; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg029047 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg029047
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionAminoacyl-tRNA hydrolase
Genome locationscaffold5:14193333..14195783
RNA-Seq ExpressionSpg029047
SyntenySpg029047
Gene Ontology termsGO:0004045 - aminoacyl-tRNA hydrolase activity (molecular function)
InterPro domainsIPR002833 - Peptidyl-tRNA hydrolase, PTH2
IPR023476 - Peptidyl-tRNA hydrolase II domain superfamily
IPR042237 - Putative peptidyl-tRNA hydrolase PTRHD1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585426.1 putative peptidyl-tRNA hydrolase PTRHD1, partial [Cucurbita argyrosperma subsp. sororia]7.9e-8286.7Show/hide
Query:  MASVISASRFTFSIPNSTRLCSRARVWSSSSLDLRSTNRNSNPFSSDSISESTESNSILPLDNDGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH
        MASVISASRFTFSI NS+RLC  ARVW  SS+ LRS N NS  FSS S+SES ES+S+LPLD+ GAKAEE  DVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MASVISASRFTFSIPNSTRLCSRARVWSSSSLDLRSTNRNSNPFSSDSISESTESNSILPLDNDGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLS
        ASVSAIWLNKDDPHTSEYCSP+NIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVS FFKKLKLS
Subjt:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLS

XP_022951520.1 putative peptidyl-tRNA hydrolase PTRHD1 isoform X1 [Cucurbita moschata]4.6e-8286.77Show/hide
Query:  MASVISASRFTFSIPNSTRLCSRARVWSSSSLDLRSTNRNSNPFSSDSISESTESNSILPLDNDGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH
        MASVISASRFTFSI NS RLC  ARVW  SS+ LRS N NS  FSS S+SES ESNS+LPLD+ GAKAEE  DVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MASVISASRFTFSIPNSTRLCSRARVWSSSSLDLRSTNRNSNPFSSDSISESTESNSILPLDNDGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLSK
        ASVSAIWLNKDDPHTSEYCSP+NIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVS FFKKLKL K
Subjt:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLSK

XP_023002512.1 putative peptidyl-tRNA hydrolase PTRHD1 isoform X1 [Cucurbita maxima]2.1e-8286.77Show/hide
Query:  MASVISASRFTFSIPNSTRLCSRARVWSSSSLDLRSTNRNSNPFSSDSISESTESNSILPLDNDGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH
        MASVISASRFTFSI NS RLCS ARVW  SS+ L S N NS  FSS S+SES ESNS+LPLD+ GAKAEE  DVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MASVISASRFTFSIPNSTRLCSRARVWSSSSLDLRSTNRNSNPFSSDSISESTESNSILPLDNDGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLSK
        ASVSAIWLNKDDPHTSEYCSP+NIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVS FFKKLKL K
Subjt:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLSK

XP_023002513.1 putative peptidyl-tRNA hydrolase PTRHD1 isoform X2 [Cucurbita maxima]4.6e-8287.17Show/hide
Query:  MASVISASRFTFSIPNSTRLCSRARVWSSSSLDLRSTNRNSNPFSSDSISESTESNSILPLDNDGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH
        MASVISASRFTFSI NS RLCS ARVW  SS+ L S N NS  FSS S+SES ESNS+LPLD+ GAKAEE  DVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MASVISASRFTFSIPNSTRLCSRARVWSSSSLDLRSTNRNSNPFSSDSISESTESNSILPLDNDGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKL
        ASVSAIWLNKDDPHTSEYCSP+NIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVS FFKKLKL
Subjt:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKL

XP_023546189.1 putative peptidyl-tRNA hydrolase PTRHD1 [Cucurbita pepo subsp. pepo]3.2e-8385.07Show/hide
Query:  VSCATLCEDIMASVISASRFTFSIPNSTRL--CSRARVWSSSSLDLRSTNRNSNPFSSDSISESTESNSILPLDNDGAKAEETVDVLVQYVVLRRDLIDS
        VSCATLCEDIM SVISAS FTFSI  ST+L  CSR+RVW SSSL LRS NRNSN FSS S+SES ESNS  P D DG   E+T DVL+QYVVLRRDLIDS
Subjt:  VSCATLCEDIMASVISASRFTFSIPNSTRL--CSRARVWSSSSLDLRSTNRNSNPFSSDSISESTESNSILPLDNDGAKAEETVDVLVQYVVLRRDLIDS

