; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg028992 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028992
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 3-like
Genome locationscaffold5:16558082..16559776
RNA-Seq ExpressionSpg028992
SyntenySpg028992
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039149.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa]1.0e-3050.93Show/hide
Query:  VMTTNISESFNSVVLEAKVLSITSMLEVIRMLLQRWFYERKNDADYQVTYLTKSVELKLRELIEQGRQMQVNPVNNHLYQVVSGSDQFDVDLINWTFHPI
        VMTTNISES NS +L+AK L I SMLEV+RM+LQ WF+ER+N+ DYQVT  TK++E  LR+ IE+ R M+VN VNN  YQ +  + Q+ + L    F   
Subjt:  VMTTNISESFNSVVLEAKVLSITSMLEVIRMLLQRWFYERKNDADYQVTYLTKSVELKLRELIEQGRQMQVNPVNNHLYQVVSGSDQFDVDLINWTFHPI

Query:  DNEASWVILEDLKTVKILPPNVKSAAGRPKKVRIPSTMEFKRRVKCDHCGRVCHNRKTCKF
            S  +L    T+ I+   +    GRPKKVRIPS M+FKRR+KC   GRV HN K   F
Subjt:  DNEASWVILEDLKTVKILPPNVKSAAGRPKKVRIPSTMEFKRRVKCDHCGRVCHNRKTCKF

KAA0051992.1 protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo var. makuwa]1.9e-3752.87Show/hide
Query:  VMTTNISESFNSVVLEAKVLSITSMLEVIRMLLQRWFYERKNDADYQVTYLTKSVELKLRELIEQGRQMQVNPVNNHLYQVVSGSDQFDVDL--------
        VMTTNI ES NS +L+A+ L I SMLEV+RM+LQRWF+ER+NDADYQVT  TK++   LRE IE  R M+VN VNN  YQV++G+ Q+ + L        
Subjt:  VMTTNISESFNSVVLEAKVLSITSMLEVIRMLLQRWFYERKNDADYQVTYLTKSVELKLRELIEQGRQMQVNPVNNHLYQVVSGSDQFDVDL--------

Query:  --INWT--------FHPIDNEASWVILEDLKTVKILPPNVKSAAGRPKKVRIPSTMEFKRRVKCDHCGRVCHNR
          +N T         +P+ +   W I +D+ ++ ILPPNVK A GRPKK +I S +EFKRRVKC  CGRV HNR
Subjt:  --INWT--------FHPIDNEASWVILEDLKTVKILPPNVKSAAGRPKKVRIPSTMEFKRRVKCDHCGRVCHNR

TYK26962.1 protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo var. makuwa]1.0e-3050.93Show/hide
Query:  VMTTNISESFNSVVLEAKVLSITSMLEVIRMLLQRWFYERKNDADYQVTYLTKSVELKLRELIEQGRQMQVNPVNNHLYQVVSGSDQFDVDLINWTFHPI
        VMTTNISES NS +L+AK L I SMLEV+RM+LQ WF+ER+N+ DYQVT  TK++E  LR+ IE+ R M+VN VNN  YQ +  + Q+ + L    F   
Subjt:  VMTTNISESFNSVVLEAKVLSITSMLEVIRMLLQRWFYERKNDADYQVTYLTKSVELKLRELIEQGRQMQVNPVNNHLYQVVSGSDQFDVDLINWTFHPI

Query:  DNEASWVILEDLKTVKILPPNVKSAAGRPKKVRIPSTMEFKRRVKCDHCGRVCHNRKTCKF
            S  +L    T+ I+   +    GRPKKVRIPS M+FKRR+KC   GRV HN K   F
Subjt:  DNEASWVILEDLKTVKILPPNVKSAAGRPKKVRIPSTMEFKRRVKCDHCGRVCHNRKTCKF

