; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg028979 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028979
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionEnzymatic polyprotein
Genome locationscaffold5:15227965..15228947
RNA-Seq ExpressionSpg028979
SyntenySpg028979
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041674.1 movement protein [Cucumis melo var. makuwa]3.1e-4340.68Show/hide
Query:  MSGRSSVSEF--HPIREKPVTRSKSMRMSVDFDQPIPDIQYEKFEGSISPTQIDMERKSGYIYNHINVISSIEQRYDQMYDKYINCYLK-----QKDWVN
        MS R S S        +  + RS+S+R SVDF   IPD+ YEK +GS+ PTQ DME++S  +YN INVIS  ++R+ + Y  YI+ ++K     +K ++ 
Subjt:  MSGRSSVSEF--HPIREKPVTRSKSMRMSVDFDQPIPDIQYEKFEGSISPTQIDMERKSGYIYNHINVISSIEQRYDQMYDKYINCYLK-----QKDWVN

Query:  IPKF------HTRAEYIALVKQKAAQQSVSVVKKPYKWVTASGKEVLSDYPHEEEASFPHPQMSAISIVSSPYKTIDEEKTESFGVREIKNTQ-QINKKI
        +P F        R +  ALVK+  A   V+++K    WVTASGKE+ S+YP EEEA FPHP + AI +VSSPYKTI+E+K +  GVREIKN Q Q+N   
Subjt:  IPKF------HTRAEYIALVKQKAAQQSVSVVKKPYKWVTASGKEVLSDYPHEEEASFPHPQMSAISIVSSPYKTIDEEKTESFGVREIKNTQ-QINKKI

Query:  SKLMTDDEGGVGTSKKKEVANFGISKVNL--------------------DNLNTIQR----RATRPNILPVKTYNTDMKNHYRKPTPPDLGWDDL
            TD        + KE A+  ++++N                       +N I++    + +   ILPV  +  DMKNHY +P+PPDLGWDDL
Subjt:  SKLMTDDEGGVGTSKKKEVANFGISKVNL--------------------DNLNTIQR----RATRPNILPVKTYNTDMKNHYRKPTPPDLGWDDL

KAA0050195.1 polyprotein [Cucumis melo var. makuwa]2.4e-4844.96Show/hide
Query:  SGRSSVSEFHP-IREKPVTRSKSMRMSVDFDQPIPDIQYEKFEGSISPTQIDMERKSGYIYNHINVIS-SIEQRYDQMYDKYINCYLKQKDWVNIPKFHT
        SGRSS+SE+ P  RE+P+T+S SMRM VDF+Q IPD QYEK EGS+SPTQ  MER+SG IYN IN I+   +  YDQ Y+KYI+ Y+ QK+W N PKF +
Subjt:  SGRSSVSEFHP-IREKPVTRSKSMRMSVDFDQPIPDIQYEKFEGSISPTQIDMERKSGYIYNHINVIS-SIEQRYDQMYDKYINCYLKQKDWVNIPKFHT

Query:  RAEYIALVKQKAAQQSVSVVKKPYKWVTASGKEVLSDYPHEEEASFPHPQMSAISIVSSPYKTIDEEKTESFGVREIKNTQQINKKISKLMTDDEGGVGT
        + E+IA V QKA + SV V+ KP  W T +GKE+LS+YP EEEASFPHP+M + +IV S YKTIDEE+T++                             
Subjt:  RAEYIALVKQKAAQQSVSVVKKPYKWVTASGKEVLSDYPHEEEASFPHPQMSAISIVSSPYKTIDEEKTESFGVREIKNTQQINKKISKLMTDDEGGVGT

Query:  SKKKEVANFGISKVNLDNLNTIQRRATRPNILPVKTYNTDMKNHYRKPTPPDLGWDDL
                                                  NHY++P+PPDLGWDDL
Subjt:  SKKKEVANFGISKVNLDNLNTIQRRATRPNILPVKTYNTDMKNHYRKPTPPDLGWDDL

