; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg029029 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg029029
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein SDA1
Genome locationscaffold5:16169458..16173810
RNA-Seq ExpressionSpg029029
SyntenySpg029029
Gene Ontology termsGO:0000055 - ribosomal large subunit export from nucleus (biological process)
GO:0015031 - protein transport (biological process)
GO:0015074 - DNA integration (biological process)
GO:0030036 - actin cytoskeleton organization (biological process)
GO:0042273 - ribosomal large subunit biogenesis (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR007949 - SDA1 domain
IPR027312 - Sda1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575976.1 Protein SDA1-like protein, partial [Cucurbita argyrosperma subsp. sororia]8.6e-7172.25Show/hide
Query:  ETESISDEIVETGSMDAGTSPRNFMLKKRKRSNFDRQLVTCDSSLRALRKLSGKVVGKTLGSTDGILSNEDFQRIKELQAKKAAKDALTQHGLLRN----
        E +++SDEIVETGS+DA T+ R+  LKKRK S+FD+Q +T +SSLRAL+KL+  V GK+   TDGILSNEDF+RIKEL+AKK AK ALTQHGLLRN    
Subjt:  ETESISDEIVETGSMDAGTSPRNFMLKKRKRSNFDRQLVTCDSSLRALRKLSGKVVGKTLGSTDGILSNEDFQRIKELQAKKAAKDALTQHGLLRN----

Query:  -GSAFKISNTEELSTKRVNPAKFEVHIRRKLSKDEKLALVRAGREDRGKYQAQAAVKQKKTGGSSNQQKEHKKAMPLAAKRAKVAKTRVDKRKKNQRSGK
          +AFK+ +T+ELSTKR++P+K EVHIRR++SK+EKLALV+AGREDRGKYQA+AAVKQKKTGG SN+QKEHKKAMPLAAKR++VAK+RVDKRKK+QRSGK
Subjt:  -GSAFKISNTEELSTKRVNPAKFEVHIRRKLSKDEKLALVRAGREDRGKYQAQAAVKQKKTGGSSNQQKEHKKAMPLAAKRAKVAKTRVDKRKKNQRSGK

Query:  QFRGRKAWK
        QFRG+KAWK
Subjt:  QFRGRKAWK

KAG7014500.1 Protein SDA1-like protein [Cucurbita argyrosperma subsp. argyrosperma]8.6e-7172.25Show/hide
Query:  ETESISDEIVETGSMDAGTSPRNFMLKKRKRSNFDRQLVTCDSSLRALRKLSGKVVGKTLGSTDGILSNEDFQRIKELQAKKAAKDALTQHGLLRN----
        E +++SDEIVETGS+DA T+ R+  LKKRK S+FD+Q +T +SSLRAL+KL+  V GK+   TDGILSNEDF+RIKEL+AKK AK ALTQHGLLRN    
Subjt:  ETESISDEIVETGSMDAGTSPRNFMLKKRKRSNFDRQLVTCDSSLRALRKLSGKVVGKTLGSTDGILSNEDFQRIKELQAKKAAKDALTQHGLLRN----

Query:  -GSAFKISNTEELSTKRVNPAKFEVHIRRKLSKDEKLALVRAGREDRGKYQAQAAVKQKKTGGSSNQQKEHKKAMPLAAKRAKVAKTRVDKRKKNQRSGK
          +AFK+ +T+ELSTKR++P+K EVHIRR++SK+EKLALV+AGREDRGKYQA+AAVKQKKTGG SN+QKEHKKAMPLAAKR++VAK+RVDKRKK+QRSGK
Subjt:  -GSAFKISNTEELSTKRVNPAKFEVHIRRKLSKDEKLALVRAGREDRGKYQAQAAVKQKKTGGSSNQQKEHKKAMPLAAKRAKVAKTRVDKRKKNQRSGK

