; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg028951 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028951
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionSWIM-type domain-containing protein
Genome locationscaffold5:15054138..15056143
RNA-Seq ExpressionSpg028951
SyntenySpg028951
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR004332 - Transposase, MuDR, plant
IPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK00436.1 uncharacterized protein E5676_scaffold169G00400 [Cucumis melo var. makuwa]7.5e-2628.12Show/hide
Query:  MFLEGSSSAIVGYENLLSVDSSSSCSASNVDFQVITDVHFDG-----NIKENNVFGSKEVLSKCFYFMAVKKNFEFKTLRSNSKSLEFQCVQDGCQWFVR
        M LE SS    G +NL S+  SSS    + DFQ++TD+H        ++KE ++F SKE+LSK FY++A+K NFEFKT+RSNSKS+EF+C QD C W+VR
Subjt:  MFLEGSSSAIVGYENLLSVDSSSSCSASNVDFQVITDVHFDG-----NIKENNVFGSKEVLSKCFYFMAVKKNFEFKTLRSNSKSLEFQCVQDGCQWFVR

Query:  ASQYKESELWMLR---------------------------------------------------------------------------------------
        AS+YK  ELW LR                                                                                       
Subjt:  ASQYKESELWMLR---------------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------------------------------NCR
                                                                                                          CR
Subjt:  -------------------------------------------------------------------------------------------------NCR

Query:  VWDLDEIPCAHALAVLRGRNLNTYSFVSNYYFSRTWSSTYRDFVHPVGNHSKWSSIDGNVNALPPVVKRQAGRPRKQRMLSIGE
        VWDLDEIPCAHALAVLRG                         + PVGNH+ W SI    N LPP  KR+AGRPRKQR+LSIGE
Subjt:  VWDLDEIPCAHALAVLRGRNLNTYSFVSNYYFSRTWSSTYRDFVHPVGNHSKWSSIDGNVNALPPVVKRQAGRPRKQRMLSIGE

TYK22454.1 uncharacterized protein E5676_scaffold3009G00020 [Cucumis melo var. makuwa]4.4e-2628.12Show/hide
Query:  MFLEGSSSAIVGYENLLSVDSSSSCSASNVDFQVITDVH-----FDGNIKENNVFGSKEVLSKCFYFMAVKKNFEFKTLRSNSKSLEFQCVQDGCQWFVR
        M LE SS    G +NL S+  SSS    N DFQ++TD+H     F  ++KE ++F SK++LSK FY++A+K NFEFKT++SNSKS+EF+C QD C W+VR
Subjt:  MFLEGSSSAIVGYENLLSVDSSSSCSASNVDFQVITDVH-----FDGNIKENNVFGSKEVLSKCFYFMAVKKNFEFKTLRSNSKSLEFQCVQDGCQWFVR

Query:  ASQYKESELWMLR---------------------------------------------------------------------------------------
        AS+YK  ELW LR                                                                                       
Subjt:  ASQYKESELWMLR---------------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------------------------------NCR
                                                                                                          CR
Subjt:  -------------------------------------------------------------------------------------------------NCR

Query:  VWDLDEIPCAHALAVLRGRNLNTYSFVSNYYFSRTWSSTYRDFVHPVGNHSKWSSIDGNVNALPPVVKRQAGRPRKQRMLSIGE
        VWDLDEIPCAHALAVLRG                         + PVGNH+ W SI    N LPP  KR+AGRPRKQR+LSIGE
Subjt:  VWDLDEIPCAHALAVLRGRNLNTYSFVSNYYFSRTWSSTYRDFVHPVGNHSKWSSIDGNVNALPPVVKRQAGRPRKQRMLSIGE