XP_022134813.1 uncharacterized protein LOC111006994 [Momordica charantia]2.7e-3152.32Show/hide
Query:  MTTNISESFNSVVLEAKVLSITSMLEVIRMLLQRWFYERKNDADYQVTYLTKSVELKLRELIEQGRQMQVNPVNNHLYQVVSGSDQFDVDL---------
        MTTNISES N+ + +A+ L ITSMLEV+RM+LQRWFYERKN AD+Q+T  TKSVE KLRE I  GR M V  VNN +YQV+    Q +  L         
Subjt:  MTTNISESFNSVVLEAKVLSITSMLEVIRMLLQRWFYERKNDADYQVTYLTKSVELKLRELIEQGRQMQVNPVNNHLYQVVSGSDQFDVDL---------

Query:  ---------INWTFHPIDNEASWVILEDLKTVKILPPNVKSAAGRPKKVRI
                  + + HP+ +++SW I ED+K +K+LPPNVK  AGRPKK+RI
Subjt:  ---------INWTFHPIDNEASWVILEDLKTVKILPPNVKSAAGRPKKVRI

XP_022155207.1 uncharacterized protein LOC111022347 [Momordica charantia]6.4e-4154.34Show/hide
Query:  MTTNISESFNSVVLEAKVLSITSMLEVIRMLLQRWFYERKNDADYQVTYLTKSVELKLRELIEQGRQMQVNPVNNHLYQ-------VVSG--SDQFDVDL
        MTTNIS+S N+ + +A  L ITSMLEV+RM+LQRWFY+R+ND D+Q+T  TKS E KL E I   R M+V  VNN +YQ        VS   S+ +    
Subjt:  MTTNISESFNSVVLEAKVLSITSMLEVIRMLLQRWFYERKNDADYQVTYLTKSVELKLRELIEQGRQMQVNPVNNHLYQ-------VVSG--SDQFDVDL

Query:  INWTFHPIDNEASWVILEDLKTVKILPPNVKSAAGRPKKVRIPSTMEFKRRVKCDHCGRVCHNRKTCKFTLTQ
         + + HP+ +++SW I ED+K +K+L PNVK  AGRPKK+RIPS +EFK+RVKC  CGR  HNRK+CKF+LTQ
Subjt:  INWTFHPIDNEASWVILEDLKTVKILPPNVKSAAGRPKKVRIPSTMEFKRRVKCDHCGRVCHNRKTCKFTLTQ

TrEMBL top hitse value%identityAlignment
A0A5A7TCZ3 Protein FAR-RED ELONGATED HYPOCOTYL 3-like5.0e-3150.93Show/hide
Query:  VMTTNISESFNSVVLEAKVLSITSMLEVIRMLLQRWFYERKNDADYQVTYLTKSVELKLRELIEQGRQMQVNPVNNHLYQVVSGSDQFDVDLINWTFHPI
        VMTTNISES NS +L+AK L I SMLEV+RM+LQ WF+ER+N+ DYQVT  TK++E  LR+ IE+ R M+VN VNN  YQ +  + Q+ + L    F   
Subjt:  VMTTNISESFNSVVLEAKVLSITSMLEVIRMLLQRWFYERKNDADYQVTYLTKSVELKLRELIEQGRQMQVNPVNNHLYQVVSGSDQFDVDLINWTFHPI

Query:  DNEASWVILEDLKTVKILPPNVKSAAGRPKKVRIPSTMEFKRRVKCDHCGRVCHNRKTCKF
            S  +L    T+ I+   +    GRPKKVRIPS M+FKRR+KC   GRV HN K   F
Subjt:  DNEASWVILEDLKTVKILPPNVKSAAGRPKKVRIPSTMEFKRRVKCDHCGRVCHNRKTCKF

A0A5D3C2C0 Protein FAR1-RELATED SEQUENCE 3-like9.3e-3852.87Show/hide
Query:  VMTTNISESFNSVVLEAKVLSITSMLEVIRMLLQRWFYERKNDADYQVTYLTKSVELKLRELIEQGRQMQVNPVNNHLYQVVSGSDQFDVDL--------
        VMTTNI ES NS +L+A+ L I SMLEV+RM+LQRWF+ER+NDADYQVT  TK++   LRE IE  R M+VN VNN  YQV++G+ Q+ + L        
Subjt:  VMTTNISESFNSVVLEAKVLSITSMLEVIRMLLQRWFYERKNDADYQVTYLTKSVELKLRELIEQGRQMQVNPVNNHLYQVVSGSDQFDVDL--------

