++ I+   SIDVGK+IS  I +  R K   +G  SLI
Subjt:  IEGAQWRLSKIEKQTFQSAYLKSEVNTWLEFVKLHLLSTTHDSTISRDRVLLVFTILRSLSIDVGKIISSEIHNCWRKK---LGLVSLI

EOY13933.1 Uncharacterized protein TCM_032752 [Theobroma cacao]4.3e-0939.56Show/hide
Query:  NEQLNPAVREVGIEGAQWRLSKIEKQTFQSAYLKSEVNTWLEFVKLHLLSTTHDSTISRDRVLLVFTILRSLSIDVGKIISSEIHNCWRKK
        ++  N  +  + IEGAQW+ S  E  +F+ + +K E+  WL FV   LL +TH S +++DR +L++ I+   SIDVGK+IS  I    R K
Subjt:  NEQLNPAVREVGIEGAQWRLSKIEKQTFQSAYLKSEVNTWLEFVKLHLLSTTHDSTISRDRVLLVFTILRSLSIDVGKIISSEIHNCWRKK

PON41193.1 LOW QUALITY PROTEIN: hypothetical protein PanWU01x14_291710 [Parasponia andersonii]1.1e-0737.25Show/hide
Query:  QLNPAVREVGIEGAQWRLSKIEKQTFQSAYLKSEVNTWLEFVKLHLLSTTHDSTISRDRVLLVFTILRSLSIDVGKIISSEIHNCWRKKLGLVSLIRSRI
        +L   +  V +  A+W +S +   T   + L      W  F+K +LL TTH  T+S+DR LL+++IL   SI+VG+II  EI  C  KKLG +  +   I
Subjt:  QLNPAVREVGIEGAQWRLSKIEKQTFQSAYLKSEVNTWLEFVKLHLLSTTHDSTISRDRVLLVFTILRSLSIDVGKIISSEIHNCWRKKLGLVSLIRSRI

Query:  EL
        +L
Subjt:  EL

TYG37159.1 hypothetical protein ES288_D13G120000v1 [Gossypium darwinii]1.4e-0740.51Show/hide
Query:  GAQWRLSKIEKQTFQSAYLKSEVNTWLEFVKLHLLSTTHDSTISRDRVLLVFTILRSLSIDVGKIISSEIHNCWRKKLG
        G+QW + K    + +  YLK     W  FV+ + +   H STIS +++LL++TIL   SI++GKII  EIH+C + K G
Subjt:  GAQWRLSKIEKQTFQSAYLKSEVNTWLEFVKLHLLSTTHDSTISRDRVLLVFTILRSLSIDVGKIISSEIHNCWRKKLG

TYH88163.1 hypothetical protein ES332_D01G168900v1 [Gossypium tomentosum]7.3e-0944.94Show/hide
Query:  GAQWRLSKIEKQTFQSAYLKSEVNTWLEFVKLHLLSTTHDSTISRDRVLLVFTILRSLSIDVGKIISSEIHNCWRKKLGLV---SLIRS
        G+QW + K    + +  YLK   N W  FV+   +  +H  TIS +R+LL++ IL   SI+VGKII  EIHNC +KK G V   SLI S
Subjt:  GAQWRLSKIEKQTFQSAYLKSEVNTWLEFVKLHLLSTTHDSTISRDRVLLVFTILRSLSIDVGKIISSEIHNCWRKKLGLV---SLIRS

TrEMBL top hitse value%identityAlignment
A0A061F2U9 Uncharacterized protein4.6e-0942.7Show/hide
Query:  IEGAQWRLSKIEKQTFQSAYLKSEVNTWLEFVKLHLLSTTHDSTISRDRVLLVFTILRSLSIDVGKIISSEIHNCWRKK---LGLVSLI
        + GAQW+ S  E  +F+ + +K E+  WL FV   LLS+TH S +++DR +L++ I+   SIDVGK+IS  I +  R K   +G  SLI
Subjt:  IEGAQWRLSKIEKQTFQSAYLKSEVNTWLEFVKLHLLSTTHDSTISRDRVLLVFTILRSLSIDVGKIISSEIHNCWRKK---LGLVSLI

A0A061FAJ6 Uncharacterized protein2.1e-0939.56Show/hide
Query:  NEQLNPAVREVGIEGAQWRLSKIEKQTFQSAYLKSEVNTWLEFVKLHLLSTTHDSTISRDRVLLVFTILRSLSIDVGKIISSEIHNCWRKK
        ++  N  +  + IEGAQW+ S  E  +F+ + +K E+  WL FV   LL +TH S +++DR +L++ I+   SIDVGK+IS  I    R K
Subjt:  NEQLNPAVREVGIEGAQWRLSKIEKQTFQSAYLKSEVNTWLEFVKLHLLSTTHDSTISRDRVLLVFTILRSLSIDVGKIISSEIHNCWRKK

A0A2P5AGA5 Uncharacterized protein (Fragment)6.6e-0837.23Show/hide
Query:  SNEQLNPAVREVGIEGAQWRLSKIEKQTFQSAYLKSEVNTWLEFVKLHLLSTTHDSTISRDRVLLVFTILRSLSIDVGKIISSEIHNCWRKKLG
        +   L   +  V + GA+W +S     T   + L      W  F+K HLL TTH  T+S+DR+LL+ ++L   SI+VG++I SEI  C  +K G
Subjt:  SNEQLNPAVREVGIEGAQWRLSKIEKQTFQSAYLKSEVNTWLEFVKLHLLSTTHDSTISRDRVLLVFTILRSLSIDVGKIISSEIHNCWRKKLG