XP_038880504.1 uncharacterized protein LOC120072166 [Benincasa hispida]7.5e-2646.36Show/hide
Query:  KENNVFGSKEVLSKCFYFMAVKKNFEFKTLRSNSKSLEFQCVQDGCQWFVRASQYKESELWMLRNCRVWDLDEIPCAHALAVLRGRNLNTYSFVSNYYFS
        K  +    K VL+    F   +++ + ++ + +  + E   V DG   F+    YK        +CRVWDL EIPCAHA AV+ G NL+ Y+FV +YYF 
Subjt:  KENNVFGSKEVLSKCFYFMAVKKNFEFKTLRSNSKSLEFQCVQDGCQWFVRASQYKESELWMLRNCRVWDLDEIPCAHALAVLRGRNLNTYSFVSNYYFS

Query:  RTWSSTYRDFVHPVGNHSKWSSIDGNVNALPPVVKRQAGRPRKQRMLSIGE
         T  STY+  V+P+GNHS W SID  VN LPP+VKR  GRPRKQR+LSIGE
Subjt:  RTWSSTYRDFVHPVGNHSKWSSIDGNVNALPPVVKRQAGRPRKQRMLSIGE

XP_038907134.1 uncharacterized protein LOC120092945 [Benincasa hispida]9.4e-2964.22Show/hide
Query:  MFLEGSSSAIVG-YENLLSVDSSSSCSASNVDFQVITDVHFDGNIKENNVFGSKEVLSKCFYFMAVKKNFEFKTLRSNSKSLEFQCVQDGCQWFVRASQY
        M LEGSSS +    EN LS+   S     + DFQVI D+H   ++KE +VF SKE+LSKCFY++AVKKNFEFKTLRSNS+S+EF+CVQDGCQW+VRAS+Y
Subjt:  MFLEGSSSAIVG-YENLLSVDSSSSCSASNVDFQVITDVHFDGNIKENNVFGSKEVLSKCFYFMAVKKNFEFKTLRSNSKSLEFQCVQDGCQWFVRASQY

Query:  KESELWMLR
        K S+LWMLR
Subjt:  KESELWMLR

XP_038907134.1 uncharacterized protein LOC120092945 [Benincasa hispida]5.2e-2766.67Show/hide
Query:  NCRVWDLDEIPCAHALAVLRGRNLNTYSFVSNYYFSRTWSSTYRDFVHPVGNHSKWSSIDGNVNALPPVVKRQAGRPRKQRMLSIGE
        +C  WDL+EIPCAHA AVL   NL++Y+FVS+YYFS T+SSTY+  +HP+GNHS WSS+D + N LPP+VKRQ GRPRKQR+LS+GE
Subjt:  NCRVWDLDEIPCAHALAVLRGRNLNTYSFVSNYYFSRTWSSTYRDFVHPVGNHSKWSSIDGNVNALPPVVKRQAGRPRKQRMLSIGE

XP_038907134.1 uncharacterized protein LOC120092945 [Benincasa hispida]4.0e-2728.65Show/hide
Query:  MFLEGSSSAIVGYENLLSVDSSSSCSASNVDFQVITDVHFDG-----NIKENNVFGSKEVLSKCFYFMAVKKNFEFKTLRSNSKSLEFQCVQDGCQWFVR
        M LE SS    G +NL S+ SSSS    + DFQ++TD+H        N+KE ++F SKE+LSK FY++A+K NFEFKT+RSNSKS+EF+C QD C W+VR
Subjt:  MFLEGSSSAIVGYENLLSVDSSSSCSASNVDFQVITDVHFDG-----NIKENNVFGSKEVLSKCFYFMAVKKNFEFKTLRSNSKSLEFQCVQDGCQWFVR

Query:  ASQYKESELWMLR---------------------------------------------------------------------------------------
        AS+YK  ELW LR                                                                                       
Subjt:  ASQYKESELWMLR---------------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------------------------------NCR
                                                                                                          CR
Subjt:  -------------------------------------------------------------------------------------------------NCR