Query:  --INWT--------FHPIDNEASWVILEDLKTVKILPPNVKSAAGRPKKVRIPSTMEFKRRVKCDHCGRVCHNR
          +N T         +P+ +   W I +D+ ++ ILPPNVK A GRPKK +I S +EFKRRVKC  CGRV HNR
Subjt:  --INWT--------FHPIDNEASWVILEDLKTVKILPPNVKSAAGRPKKVRIPSTMEFKRRVKCDHCGRVCHNR

A0A5D3DTY1 Protein FAR1-RELATED SEQUENCE 3-like5.0e-3150.93Show/hide
Query:  VMTTNISESFNSVVLEAKVLSITSMLEVIRMLLQRWFYERKNDADYQVTYLTKSVELKLRELIEQGRQMQVNPVNNHLYQVVSGSDQFDVDLINWTFHPI
        VMTTNISES NS +L+AK L I SMLEV+RM+LQ WF+ER+N+ DYQVT  TK++E  LR+ IE+ R M+VN VNN  YQ +  + Q+ + L    F   
Subjt:  VMTTNISESFNSVVLEAKVLSITSMLEVIRMLLQRWFYERKNDADYQVTYLTKSVELKLRELIEQGRQMQVNPVNNHLYQVVSGSDQFDVDLINWTFHPI

Query:  DNEASWVILEDLKTVKILPPNVKSAAGRPKKVRIPSTMEFKRRVKCDHCGRVCHNRKTCKF
            S  +L    T+ I+   +    GRPKKVRIPS M+FKRR+KC   GRV HN K   F
Subjt:  DNEASWVILEDLKTVKILPPNVKSAAGRPKKVRIPSTMEFKRRVKCDHCGRVCHNRKTCKF

A0A6J1C328 uncharacterized protein LOC1110069941.3e-3152.32Show/hide
Query:  MTTNISESFNSVVLEAKVLSITSMLEVIRMLLQRWFYERKNDADYQVTYLTKSVELKLRELIEQGRQMQVNPVNNHLYQVVSGSDQFDVDL---------
        MTTNISES N+ + +A+ L ITSMLEV+RM+LQRWFYERKN AD+Q+T  TKSVE KLRE I  GR M V  VNN +YQV+    Q +  L         
Subjt:  MTTNISESFNSVVLEAKVLSITSMLEVIRMLLQRWFYERKNDADYQVTYLTKSVELKLRELIEQGRQMQVNPVNNHLYQVVSGSDQFDVDL---------

Query:  ---------INWTFHPIDNEASWVILEDLKTVKILPPNVKSAAGRPKKVRI
                  + + HP+ +++SW I ED+K +K+LPPNVK  AGRPKK+RI
Subjt:  ---------INWTFHPIDNEASWVILEDLKTVKILPPNVKSAAGRPKKVRI

A0A6J1DNQ8 uncharacterized protein LOC1110223473.1e-4154.34Show/hide
Query:  MTTNISESFNSVVLEAKVLSITSMLEVIRMLLQRWFYERKNDADYQVTYLTKSVELKLRELIEQGRQMQVNPVNNHLYQ-------VVSG--SDQFDVDL
        MTTNIS+S N+ + +A  L ITSMLEV+RM+LQRWFY+R+ND D+Q+T  TKS E KL E I   R M+V  VNN +YQ        VS   S+ +    
Subjt:  MTTNISESFNSVVLEAKVLSITSMLEVIRMLLQRWFYERKNDADYQVTYLTKSVELKLRELIEQGRQMQVNPVNNHLYQ-------VVSG--SDQFDVDL