Query:  QFRGRKAWK
        QFRG+KAWK
Subjt:  QFRGRKAWK

XP_022149440.1 protein SDA1 homolog [Momordica charantia]1.4e-7676.89Show/hide
Query:  QQRETESISDEIVETGSMDAGTSPRNFMLKKRKRSNFDRQLVTCDSSLRALRKLSGKVVGKTLGSTDGILSNEDFQRIKELQAKKAAKDALTQHGLLRNG
        ++ + ++ISD++V+TGSMDAGTS R+ ML KRKRS+FD+QLVT DSSLRAL+KL+G V  K   STDGILSNEDF+RIKEL+AKK AK+ALTQHGLLRNG
Subjt:  QQRETESISDEIVETGSMDAGTSPRNFMLKKRKRSNFDRQLVTCDSSLRALRKLSGKVVGKTLGSTDGILSNEDFQRIKELQAKKAAKDALTQHGLLRNG

Query:  S-----AFKISNTEELSTKRVNPAKFEVHIRRKLSKDEKLALVRAGREDRGKYQAQAAVKQKKTGGSSNQQKEHKKAMPLAAKRAKVAKTRVDKRKKNQR
        S     AFKI +T+EL TKRV+P+K EVHIRR+LSK+EKLALV+AGREDRGKYQA+AAVKQKKTGG SNQQKEHKKAMPLAAKRAK+AKTRVDKRKK+QR
Subjt:  S-----AFKISNTEELSTKRVNPAKFEVHIRRKLSKDEKLALVRAGREDRGKYQAQAAVKQKKTGGSSNQQKEHKKAMPLAAKRAKVAKTRVDKRKKNQR

Query:  SGKQFRGRKAWK
        SGKQFRG+KAWK
Subjt:  SGKQFRGRKAWK

XP_022953635.1 protein SDA1 homolog [Cucurbita moschata]5.1e-7172.25Show/hide
Query:  ETESISDEIVETGSMDAGTSPRNFMLKKRKRSNFDRQLVTCDSSLRALRKLSGKVVGKTLGSTDGILSNEDFQRIKELQAKKAAKDALTQHGLLRN----
        E++++SDEIVETGS+DA T+ R+  LKKRK S+FD+Q +T +SSLRAL+KL+  V GK+   TDGILSNEDF+RIKEL+AKK AK ALTQHGLLRN    
Subjt:  ETESISDEIVETGSMDAGTSPRNFMLKKRKRSNFDRQLVTCDSSLRALRKLSGKVVGKTLGSTDGILSNEDFQRIKELQAKKAAKDALTQHGLLRN----

Query:  -GSAFKISNTEELSTKRVNPAKFEVHIRRKLSKDEKLALVRAGREDRGKYQAQAAVKQKKTGGSSNQQKEHKKAMPLAAKRAKVAKTRVDKRKKNQRSGK
          +AFK+ +T+ELSTKR++P+K EVHIRR++SK+EKLALV+AGREDRGKYQA+AAVKQKKTGG SN+QKEHKKAMPLAAKR++VAK+RVDKRKK+QRSGK
Subjt:  -GSAFKISNTEELSTKRVNPAKFEVHIRRKLSKDEKLALVRAGREDRGKYQAQAAVKQKKTGGSSNQQKEHKKAMPLAAKRAKVAKTRVDKRKKNQRSGK

Query:  QFRGRKAWK
        QFRG+KAWK
Subjt:  QFRGRKAWK

XP_023548412.1 protein SDA1 homolog [Cucurbita pepo subsp. pepo]8.6e-7172.25Show/hide
Query:  ETESISDEIVETGSMDAGTSPRNFMLKKRKRSNFDRQLVTCDSSLRALRKLSGKVVGKTLGSTDGILSNEDFQRIKELQAKKAAKDALTQHGLLRN----
        E +++SDEIVETGS+DA T+ R+  LKKRK S+FD+Q +T +SSLRAL+KL+  V GK+   TDGILSNEDF+RIKEL+AKK AK ALTQHGLLRN    
Subjt:  ETESISDEIVETGSMDAGTSPRNFMLKKRKRSNFDRQLVTCDSSLRALRKLSGKVVGKTLGSTDGILSNEDFQRIKELQAKKAAKDALTQHGLLRN----