A0A2P5AXB5 Uncharacterized protein5.1e-0837.25Show/hide
Query:  QLNPAVREVGIEGAQWRLSKIEKQTFQSAYLKSEVNTWLEFVKLHLLSTTHDSTISRDRVLLVFTILRSLSIDVGKIISSEIHNCWRKKLGLVSLIRSRI
        +L   +  V +  A+W +S +   T   + L      W  F+K +LL TTH  T+S+DR LL+++IL   SI+VG+II  EI  C  KKLG +  +   I
Subjt:  QLNPAVREVGIEGAQWRLSKIEKQTFQSAYLKSEVNTWLEFVKLHLLSTTHDSTISRDRVLLVFTILRSLSIDVGKIISSEIHNCWRKKLGLVSLIRSRI

Query:  EL
        +L
Subjt:  EL

A0A5D2MA47 Uncharacterized protein3.5e-0944.94Show/hide
Query:  GAQWRLSKIEKQTFQSAYLKSEVNTWLEFVKLHLLSTTHDSTISRDRVLLVFTILRSLSIDVGKIISSEIHNCWRKKLGLV---SLIRS
        G+QW + K    + +  YLK   N W  FV+   +  +H  TIS +R+LL++ IL   SI+VGKII  EIHNC +KK G V   SLI S
Subjt:  GAQWRLSKIEKQTFQSAYLKSEVNTWLEFVKLHLLSTTHDSTISRDRVLLVFTILRSLSIDVGKIISSEIHNCWRKKLGLV---SLIRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTGGCGCCATCTAATGAGCAACTCAATCCGGCCGTGAGAGAGGTAGGTATAGAAGGGGCTCAATGGCGGCTTTCAAAAATAGAAAAGCAGACCTTCCAATCTGC
ATACCTCAAAAGTGAGGTGAATACGTGGCTCGAGTTTGTCAAGCTGCACCTACTTTCAACCACTCATGATTCCACAATTTCTCGAGATCGGGTTCTTTTGGTTTTCACAA
TTCTCAGATCCTTAAGTATTGACGTCGGAAAGATTATCTCCAGCGAGATACACAATTGCTGGAGGAAAAAGCTTGGACTGGTTAGCCTAATTAGATCAAGGATTGAGTTA
AAGGTGGTGATGATTTGTTCAATGCTGAAAGAACTGTTTTGCTGCGGCAATGCATGGTTATGCAGGATGCTCAGAGAAACAAATGCTGATCAGATTGAGAGAGCAAAGTC
TGTTGATCCAGCAAAGCTGCGAGCAAAATTGGCCACGCAGCCGATATGGATAGCTTCTCTTAGTTTCAAGGTTGATTTAAGAGTTGTGTGGCTTGTAATCACATTAGACC
TTTATCTAGGTCGTTACCTTAGTTTGAGCCTGAGTCAAGGAAGTGGACGTTCTGGCCCTCCAGACGTTCCTGATGTTGATTTACATCCTGAGGTGAATTCTTCTATTCCT
CCTCCAGAGCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTGGCGCCATCTAATGAGCAACTCAATCCGGCCGTGAGAGAGGTAGGTATAGAAGGGGCTCAATGGCGGCTTTCAAAAATAGAAAAGCAGACCTTCCAATCTGC
ATACCTCAAAAGTGAGGTGAATACGTGGCTCGAGTTTGTCAAGCTGCACCTACTTTCAACCACTCATGATTCCACAATTTCTCGAGATCGGGTTCTTTTGGTTTTCACAA
TTCTCAGATCCTTAAGTATTGACGTCGGAAAGATTATCTCCAGCGAGATACACAATTGCTGGAGGAAAAAGCTTGGACTGGTTAGCCTAATTAGATCAAGGATTGAGTTA
AAGGTGGTGATGATTTGTTCAATGCTGAAAGAACTGTTTTGCTGCGGCAATGCATGGTTATGCAGGATGCTCAGAGAAACAAATGCTGATCAGATTGAGAGAGCAAAGTC
TGTTGATCCAGCAAAGCTGCGAGCAAAATTGGCCACGCAGCCGATATGGATAGCTTCTCTTAGTTTCAAGGTTGATTTAAGAGTTGTGTGGCTTGTAATCACATTAGACC
TTTATCTAGGTCGTTACCTTAGTTTGAGCCTGAGTCAAGGAAGTGGACGTTCTGGCCCTCCAGACGTTCCTGATGTTGATTTACATCCTGAGGTGAATTCTTCTATTCCT
CCTCCAGAGCCTTAA
Protein sequenceShow/hide protein sequence
MAVAPSNEQLNPAVREVGIEGAQWRLSKIEKQTFQSAYLKSEVNTWLEFVKLHLLSTTHDSTISRDRVLLVFTILRSLSIDVGKIISSEIHNCWRKKLGLVSLIRSRIEL
KVVMICSMLKELFCCGNAWLCRMLRETNADQIERAKSVDPAKLRAKLATQPIWIASLSFKVDLRVVWLVITLDLYLGRYLSLSLSQGSGRSGPPDVPDVDLHPEVNSSIP
PPEP