KAA0052109.1 Enzymatic polyprotein [Cucumis melo var. makuwa]2.7e-3937.42Show/hide
Query:  MSGRSSVSEF--HPIREKPVTRSKSMRMSVDFDQPIPDIQYEKFEGSISPTQIDMERKSGYIYNHINVISSIEQRYDQMYDKYINCYLK-----QKDWVN
        MS R S S           + RS+S+R SVDF   IPD+ YEK + S+SPTQ DMER+S  +YN INVIS  ++R+ + Y  YI+ ++K     +K ++ 
Subjt:  MSGRSSVSEF--HPIREKPVTRSKSMRMSVDFDQPIPDIQYEKFEGSISPTQIDMERKSGYIYNHINVISSIEQRYDQMYDKYINCYLK-----QKDWVN

Query:  IPKF------HTRAEYIALVKQKAAQQSVSVVKKPYKWVTASGKEVLSDYPHEEEASFPHPQMSAISIVSSPYKTIDEEKTESFGVREIKN-------TQ
        +P F        RA+  ALVK+  A   ++++K    WVT SGKEV S+YP EEEA FPHP + AI ++SSPYKTI+E+K +  GVREIKN       T 
Subjt:  IPKF------HTRAEYIALVKQKAAQQSVSVVKKPYKWVTASGKEVLSDYPHEEEASFPHPQMSAISIVSSPYKTIDEEKTESFGVREIKN-------TQ

Query:  QINKKISKLMTDDE-------------------------GGVGTSKKKEVANFGISKVNL--------------------DNLNTIQR----RATRPNIL
        +I   +SK +   E                               K KE A+  ++++N                       +N I++    +A+   IL
Subjt:  QINKKISKLMTDDE-------------------------GGVGTSKKKEVANFGISKVNL--------------------DNLNTIQR----RATRPNIL

Query:  PVKTYNTDMKNHYRKPTPPDLGWDDL
        PV  +  DMKNHY +P+PPDLGWDDL
Subjt:  PVKTYNTDMKNHYRKPTPPDLGWDDL

TYJ97599.1 Enzymatic polyprotein [Cucumis melo var. makuwa]2.7e-3938.96Show/hide
Query:  MSGRSSVSEF--HPIREKPVTRSKSMRMSVDFDQPIPDIQYEKFEGSISPTQIDMERKSGYIYNHINVISSIEQRYDQMYDKYINCYLK-----QKDWVN
        MS R S S         + + RS+S+R SVDF   IPD+ YEK +GS+SPTQ DMER+S  +YN INVIS+ ++R+ + Y  YI+ ++K     +K ++ 
Subjt:  MSGRSSVSEF--HPIREKPVTRSKSMRMSVDFDQPIPDIQYEKFEGSISPTQIDMERKSGYIYNHINVISSIEQRYDQMYDKYINCYLK-----QKDWVN

Query:  IPKF------HTRAEYIALVKQKAAQQSVSVVKKPYKWVTASGKEVLSDYPHEEEASFPHPQMSAISIVSSPYKTIDEEKTESFGVREIKNTQ-QIN---
        +P F        RA+  AL K+  A   V+++K    WVTASGKEV S+YP EEEA F HP + AI +VSSPYKTI+E+K +  GVREIKN Q Q+N   
Subjt:  IPKF------HTRAEYIALVKQKAAQQSVSVVKKPYKWVTASGKEVLSDYPHEEEASFPHPQMSAISIVSSPYKTIDEEKTESFGVREIKNTQ-QIN---

Query:  ---KKISKLMTDDEGGVGTSKKK--------------EVANFGI--------------------------SKVNLDN-----LNTIQR----RATRPNIL
             +SK +   E      K K              +  +F I                          SKV ++      +N I++    +A+   IL
Subjt:  ---KKISKLMTDDEGGVGTSKKK--------------EVANFGI--------------------------SKVNLDN-----LNTIQR----RATRPNIL