Query:  -GSAFKISNTEELSTKRVNPAKFEVHIRRKLSKDEKLALVRAGREDRGKYQAQAAVKQKKTGGSSNQQKEHKKAMPLAAKRAKVAKTRVDKRKKNQRSGK
          +AFK+ +T+ELSTKR++P+K EVHIRR++SK+EKLALV+AGREDRGKYQA+AAVKQKKTGG SN+QKEHKKAMPLAAKR++VAK+RVDKRKK+QRSGK
Subjt:  -GSAFKISNTEELSTKRVNPAKFEVHIRRKLSKDEKLALVRAGREDRGKYQAQAAVKQKKTGGSSNQQKEHKKAMPLAAKRAKVAKTRVDKRKKNQRSGK

Query:  QFRGRKAWK
        QFRG+KAWK
Subjt:  QFRGRKAWK

TrEMBL top hitse value%identityAlignment
A0A1S3CDG0 Protein SDA11.8e-6971.77Show/hide
Query:  ETESISDEIVETGSMDAGTSPRNFMLKKRKRSNFDRQLVTCDSSLRALRKLSGKVVGKTLGSTDGILSNEDFQRIKELQAKKAAKDALTQHGLLRNGS--
        ++E++SDEIVETGS++A TS ++   KKRK S+FD+QLVT DSSLRAL++L+   V K+   TDGILSNEDFQRIK+L+AKK AK ALTQHGLLRN S  
Subjt:  ETESISDEIVETGSMDAGTSPRNFMLKKRKRSNFDRQLVTCDSSLRALRKLSGKVVGKTLGSTDGILSNEDFQRIKELQAKKAAKDALTQHGLLRNGS--

Query:  ---AFKISNTEELSTKRVNPAKFEVHIRRKLSKDEKLALVRAGREDRGKYQAQAAVKQKKTGGSSNQQKEHKKAMPLAAKRAKVAKTRVDKRKKNQRSGK
           A K+ NT+ELS KRV+PAK EVHIRR+++K+EKLALV+AGRE+RGKYQA+AAVKQKKTGG SN+QKEHKKAMPLAAKR+KVAK+R+DK+KKNQRSGK
Subjt:  ---AFKISNTEELSTKRVNPAKFEVHIRRKLSKDEKLALVRAGREDRGKYQAQAAVKQKKTGGSSNQQKEHKKAMPLAAKRAKVAKTRVDKRKKNQRSGK

Query:  QFRGRKAWK
        QFRG+KAWK
Subjt:  QFRGRKAWK

A0A5D3D6E9 Protein SDA11.8e-6971.77Show/hide
Query:  ETESISDEIVETGSMDAGTSPRNFMLKKRKRSNFDRQLVTCDSSLRALRKLSGKVVGKTLGSTDGILSNEDFQRIKELQAKKAAKDALTQHGLLRNGS--
        ++E++SDEIVETGS++A TS ++   KKRK S+FD+QLVT DSSLRAL++L+   V K+   TDGILSNEDFQRIK+L+AKK AK ALTQHGLLRN S  
Subjt:  ETESISDEIVETGSMDAGTSPRNFMLKKRKRSNFDRQLVTCDSSLRALRKLSGKVVGKTLGSTDGILSNEDFQRIKELQAKKAAKDALTQHGLLRNGS--

Query:  ---AFKISNTEELSTKRVNPAKFEVHIRRKLSKDEKLALVRAGREDRGKYQAQAAVKQKKTGGSSNQQKEHKKAMPLAAKRAKVAKTRVDKRKKNQRSGK
           A K+ NT+ELS KRV+PAK EVHIRR+++K+EKLALV+AGRE+RGKYQA+AAVKQKKTGG SN+QKEHKKAMPLAAKR+KVAK+R+DK+KKNQRSGK
Subjt:  ---AFKISNTEELSTKRVNPAKFEVHIRRKLSKDEKLALVRAGREDRGKYQAQAAVKQKKTGGSSNQQKEHKKAMPLAAKRAKVAKTRVDKRKKNQRSGK