Query:  VWDLDEIPCAHALAVLRGRNLNTYSFVSNYYFSRTWSSTYRDFVHPVGNHSKWSSIDGNVNALPPVVKRQAGRPRKQRMLSIGE
        VWDLDEIPCAHALAVLRG                         + PVGNH+ W SI    N LPP  KR+AGRPRKQR+LSIGE
Subjt:  VWDLDEIPCAHALAVLRGRNLNTYSFVSNYYFSRTWSSTYRDFVHPVGNHSKWSSIDGNVNALPPVVKRQAGRPRKQRMLSIGE

TrEMBL top hitse value%identityAlignment
A0A5A7UI69 SWIM-type domain-containing protein2.3e-2527.6Show/hide
Query:  MFLEGSSSAIVGYENLLSVDSSSSCSASNVDFQVITDVH-----FDGNIKENNVFGSKEVLSKCFYFMAVKKNFEFKTLRSNSKSLEFQCVQDGCQWFVR
        M LE SS    G +NL S+  SSS    N DFQ++TD+H     F  ++KE ++F SK++LSK FY++A+K NFEFKT++SNSKS+EF+C QD C W+VR
Subjt:  MFLEGSSSAIVGYENLLSVDSSSSCSASNVDFQVITDVH-----FDGNIKENNVFGSKEVLSKCFYFMAVKKNFEFKTLRSNSKSLEFQCVQDGCQWFVR

Query:  ASQYKESELWMLR---------------------------------------------------------------------------------------
        AS+YK  ELW LR                                                                                       
Subjt:  ASQYKESELWMLR---------------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------------------------------NCR
                                                                                                          CR
Subjt:  -------------------------------------------------------------------------------------------------NCR

Query:  VWDLDEIPCAHALAVLRGRNLNTYSFVSNYYFSRTWSSTYRDFVHPVGNHSKWSSIDGNVNALPPVVKRQAGRPRKQRMLSIGE
        VWDLDEIPCAHAL VLRG                         + PVGNH+ W SI    N LPP  KR+AGRPRKQR+LS+GE
Subjt:  VWDLDEIPCAHALAVLRGRNLNTYSFVSNYYFSRTWSSTYRDFVHPVGNHSKWSSIDGNVNALPPVVKRQAGRPRKQRMLSIGE

A0A5D3C8T8 SWIM-type domain-containing protein3.6e-2628.12Show/hide
Query:  MFLEGSSSAIVGYENLLSVDSSSSCSASNVDFQVITDVHFDG-----NIKENNVFGSKEVLSKCFYFMAVKKNFEFKTLRSNSKSLEFQCVQDGCQWFVR
        M LE SS    G +NL S+  SSS    + DFQ++TD+H        ++KE ++F SKE+LSK FY++A+K NFEFKT+RSNSKS+EF+C QD C W+VR
Subjt:  MFLEGSSSAIVGYENLLSVDSSSSCSASNVDFQVITDVHFDG-----NIKENNVFGSKEVLSKCFYFMAVKKNFEFKTLRSNSKSLEFQCVQDGCQWFVR

Query:  ASQYKESELWMLR---------------------------------------------------------------------------------------
        AS+YK  ELW LR                                                                                       
Subjt:  ASQYKESELWMLR---------------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------------------------------NCR
                                                                                                          CR
Subjt:  -------------------------------------------------------------------------------------------------NCR

Query:  VWDLDEIPCAHALAVLRGRNLNTYSFVSNYYFSRTWSSTYRDFVHPVGNHSKWSSIDGNVNALPPVVKRQAGRPRKQRMLSIGE
        VWDLDEIPCAHALAVLRG                         + PVGNH+ W SI    N LPP  KR+AGRPRKQR+LSIGE
Subjt:  VWDLDEIPCAHALAVLRGRNLNTYSFVSNYYFSRTWSSTYRDFVHPVGNHSKWSSIDGNVNALPPVVKRQAGRPRKQRMLSIGE