Query:  PVKTYNTDMKNHYRKPTPPDLGWDDL
        PV  +  DMKNHY +P+PPDLGWDDL
Subjt:  PVKTYNTDMKNHYRKPTPPDLGWDDL

TYJ98087.1 Enzymatic polyprotein [Cucumis melo var. makuwa]2.7e-3937.42Show/hide
Query:  MSGRSSVSEF--HPIREKPVTRSKSMRMSVDFDQPIPDIQYEKFEGSISPTQIDMERKSGYIYNHINVISSIEQRYDQMYDKYINCYLK-----QKDWVN
        MS R S S           + RS+S+R SVDF   IPD+ YEK + S+SPTQ DMER+S  +YN INVIS  ++R+ + Y  YI+ ++K     +K ++ 
Subjt:  MSGRSSVSEF--HPIREKPVTRSKSMRMSVDFDQPIPDIQYEKFEGSISPTQIDMERKSGYIYNHINVISSIEQRYDQMYDKYINCYLK-----QKDWVN

Query:  IPKF------HTRAEYIALVKQKAAQQSVSVVKKPYKWVTASGKEVLSDYPHEEEASFPHPQMSAISIVSSPYKTIDEEKTESFGVREIKN-------TQ
        +P F        RA+  ALVK+  A   ++++K    WVT SGKEV S+YP EEEA FPHP + AI ++SSPYKTI+E+K +  GVREIKN       T 
Subjt:  IPKF------HTRAEYIALVKQKAAQQSVSVVKKPYKWVTASGKEVLSDYPHEEEASFPHPQMSAISIVSSPYKTIDEEKTESFGVREIKN-------TQ

Query:  QINKKISKLMTDDE-------------------------GGVGTSKKKEVANFGISKVNL--------------------DNLNTIQR----RATRPNIL
        +I   +SK +   E                               K KE A+  ++++N                       +N I++    +A+   IL
Subjt:  QINKKISKLMTDDE-------------------------GGVGTSKKKEVANFGISKVNL--------------------DNLNTIQR----RATRPNIL

Query:  PVKTYNTDMKNHYRKPTPPDLGWDDL
        PV  +  DMKNHY +P+PPDLGWDDL
Subjt:  PVKTYNTDMKNHYRKPTPPDLGWDDL

TrEMBL top hitse value%identityAlignment
A0A5A7U9B4 Polyprotein1.2e-4844.96Show/hide
Query:  SGRSSVSEFHP-IREKPVTRSKSMRMSVDFDQPIPDIQYEKFEGSISPTQIDMERKSGYIYNHINVIS-SIEQRYDQMYDKYINCYLKQKDWVNIPKFHT
        SGRSS+SE+ P  RE+P+T+S SMRM VDF+Q IPD QYEK EGS+SPTQ  MER+SG IYN IN I+   +  YDQ Y+KYI+ Y+ QK+W N PKF +
Subjt:  SGRSSVSEFHP-IREKPVTRSKSMRMSVDFDQPIPDIQYEKFEGSISPTQIDMERKSGYIYNHINVIS-SIEQRYDQMYDKYINCYLKQKDWVNIPKFHT

Query:  RAEYIALVKQKAAQQSVSVVKKPYKWVTASGKEVLSDYPHEEEASFPHPQMSAISIVSSPYKTIDEEKTESFGVREIKNTQQINKKISKLMTDDEGGVGT
        + E+IA V QKA + SV V+ KP  W T +GKE+LS+YP EEEASFPHP+M + +IV S YKTIDEE+T++                             
Subjt:  RAEYIALVKQKAAQQSVSVVKKPYKWVTASGKEVLSDYPHEEEASFPHPQMSAISIVSSPYKTIDEEKTESFGVREIKNTQQINKKISKLMTDDEGGVGT

Query:  SKKKEVANFGISKVNLDNLNTIQRRATRPNILPVKTYNTDMKNHYRKPTPPDLGWDDL
                                                  NHY++P+PPDLGWDDL
Subjt:  SKKKEVANFGISKVNLDNLNTIQRRATRPNILPVKTYNTDMKNHYRKPTPPDLGWDDL