Query:  QFRGRKAWK
        QFRG+KAWK
Subjt:  QFRGRKAWK

A0A6J1D5Q3 Protein SDA16.6e-7776.89Show/hide
Query:  QQRETESISDEIVETGSMDAGTSPRNFMLKKRKRSNFDRQLVTCDSSLRALRKLSGKVVGKTLGSTDGILSNEDFQRIKELQAKKAAKDALTQHGLLRNG
        ++ + ++ISD++V+TGSMDAGTS R+ ML KRKRS+FD+QLVT DSSLRAL+KL+G V  K   STDGILSNEDF+RIKEL+AKK AK+ALTQHGLLRNG
Subjt:  QQRETESISDEIVETGSMDAGTSPRNFMLKKRKRSNFDRQLVTCDSSLRALRKLSGKVVGKTLGSTDGILSNEDFQRIKELQAKKAAKDALTQHGLLRNG

Query:  S-----AFKISNTEELSTKRVNPAKFEVHIRRKLSKDEKLALVRAGREDRGKYQAQAAVKQKKTGGSSNQQKEHKKAMPLAAKRAKVAKTRVDKRKKNQR
        S     AFKI +T+EL TKRV+P+K EVHIRR+LSK+EKLALV+AGREDRGKYQA+AAVKQKKTGG SNQQKEHKKAMPLAAKRAK+AKTRVDKRKK+QR
Subjt:  S-----AFKISNTEELSTKRVNPAKFEVHIRRKLSKDEKLALVRAGREDRGKYQAQAAVKQKKTGGSSNQQKEHKKAMPLAAKRAKVAKTRVDKRKKNQR

Query:  SGKQFRGRKAWK
        SGKQFRG+KAWK
Subjt:  SGKQFRGRKAWK

A0A6J1GQ82 Protein SDA12.4e-7172.25Show/hide
Query:  ETESISDEIVETGSMDAGTSPRNFMLKKRKRSNFDRQLVTCDSSLRALRKLSGKVVGKTLGSTDGILSNEDFQRIKELQAKKAAKDALTQHGLLRN----
        E++++SDEIVETGS+DA T+ R+  LKKRK S+FD+Q +T +SSLRAL+KL+  V GK+   TDGILSNEDF+RIKEL+AKK AK ALTQHGLLRN    
Subjt:  ETESISDEIVETGSMDAGTSPRNFMLKKRKRSNFDRQLVTCDSSLRALRKLSGKVVGKTLGSTDGILSNEDFQRIKELQAKKAAKDALTQHGLLRN----

Query:  -GSAFKISNTEELSTKRVNPAKFEVHIRRKLSKDEKLALVRAGREDRGKYQAQAAVKQKKTGGSSNQQKEHKKAMPLAAKRAKVAKTRVDKRKKNQRSGK
          +AFK+ +T+ELSTKR++P+K EVHIRR++SK+EKLALV+AGREDRGKYQA+AAVKQKKTGG SN+QKEHKKAMPLAAKR++VAK+RVDKRKK+QRSGK
Subjt:  -GSAFKISNTEELSTKRVNPAKFEVHIRRKLSKDEKLALVRAGREDRGKYQAQAAVKQKKTGGSSNQQKEHKKAMPLAAKRAKVAKTRVDKRKKNQRSGK

Query:  QFRGRKAWK
        QFRG+KAWK
Subjt:  QFRGRKAWK

A0A6J1JM56 Protein SDA11.3e-6971.29Show/hide
Query:  ETESISDEIVETGSMDAGTSPRNFMLKKRKRSNFDRQLVTCDSSLRALRKLSGKVVGKTLGSTDGILSNEDFQRIKELQAKKAAKDALTQHGLLRN----
        E +++SDEIVE GS+DA T+ R+  LKKRK S+FD+Q +T +SSLRAL+KL+  V  K+   TDGILSNEDF+RIKEL+AKK AK ALTQHGLLRN    
Subjt:  ETESISDEIVETGSMDAGTSPRNFMLKKRKRSNFDRQLVTCDSSLRALRKLSGKVVGKTLGSTDGILSNEDFQRIKELQAKKAAKDALTQHGLLRN----