A0A5D3CTF9 MuDR family transposase8.0e-2628.39Show/hide
Query:  MFLEGSSSAIVGYENLLSVDSSSSCSASNVDFQVITDVHFDG-----NIKENNVFGSKEVLSKCFYFMAVKKNFEFKTLRSNSKSLEFQCVQDGCQWFVR
        M LE SS    G +NL S+  SSS    + DFQ++TDVH        + KE ++F SKE+LSK FY++A+K NFEFKT+RSNSKS+EF+C QD C W+VR
Subjt:  MFLEGSSSAIVGYENLLSVDSSSSCSASNVDFQVITDVHFDG-----NIKENNVFGSKEVLSKCFYFMAVKKNFEFKTLRSNSKSLEFQCVQDGCQWFVR

Query:  ASQYKESELWMLR---------------------------------------------------------------------------------------
        AS+YK  ELW LR                                                                                       
Subjt:  ASQYKESELWMLR---------------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------------------------------NCR
                                                                                                          CR
Subjt:  -------------------------------------------------------------------------------------------------NCR

Query:  VWDLDEIPCAHALAVLRGRNLNTYSFVSNYYFSRTWSSTYRDFVHPVGNHSKWSSIDGNVNALPPVVKRQAGRPRKQRMLSIGE
        VWDLDEIPCAHALAVLRG                         + PVGNH+ W SI    N LPP  KR+AGRPRKQR+LSIGE
Subjt:  VWDLDEIPCAHALAVLRGRNLNTYSFVSNYYFSRTWSSTYRDFVHPVGNHSKWSSIDGNVNALPPVVKRQAGRPRKQRMLSIGE

A0A5D3DFS5 SWIM-type domain-containing protein2.1e-2628.12Show/hide
Query:  MFLEGSSSAIVGYENLLSVDSSSSCSASNVDFQVITDVH-----FDGNIKENNVFGSKEVLSKCFYFMAVKKNFEFKTLRSNSKSLEFQCVQDGCQWFVR
        M LE SS    G +NL S+  SSS    N DFQ++TD+H     F  ++KE ++F SK++LSK FY++A+K NFEFKT++SNSKS+EF+C QD C W+VR
Subjt:  MFLEGSSSAIVGYENLLSVDSSSSCSASNVDFQVITDVH-----FDGNIKENNVFGSKEVLSKCFYFMAVKKNFEFKTLRSNSKSLEFQCVQDGCQWFVR

Query:  ASQYKESELWMLR---------------------------------------------------------------------------------------
        AS+YK  ELW LR                                                                                       
Subjt:  ASQYKESELWMLR---------------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------------------------------NCR
                                                                                                          CR
Subjt:  -------------------------------------------------------------------------------------------------NCR

Query:  VWDLDEIPCAHALAVLRGRNLNTYSFVSNYYFSRTWSSTYRDFVHPVGNHSKWSSIDGNVNALPPVVKRQAGRPRKQRMLSIGE
        VWDLDEIPCAHALAVLRG                         + PVGNH+ W SI    N LPP  KR+AGRPRKQR+LSIGE
Subjt:  VWDLDEIPCAHALAVLRGRNLNTYSFVSNYYFSRTWSSTYRDFVHPVGNHSKWSSIDGNVNALPPVVKRQAGRPRKQRMLSIGE

A0A5D3DX57 MuDR family transposase1.9e-2728.65Show/hide
Query:  MFLEGSSSAIVGYENLLSVDSSSSCSASNVDFQVITDVHFDG-----NIKENNVFGSKEVLSKCFYFMAVKKNFEFKTLRSNSKSLEFQCVQDGCQWFVR
        M LE SS    G +NL S+ SSSS    + DFQ++TD+H        N+KE ++F SKE+LSK FY++A+K NFEFKT+RSNSKS+EF+C QD C W+VR
Subjt:  MFLEGSSSAIVGYENLLSVDSSSSCSASNVDFQVITDVHFDG-----NIKENNVFGSKEVLSKCFYFMAVKKNFEFKTLRSNSKSLEFQCVQDGCQWFVR