A0A5A7UF59 Enzymatic polyprotein1.3e-3937.42Show/hide
Query:  MSGRSSVSEF--HPIREKPVTRSKSMRMSVDFDQPIPDIQYEKFEGSISPTQIDMERKSGYIYNHINVISSIEQRYDQMYDKYINCYLK-----QKDWVN
        MS R S S           + RS+S+R SVDF   IPD+ YEK + S+SPTQ DMER+S  +YN INVIS  ++R+ + Y  YI+ ++K     +K ++ 
Subjt:  MSGRSSVSEF--HPIREKPVTRSKSMRMSVDFDQPIPDIQYEKFEGSISPTQIDMERKSGYIYNHINVISSIEQRYDQMYDKYINCYLK-----QKDWVN

Query:  IPKF------HTRAEYIALVKQKAAQQSVSVVKKPYKWVTASGKEVLSDYPHEEEASFPHPQMSAISIVSSPYKTIDEEKTESFGVREIKN-------TQ
        +P F        RA+  ALVK+  A   ++++K    WVT SGKEV S+YP EEEA FPHP + AI ++SSPYKTI+E+K +  GVREIKN       T 
Subjt:  IPKF------HTRAEYIALVKQKAAQQSVSVVKKPYKWVTASGKEVLSDYPHEEEASFPHPQMSAISIVSSPYKTIDEEKTESFGVREIKN-------TQ

Query:  QINKKISKLMTDDE-------------------------GGVGTSKKKEVANFGISKVNL--------------------DNLNTIQR----RATRPNIL
        +I   +SK +   E                               K KE A+  ++++N                       +N I++    +A+   IL
Subjt:  QINKKISKLMTDDE-------------------------GGVGTSKKKEVANFGISKVNL--------------------DNLNTIQR----RATRPNIL

Query:  PVKTYNTDMKNHYRKPTPPDLGWDDL
        PV  +  DMKNHY +P+PPDLGWDDL
Subjt:  PVKTYNTDMKNHYRKPTPPDLGWDDL

A0A5D3BEY3 Enzymatic polyprotein1.3e-3938.96Show/hide
Query:  MSGRSSVSEF--HPIREKPVTRSKSMRMSVDFDQPIPDIQYEKFEGSISPTQIDMERKSGYIYNHINVISSIEQRYDQMYDKYINCYLK-----QKDWVN
        MS R S S         + + RS+S+R SVDF   IPD+ YEK +GS+SPTQ DMER+S  +YN INVIS+ ++R+ + Y  YI+ ++K     +K ++ 
Subjt:  MSGRSSVSEF--HPIREKPVTRSKSMRMSVDFDQPIPDIQYEKFEGSISPTQIDMERKSGYIYNHINVISSIEQRYDQMYDKYINCYLK-----QKDWVN

Query:  IPKF------HTRAEYIALVKQKAAQQSVSVVKKPYKWVTASGKEVLSDYPHEEEASFPHPQMSAISIVSSPYKTIDEEKTESFGVREIKNTQ-QIN---
        +P F        RA+  AL K+  A   V+++K    WVTASGKEV S+YP EEEA F HP + AI +VSSPYKTI+E+K +  GVREIKN Q Q+N   
Subjt:  IPKF------HTRAEYIALVKQKAAQQSVSVVKKPYKWVTASGKEVLSDYPHEEEASFPHPQMSAISIVSSPYKTIDEEKTESFGVREIKNTQ-QIN---

Query:  ---KKISKLMTDDEGGVGTSKKK--------------EVANFGI--------------------------SKVNLDN-----LNTIQR----RATRPNIL
             +SK +   E      K K              +  +F I                          SKV ++      +N I++    +A+   IL
Subjt:  ---KKISKLMTDDEGGVGTSKKK--------------EVANFGI--------------------------SKVNLDN-----LNTIQR----RATRPNIL

