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Spg028960 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028960
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold5:15932575..15934151
RNA-Seq ExpressionSpg028960
SyntenySpg028960
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055110.1 hypothetical protein E6C27_scaffold231G00360 [Cucumis melo var. makuwa]4.2e-0751.81Show/hide
Query:  MASKKQSSRIGEVLLLLLVFLLTTSVTAKRHLLAAPNGDIGVKGAKVDRQEAQDDPW---GHGGW---GGWGGGRGGYHPPSK
        MASKK  SRI  ++L LL+ L TT+VT+KRHLL +PN +    G +   QEA DDPW    HG W   GGWGGGR   H P +
Subjt:  MASKKQSSRIGEVLLLLLVFLLTTSVTAKRHLLAAPNGDIGVKGAKVDRQEAQDDPW---GHGGW---GGWGGGRGGYHPPSK
KGN50354.1 hypothetical protein Csa_000188 [Cucumis sativus]1.1e-0448.1Show/hide
Query:  MASKKQSSRIGEVLLLLLVFLLTTSVTAKRHLLAAPNGDIGVKGAKVDRQEAQDDPWGHGGWGG-WGGGRGGYHPPSKT
        MASKK  S I  ++  LL+ L TT+VT+KRHLL +PN    V G +   QEA ++PW  G +G  WGGG GG  P  +T
Subjt:  MASKKQSSRIGEVLLLLLVFLLTTSVTAKRHLLAAPNGDIGVKGAKVDRQEAQDDPWGHGGWGG-WGGGRGGYHPPSKT
TrEMBL top hitse value%identityAlignment
A0A0A0KN68 Uncharacterized protein5.5e-0548.1Show/hide
Query:  MASKKQSSRIGEVLLLLLVFLLTTSVTAKRHLLAAPNGDIGVKGAKVDRQEAQDDPWGHGGWGG-WGGGRGGYHPPSKT
        MASKK  S I  ++  LL+ L TT+VT+KRHLL +PN    V G +   QEA ++PW  G +G  WGGG GG  P  +T
Subjt:  MASKKQSSRIGEVLLLLLVFLLTTSVTAKRHLLAAPNGDIGVKGAKVDRQEAQDDPWGHGGWGG-WGGGRGGYHPPSKT
A0A5A7UIN4 Uncharacterized protein2.0e-0751.81Show/hide
Query:  MASKKQSSRIGEVLLLLLVFLLTTSVTAKRHLLAAPNGDIGVKGAKVDRQEAQDDPW---GHGGW---GGWGGGRGGYHPPSK
        MASKK  SRI  ++L LL+ L TT+VT+KRHLL +PN +    G +   QEA DDPW    HG W   GGWGGGR   H P +
Subjt:  MASKKQSSRIGEVLLLLLVFLLTTSVTAKRHLLAAPNGDIGVKGAKVDRQEAQDDPW---GHGGW---GGWGGGRGGYHPPSK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGCTTCCAAGAAGCAATCCTCAAGAATTGGAGAAGTTCTTTTGTTGCTTCTCGTGTTTCTCTTGACTACCAGCGTCACTGCAAAAAGGCACTTGCTTGCTGCCCC
AAACGGTGATATTGGGGTTAAGGGAGCAAAAGTTGATAGACAAGAAGCACAAGATGATCCATGGGGTCATGGAGGATGGGGAGGATGGGGAGGGGGACGGGGAGGGTACC
ATCCTCCATCTAAAACAAAA
mRNA sequenceShow/hide mRNA sequence
ATGATGGCTTCCAAGAAGCAATCCTCAAGAATTGGAGAAGTTCTTTTGTTGCTTCTCGTGTTTCTCTTGACTACCAGCGTCACTGCAAAAAGGCACTTGCTTGCTGCCCC
AAACGGTGATATTGGGGTTAAGGGAGCAAAAGTTGATAGACAAGAAGCACAAGATGATCCATGGGGTCATGGAGGATGGGGAGGATGGGGAGGGGGACGGGGAGGGTACC
ATCCTCCATCTAAAACAAAA
Protein sequenceShow/hide protein sequence
MMASKKQSSRIGEVLLLLLVFLLTTSVTAKRHLLAAPNGDIGVKGAKVDRQEAQDDPWGHGGWGGWGGGRGGYHPPSKTK