Query:  INWTFHPIDNEASWVILEDLKTVKILPPNVKSAAGRPKKVRIPSTMEFKRRVKCDHCGRVCHNRKTCKFTLTQ
         + + HP+ +++SW I ED+K +K+L PNVK  AGRPKK+RIPS +EFK+RVKC  CGR  HNRK+CKF+LTQ
Subjt:  INWTFHPIDNEASWVILEDLKTVKILPPNVKSAAGRPKKVRIPSTMEFKRRVKCDHCGRVCHNRKTCKFTLTQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCATTTCTGCCGACGCGGTGGTCAACGCGTCGGCAGAAAGCGATGGACTCGATTTTCTCCCGACGCATTGGCTATCGCGTCGGCAGAGAGCATTTCTGCCGACGCA
CGGTCAACGCGTAGGCAGAAAATCGAGTCCATCGCTTTCTGTCGATGCGTTGACCACCGCGTCGGCAGAAATGCTCTCTGCCGACGCGATAGTCAACGCGTCGGCAGAAA
GCGCCCATAATTGTTCCCCACATTATGTGTCGGCAGATACGGCCAAAATAAAGTCATTCCCAACAGTTATGACCACTAATATATCTGAAAGTTTTAACTCCGTTGTCTTA
GAAGCTAAAGTGTTGTCGATAACTTCTATGTTAGAAGTAATAAGAATGCTTTTGCAGAGGTGGTTTTATGAACGAAAAAATGATGCAGACTACCAAGTTACTTATTTGAC
CAAATCAGTTGAGTTAAAATTACGTGAGTTGATCGAGCAAGGTCGTCAAATGCAGGTAAACCCAGTTAATAACCATTTGTATCAAGTCGTCAGTGGTTCAGATCAGTTCG
ACGTTGACCTCATCAACTGGACTTTTCATCCAATTGACAATGAAGCTTCTTGGGTTATTCTAGAAGATTTGAAGACCGTGAAAATACTACCACCAAATGTCAAGAGTGCA
GCTGGAAGGCCAAAGAAAGTAAGGATCCCTTCAACAATGGAATTTAAGAGGAGAGTTAAATGTGATCATTGCGGACGAGTTTGTCACAACAGGAAGACGTGCAAATTCAC
CCTTACCCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCATTTCTGCCGACGCGGTGGTCAACGCGTCGGCAGAAAGCGATGGACTCGATTTTCTCCCGACGCATTGGCTATCGCGTCGGCAGAGAGCATTTCTGCCGACGCA
CGGTCAACGCGTAGGCAGAAAATCGAGTCCATCGCTTTCTGTCGATGCGTTGACCACCGCGTCGGCAGAAATGCTCTCTGCCGACGCGATAGTCAACGCGTCGGCAGAAA
GCGCCCATAATTGTTCCCCACATTATGTGTCGGCAGATACGGCCAAAATAAAGTCATTCCCAACAGTTATGACCACTAATATATCTGAAAGTTTTAACTCCGTTGTCTTA
GAAGCTAAAGTGTTGTCGATAACTTCTATGTTAGAAGTAATAAGAATGCTTTTGCAGAGGTGGTTTTATGAACGAAAAAATGATGCAGACTACCAAGTTACTTATTTGAC
CAAATCAGTTGAGTTAAAATTACGTGAGTTGATCGAGCAAGGTCGTCAAATGCAGGTAAACCCAGTTAATAACCATTTGTATCAAGTCGTCAGTGGTTCAGATCAGTTCG
ACGTTGACCTCATCAACTGGACTTTTCATCCAATTGACAATGAAGCTTCTTGGGTTATTCTAGAAGATTTGAAGACCGTGAAAATACTACCACCAAATGTCAAGAGTGCA
GCTGGAAGGCCAAAGAAAGTAAGGATCCCTTCAACAATGGAATTTAAGAGGAGAGTTAAATGTGATCATTGCGGACGAGTTTGTCACAACAGGAAGACGTGCAAATTCAC
CCTTACCCAATAG
Protein sequenceShow/hide protein sequence
MGISADAVVNASAESDGLDFLPTHWLSRRQRAFLPTHGQRVGRKSSPSLSVDALTTASAEMLSADAIVNASAESAHNCSPHYVSADTAKIKSFPTVMTTNISESFNSVVL
EAKVLSITSMLEVIRMLLQRWFYERKNDADYQVTYLTKSVELKLRELIEQGRQMQVNPVNNHLYQVVSGSDQFDVDLINWTFHPIDNEASWVILEDLKTVKILPPNVKSA
AGRPKKVRIPSTMEFKRRVKCDHCGRVCHNRKTCKFTLTQ