Query:  PVKTYNTDMKNHYRKPTPPDLGWDDL
        PV  +  DMKNHY +P+PPDLGWDDL
Subjt:  PVKTYNTDMKNHYRKPTPPDLGWDDL

A0A5D3BG41 Enzymatic polyprotein1.3e-3937.42Show/hide
Query:  MSGRSSVSEF--HPIREKPVTRSKSMRMSVDFDQPIPDIQYEKFEGSISPTQIDMERKSGYIYNHINVISSIEQRYDQMYDKYINCYLK-----QKDWVN
        MS R S S           + RS+S+R SVDF   IPD+ YEK + S+SPTQ DMER+S  +YN INVIS  ++R+ + Y  YI+ ++K     +K ++ 
Subjt:  MSGRSSVSEF--HPIREKPVTRSKSMRMSVDFDQPIPDIQYEKFEGSISPTQIDMERKSGYIYNHINVISSIEQRYDQMYDKYINCYLK-----QKDWVN

Query:  IPKF------HTRAEYIALVKQKAAQQSVSVVKKPYKWVTASGKEVLSDYPHEEEASFPHPQMSAISIVSSPYKTIDEEKTESFGVREIKN-------TQ
        +P F        RA+  ALVK+  A   ++++K    WVT SGKEV S+YP EEEA FPHP + AI ++SSPYKTI+E+K +  GVREIKN       T 
Subjt:  IPKF------HTRAEYIALVKQKAAQQSVSVVKKPYKWVTASGKEVLSDYPHEEEASFPHPQMSAISIVSSPYKTIDEEKTESFGVREIKN-------TQ

Query:  QINKKISKLMTDDE-------------------------GGVGTSKKKEVANFGISKVNL--------------------DNLNTIQR----RATRPNIL
        +I   +SK +   E                               K KE A+  ++++N                       +N I++    +A+   IL
Subjt:  QINKKISKLMTDDE-------------------------GGVGTSKKKEVANFGISKVNL--------------------DNLNTIQR----RATRPNIL

Query:  PVKTYNTDMKNHYRKPTPPDLGWDDL
        PV  +  DMKNHY +P+PPDLGWDDL
Subjt:  PVKTYNTDMKNHYRKPTPPDLGWDDL

A0A5D3C4I7 Movement protein1.5e-4340.68Show/hide
Query:  MSGRSSVSEF--HPIREKPVTRSKSMRMSVDFDQPIPDIQYEKFEGSISPTQIDMERKSGYIYNHINVISSIEQRYDQMYDKYINCYLK-----QKDWVN
        MS R S S        +  + RS+S+R SVDF   IPD+ YEK +GS+ PTQ DME++S  +YN INVIS  ++R+ + Y  YI+ ++K     +K ++ 
Subjt:  MSGRSSVSEF--HPIREKPVTRSKSMRMSVDFDQPIPDIQYEKFEGSISPTQIDMERKSGYIYNHINVISSIEQRYDQMYDKYINCYLK-----QKDWVN

Query:  IPKF------HTRAEYIALVKQKAAQQSVSVVKKPYKWVTASGKEVLSDYPHEEEASFPHPQMSAISIVSSPYKTIDEEKTESFGVREIKNTQ-QINKKI
        +P F        R +  ALVK+  A   V+++K    WVTASGKE+ S+YP EEEA FPHP + AI +VSSPYKTI+E+K +  GVREIKN Q Q+N   
Subjt:  IPKF------HTRAEYIALVKQKAAQQSVSVVKKPYKWVTASGKEVLSDYPHEEEASFPHPQMSAISIVSSPYKTIDEEKTESFGVREIKNTQ-QINKKI