Query:  -GSAFKISNTEELSTKRVNPAKFEVHIRRKLSKDEKLALVRAGREDRGKYQAQAAVKQKKTGGSSNQQKEHKKAMPLAAKRAKVAKTRVDKRKKNQRSGK
          +AFK+ +T+ELSTKR++P+K EVHIRR++SK+EKLALV+AGREDRGKYQA+AAVKQKKTGG SN+QKEHKKAMPLAAKR++VAK+RVDKRKK+QRSGK
Subjt:  -GSAFKISNTEELSTKRVNPAKFEVHIRRKLSKDEKLALVRAGREDRGKYQAQAAVKQKKTGGSSNQQKEHKKAMPLAAKRAKVAKTRVDKRKKNQRSGK

Query:  QFRGRKAWK
        QFRG+KAWK
Subjt:  QFRGRKAWK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G13160.1 ARM repeat superfamily protein7.8e-4652.61Show/hide
Query:  SKAQQRETESISDEIVETGSMDAGTSPRNFMLKKRKRSNFDRQLVTCDSSLRALRKLS-GKVVGKTLGSTDGILSNEDFQRIKELQAKKAAKDALTQHGL
        S+ ++ E+E    E  ++   D+G   +    KKRK  +FD  L++ D+SLRAL++ +  K    +    DGILSNEDF++IK LQAKK AK AL + G 
Subjt:  SKAQQRETESISDEIVETGSMDAGTSPRNFMLKKRKRSNFDRQLVTCDSSLRALRKLS-GKVVGKTLGSTDGILSNEDFQRIKELQAKKAAKDALTQHGL

Query:  LRNGSAFKISNTEELSTKRVNPAKFEVHIRRKLSKDEKLALVRAGREDRGKYQAQAAVKQKKTGGSSNQQKEHKKAMPLAAKRAKVAKTRVDKRKKNQRS
              FK+ N+++LS KRV+PAK E HIR KL+K+++L LV+AGREDRGKY+++AAVKQKKTGGSSN+QKEH+K MPLAA R+K  K++  K+ KN  S
Subjt:  LRNGSAFKISNTEELSTKRVNPAKFEVHIRRKLSKDEKLALVRAGREDRGKYQAQAAVKQKKTGGSSNQQKEHKKAMPLAAKRAKVAKTRVDKRKKNQRS

Query:  GKQFRGRKAWK
        G QFRGRKAWK
Subjt:  GKQFRGRKAWK

AT4G31520.1 SDA1 family protein4.3e-4450Show/hide
Query:  KKKSKAQQRETESISDEIVETGSMDAGTSPRNFMLKKRKRSNFDRQLVTCDSSLRALRKLSGKVVGKT-LGSTDGILSNEDFQRIKELQAKKAAKDALTQ
        ++K+ + + ET+  ++E     S++   +      KKRK  +FD  L+  D+SLRAL++ +     +T     DGILSNEDF++IKE++ KK AK AL +
Subjt:  KKKSKAQQRETESISDEIVETGSMDAGTSPRNFMLKKRKRSNFDRQLVTCDSSLRALRKLSGKVVGKT-LGSTDGILSNEDFQRIKELQAKKAAKDALTQ

Query:  HGLLRNGSAFKISNTEELSTKRVNPAKFEVHIRRKLSKDEKLALVRAGREDRGKYQAQAAVKQKKTGGSSNQQKEHKKAMPLAAKRAKVAKTRVDKRKKN
         GL       K+ ++++LS K VNPAK E HIR+KL K+E+L LV+AGREDRGKY+++ A+KQKKTGGSSN+QKEHKK MPLAA R+K  K +  K+ KN
Subjt:  HGLLRNGSAFKISNTEELSTKRVNPAKFEVHIRRKLSKDEKLALVRAGREDRGKYQAQAAVKQKKTGGSSNQQKEHKKAMPLAAKRAKVAKTRVDKRKKN