Query:  ASQYKESELWMLR---------------------------------------------------------------------------------------
        AS+YK  ELW LR                                                                                       
Subjt:  ASQYKESELWMLR---------------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------------------------------NCR
                                                                                                          CR
Subjt:  -------------------------------------------------------------------------------------------------NCR

Query:  VWDLDEIPCAHALAVLRGRNLNTYSFVSNYYFSRTWSSTYRDFVHPVGNHSKWSSIDGNVNALPPVVKRQAGRPRKQRMLSIGE
        VWDLDEIPCAHALAVLRG                         + PVGNH+ W SI    N LPP  KR+AGRPRKQR+LSIGE
Subjt:  VWDLDEIPCAHALAVLRGRNLNTYSFVSNYYFSRTWSSTYRDFVHPVGNHSKWSSIDGNVNALPPVVKRQAGRPRKQRMLSIGE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTTGGAAGGGTCATCTAGTGCTATTGTTGGATATGAGAATTTGTTGTCTGTTGATTCTTCCTCATCTTGTTCTGCCAGTAATGTTGATTTTCAAGTTATTACTGA
TGTGCATTTTGATGGGAATATAAAGGAGAATAATGTTTTTGGAAGTAAGGAAGTTTTGTCAAAGTGTTTTTACTTTATGGCTGTCAAGAAAAATTTTGAATTTAAGACTT
TAAGATCAAATTCAAAATCACTTGAGTTTCAATGTGTTCAAGATGGTTGCCAATGGTTTGTTAGGGCATCTCAGTATAAAGAGAGTGAATTGTGGATGCTTAGGAATTGT
CGTGTTTGGGATCTTGATGAAATCCCATGTGCTCATGCACTTGCTGTTCTTCGTGGGCGGAATTTGAATACTTATTCTTTTGTCTCAAATTATTACTTTTCAAGAACATG
GTCATCAACTTATAGAGATTTTGTTCATCCCGTCGGTAATCATTCTAAATGGAGCTCTATAGATGGAAACGTGAATGCGTTGCCTCCAGTTGTTAAACGTCAGGCAGGAA
GACCAAGAAAACAGAGGATGCTATCAATTGGGGAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTTTGGAAGGGTCATCTAGTGCTATTGTTGGATATGAGAATTTGTTGTCTGTTGATTCTTCCTCATCTTGTTCTGCCAGTAATGTTGATTTTCAAGTTATTACTGA
TGTGCATTTTGATGGGAATATAAAGGAGAATAATGTTTTTGGAAGTAAGGAAGTTTTGTCAAAGTGTTTTTACTTTATGGCTGTCAAGAAAAATTTTGAATTTAAGACTT
TAAGATCAAATTCAAAATCACTTGAGTTTCAATGTGTTCAAGATGGTTGCCAATGGTTTGTTAGGGCATCTCAGTATAAAGAGAGTGAATTGTGGATGCTTAGGAATTGT
CGTGTTTGGGATCTTGATGAAATCCCATGTGCTCATGCACTTGCTGTTCTTCGTGGGCGGAATTTGAATACTTATTCTTTTGTCTCAAATTATTACTTTTCAAGAACATG
GTCATCAACTTATAGAGATTTTGTTCATCCCGTCGGTAATCATTCTAAATGGAGCTCTATAGATGGAAACGTGAATGCGTTGCCTCCAGTTGTTAAACGTCAGGCAGGAA
GACCAAGAAAACAGAGGATGCTATCAATTGGGGAA
Protein sequenceShow/hide protein sequence
MFLEGSSSAIVGYENLLSVDSSSSCSASNVDFQVITDVHFDGNIKENNVFGSKEVLSKCFYFMAVKKNFEFKTLRSNSKSLEFQCVQDGCQWFVRASQYKESELWMLRNC
RVWDLDEIPCAHALAVLRGRNLNTYSFVSNYYFSRTWSSTYRDFVHPVGNHSKWSSIDGNVNALPPVVKRQAGRPRKQRMLSIGE