Query:  SKLMTDDEGGVGTSKKKEVANFGISKVNL--------------------DNLNTIQR----RATRPNILPVKTYNTDMKNHYRKPTPPDLGWDDL
            TD        + KE A+  ++++N                       +N I++    + +   ILPV  +  DMKNHY +P+PPDLGWDDL
Subjt:  SKLMTDDEGGVGTSKKKEVANFGISKVNL--------------------DNLNTIQR----RATRPNILPVKTYNTDMKNHYRKPTPPDLGWDDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGGACGATCTAGTGTATCGGAGTTTCATCCTATTAGGGAAAAGCCTGTAACCAGGTCAAAATCAATGCGAATGTCGGTAGACTTTGATCAACCAATCCCCGATAT
TCAATATGAAAAGTTTGAGGGCTCTATTTCACCAACCCAGATTGACATGGAACGGAAATCTGGATATATTTACAACCATATAAACGTTATCTCAAGCATCGAGCAGAGGT
ACGATCAGATGTACGATAAATACATCAATTGTTATCTAAAACAAAAGGATTGGGTCAACATACCCAAATTTCATACTAGAGCCGAGTACATCGCTCTTGTTAAACAAAAG
GCTGCTCAACAAAGTGTTAGCGTCGTCAAAAAACCCTATAAGTGGGTAACAGCTTCAGGAAAAGAAGTTCTTTCGGATTATCCGCATGAAGAAGAAGCATCTTTTCCTCA
CCCACAAATGTCGGCAATATCAATAGTATCTTCTCCTTACAAGACTATTGATGAAGAAAAAACCGAATCTTTTGGAGTCCGTGAAATAAAAAATACCCAACAAATTAACA
AGAAGATCTCAAAACTAATGACAGACGATGAAGGTGGAGTCGGAACGTCTAAAAAGAAAGAAGTTGCTAACTTTGGTATTTCCAAAGTAAATTTGGACAACCTCAATACG
ATTCAAAGGAGGGCTACTCGTCCCAACATTCTTCCTGTCAAAACATATAACACTGATATGAAGAATCATTACAGAAAACCCACTCCTCCAGATCTTGGATGGGATGATTT
AACTCTCGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGGACGATCTAGTGTATCGGAGTTTCATCCTATTAGGGAAAAGCCTGTAACCAGGTCAAAATCAATGCGAATGTCGGTAGACTTTGATCAACCAATCCCCGATAT
TCAATATGAAAAGTTTGAGGGCTCTATTTCACCAACCCAGATTGACATGGAACGGAAATCTGGATATATTTACAACCATATAAACGTTATCTCAAGCATCGAGCAGAGGT
ACGATCAGATGTACGATAAATACATCAATTGTTATCTAAAACAAAAGGATTGGGTCAACATACCCAAATTTCATACTAGAGCCGAGTACATCGCTCTTGTTAAACAAAAG
GCTGCTCAACAAAGTGTTAGCGTCGTCAAAAAACCCTATAAGTGGGTAACAGCTTCAGGAAAAGAAGTTCTTTCGGATTATCCGCATGAAGAAGAAGCATCTTTTCCTCA
CCCACAAATGTCGGCAATATCAATAGTATCTTCTCCTTACAAGACTATTGATGAAGAAAAAACCGAATCTTTTGGAGTCCGTGAAATAAAAAATACCCAACAAATTAACA
AGAAGATCTCAAAACTAATGACAGACGATGAAGGTGGAGTCGGAACGTCTAAAAAGAAAGAAGTTGCTAACTTTGGTATTTCCAAAGTAAATTTGGACAACCTCAATACG
ATTCAAAGGAGGGCTACTCGTCCCAACATTCTTCCTGTCAAAACATATAACACTGATATGAAGAATCATTACAGAAAACCCACTCCTCCAGATCTTGGATGGGATGATTT
AACTCTCGAGTGA
Protein sequenceShow/hide protein sequence
MSGRSSVSEFHPIREKPVTRSKSMRMSVDFDQPIPDIQYEKFEGSISPTQIDMERKSGYIYNHINVISSIEQRYDQMYDKYINCYLKQKDWVNIPKFHTRAEYIALVKQK
AAQQSVSVVKKPYKWVTASGKEVLSDYPHEEEASFPHPQMSAISIVSSPYKTIDEEKTESFGVREIKNTQQINKKISKLMTDDEGGVGTSKKKEVANFGISKVNLDNLNT
IQRRATRPNILPVKTYNTDMKNHYRKPTPPDLGWDDLTLE