Query:  QRSGKQFRGRKAWK
          SG QFRGRKAWK
Subjt:  QRSGKQFRGRKAWK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAGGACGAAGATAGTGATGAAGAAGAAGAGCAAAGCACAACAAAGAGAGACAGAGAGTATCTCAGATGAGATTGTTGAAACTGGTTCAATGGATGCTGGAACTAG
TCCTAGAAATTTTATGCTGAAGAAAAGGAAACGTTCCAATTTTGACCGACAACTTGTTACTTGCGATTCAAGCCTTCGAGCATTGAGGAAATTAAGTGGCAAAGTCGTAG
GAAAAACGTTAGGATCAACTGACGGCATTCTTTCCAATGAAGACTTCCAAAGGATCAAGGAATTACAGGCAAAGAAAGCAGCCAAAGATGCTTTGACTCAACATGGGTTG
CTGAGAAATGGTTCTGCATTTAAGATTTCAAATACTGAAGAATTGAGTACAAAGCGAGTGAATCCTGCCAAGTTCGAGGTTCATATCCGGAGAAAGCTAAGCAAGGATGA
AAAACTAGCATTAGTGAGGGCCGGAAGAGAGGATAGAGGAAAGTACCAAGCACAGGCTGCTGTCAAACAAAAGAAGACGGGAGGTTCAAGCAATCAGCAGAAAGAACACA
AGAAAGCCATGCCTCTAGCTGCGAAGCGAGCTAAAGTAGCAAAAACTCGAGTCGACAAGAGGAAGAAGAATCAACGTTCAGGAAAACAGTTTAGAGGGAGGAAGGCCTGG
AAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGAGGACGAAGATAGTGATGAAGAAGAAGAGCAAAGCACAACAAAGAGAGACAGAGAGTATCTCAGATGAGATTGTTGAAACTGGTTCAATGGATGCTGGAACTAG
TCCTAGAAATTTTATGCTGAAGAAAAGGAAACGTTCCAATTTTGACCGACAACTTGTTACTTGCGATTCAAGCCTTCGAGCATTGAGGAAATTAAGTGGCAAAGTCGTAG
GAAAAACGTTAGGATCAACTGACGGCATTCTTTCCAATGAAGACTTCCAAAGGATCAAGGAATTACAGGCAAAGAAAGCAGCCAAAGATGCTTTGACTCAACATGGGTTG
CTGAGAAATGGTTCTGCATTTAAGATTTCAAATACTGAAGAATTGAGTACAAAGCGAGTGAATCCTGCCAAGTTCGAGGTTCATATCCGGAGAAAGCTAAGCAAGGATGA
AAAACTAGCATTAGTGAGGGCCGGAAGAGAGGATAGAGGAAAGTACCAAGCACAGGCTGCTGTCAAACAAAAGAAGACGGGAGGTTCAAGCAATCAGCAGAAAGAACACA
AGAAAGCCATGCCTCTAGCTGCGAAGCGAGCTAAAGTAGCAAAAACTCGAGTCGACAAGAGGAAGAAGAATCAACGTTCAGGAAAACAGTTTAGAGGGAGGAAGGCCTGG
AAATAA
Protein sequenceShow/hide protein sequence
MRRTKIVMKKKSKAQQRETESISDEIVETGSMDAGTSPRNFMLKKRKRSNFDRQLVTCDSSLRALRKLSGKVVGKTLGSTDGILSNEDFQRIKELQAKKAAKDALTQHGL
LRNGSAFKISNTEELSTKRVNPAKFEVHIRRKLSKDEKLALVRAGREDRGKYQAQAAVKQKKTGGSSNQQKEHKKAMPLAAKRAKVAKTRVDKRKKNQRSGKQFRGRKAW
K