Query:  WPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLS
        WPLGSVVTQGCHASVSA+WLNKDDPHTSEYCSP NIDSMHKVTLEVKGETQIVNLSEKLKA+SI HKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKL 
Subjt:  WPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLS

Query:  K
        K
Subjt:  K

TrEMBL top hitse value%identityAlignment
A0A6J1GHT5 Aminoacyl-tRNA hydrolase5.0e-8287.17Show/hide
Query:  MASVISASRFTFSIPNSTRLCSRARVWSSSSLDLRSTNRNSNPFSSDSISESTESNSILPLDNDGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH
        MASVISASRFTFSI NS RLC  ARVW  SS+ LRS N NS  FSS S+SES ESNS+LPLD+ GAKAEE  DVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MASVISASRFTFSIPNSTRLCSRARVWSSSSLDLRSTNRNSNPFSSDSISESTESNSILPLDNDGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKL
        ASVSAIWLNKDDPHTSEYCSP+NIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVS FFKKLKL
Subjt:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKL

A0A6J1GJ11 Aminoacyl-tRNA hydrolase2.2e-8286.77Show/hide
Query:  MASVISASRFTFSIPNSTRLCSRARVWSSSSLDLRSTNRNSNPFSSDSISESTESNSILPLDNDGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH
        MASVISASRFTFSI NS RLC  ARVW  SS+ LRS N NS  FSS S+SES ESNS+LPLD+ GAKAEE  DVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MASVISASRFTFSIPNSTRLCSRARVWSSSSLDLRSTNRNSNPFSSDSISESTESNSILPLDNDGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLSK
        ASVSAIWLNKDDPHTSEYCSP+NIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVS FFKKLKL K
Subjt:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLSK

A0A6J1HBR1 Aminoacyl-tRNA hydrolase8.8e-7983.77Show/hide
Query:  MASVISASRFTFSIPNSTRL--CSRARVWSSSSLDLRSTNRNSNPFSSDSISESTESNSILPLDNDGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQG
        M SVISASRFTFSI  ST+L  CSR+RVW SSSL LRS NRNSN FSSDS+SES ESNS  P D+     E+T DVL+QYVVLRRDLIDSWPLGSVVTQG
Subjt:  MASVISASRFTFSIPNSTRL--CSRARVWSSSSLDLRSTNRNSNPFSSDSISESTESNSILPLDNDGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQG

Query:  CHASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLSK
        CHASVSA+WLNKDDPHT EYCSP NIDSMHKVTLEVKGETQIVNLSEKL+ANSI HKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKL K
Subjt:  CHASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLSK

A0A6J1KJQ6 Aminoacyl-tRNA hydrolase1.0e-8286.77Show/hide
Query:  MASVISASRFTFSIPNSTRLCSRARVWSSSSLDLRSTNRNSNPFSSDSISESTESNSILPLDNDGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH
        MASVISASRFTFSI NS RLCS ARVW  SS+ L S N NS  FSS S+SES ESNS+LPLD+ GAKAEE  DVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MASVISASRFTFSIPNSTRLCSRARVWSSSSLDLRSTNRNSNPFSSDSISESTESNSILPLDNDGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLSK
        ASVSAIWLNKDDPHTSEYCSP+NIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVS FFKKLKL K
Subjt:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLSK

A0A6J1KTS0 Aminoacyl-tRNA hydrolase2.2e-8287.17Show/hide
Query:  MASVISASRFTFSIPNSTRLCSRARVWSSSSLDLRSTNRNSNPFSSDSISESTESNSILPLDNDGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH
        MASVISASRFTFSI NS RLCS ARVW  SS+ L S N NS  FSS S+SES ESNS+LPLD+ GAKAEE  DVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MASVISASRFTFSIPNSTRLCSRARVWSSSSLDLRSTNRNSNPFSSDSISESTESNSILPLDNDGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKL
        ASVSAIWLNKDDPHTSEYCSP+NIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKSVVS FFKKLKL
Subjt:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKL

SwissProt top hitse value%identityAlignment
D3Z4S3 Putative peptidyl-tRNA hydrolase PTRHD18.4e-2648.74Show/hide
Query:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLAT
        +LVQY+VLR+DL     SWP G++V Q CHA+ +A+ L++D PHT+ Y     +  M KV LE   ET +  L+E L+  +I H LW+EQPENI TC+A 
Subjt:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLAT

Query:  KPYPKSVVSAFFKKLKLSK
        +PYPK  VS + KK +L K
Subjt:  KPYPKSVVSAFFKKLKLSK

Q3SZ85 Putative peptidyl-tRNA hydrolase PTRHD18.9e-2851.26Show/hide
Query:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLAT
        +LVQY+VLR+DL     SWP G+VV Q CHA+ +A+ L++D PHT+ Y     ++ M KV LE   ET +  L+E L+  +I HKLW+EQPENIPTC+A 
Subjt:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLAT

Query:  KPYPKSVVSAFFKKLKLSK
        +PYPK  VS + KK +L K
Subjt:  KPYPKSVVSAFFKKLKLSK

Q6GMV3 Putative peptidyl-tRNA hydrolase PTRHD14.2e-2547.9Show/hide
Query:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLAT
        VLVQY+VLR+DL     SWP G++V Q CHA+ +A+  ++D PHT+ Y   + +  M KV LE   ET +  L+E L+  +I H LW+EQPENI TC+A 
Subjt:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLAT

Query:  KPYPKSVVSAFFKKLKLSK
        +PYPK  V  + KK +L K
Subjt:  KPYPKSVVSAFFKKLKLSK

Arabidopsis top hitse value%identityAlignment
AT5G10700.1 Peptidyl-tRNA hydrolase II (PTH2) family protein5.3e-5259.79Show/hide
Query:  MASVISASRFTFSIPNSTRLCS----RARVWSSSSLDLRSTNRNSNPFSSDSISEST-ESNSILPLDNDGAKAEETVDVLVQYVVLRRDLIDSWPLGSVV
        MA+ + ++ F F  P  TR  S    R R + S+   +R  +      +S S+S+ T E ++++    D + AE+  DV+VQYVVLRRDLIDSWPLGSVV
Subjt:  MASVISASRFTFSIPNSTRLCS----RARVWSSSSLDLRSTNRNSNPFSSDSISEST-ESNSILPLDNDGAKAEETVDVLVQYVVLRRDLIDSWPLGSVV

Query:  TQGCHASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLSK
        TQGCHASV+AIW  KDDP T +YC P++IDSMHKVTLEVKGETQ++NLSEKLK   I HKLW+EQPENIPTC+ATKPYPKS VS+FFKKLKL K
Subjt:  TQGCHASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGAGGCGAGGCGACCTGGGGTCATTGCGCCCTAAAGGCAGCCAAGGCGAACTCCTTCAACCAGGCGTTCGCCCGGCAGCGCCTTTCGTCGCCTTTCTACGCCTT
TTCCATTTATGATGATCGGAAAGAGGTCGATTTGGTAGCTTGTGGTTTGGAAAGTACCAAAAACTTCCTGGACCGATGGCTTCGCTTGAAATCTCAAAGTTCGGTAATTG
GTAACACGGTTTCATGTGCTACTTTGTGTGAAGATATCATGGCATCTGTAATTTCAGCATCTCGATTCACATTCTCCATTCCCAATTCCACTAGGCTCTGTTCGAGGGCT
AGGGTTTGGTCATCTTCTTCACTCGATCTTCGGTCTACGAATCGAAATTCCAATCCATTTAGCTCAGATTCGATCAGTGAATCCACTGAAAGTAATTCCATTCTTCCATT
GGACAACGACGGAGCGAAGGCGGAGGAGACCGTCGATGTTTTGGTTCAGTACGTGGTGCTCCGGAGAGATTTGATCGATTCGTGGCCGCTCGGAAGTGTCGTAACTCAGG
GGTGCCATGCTTCGGTTTCCGCCATTTGGTTGAACAAAGACGATCCCCACACTTCAGAGTACTGTAGTCCCGAAAATATCGATTCTATGCACAAGGTTACTCTCGAGGTG
AAGGGAGAAACCCAGATCGTTAACTTATCAGAAAAACTTAAAGCAAATTCAATCGTCCATAAACTCTGGATAGAACAACCAGAGAACATTCCAACATGTCTTGCCACAAA
GCCCTACCCCAAATCTGTTGTATCAGCATTTTTTAAAAAGCTGAAACTCTCTAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAGAGGCGAGGCGACCTGGGGTCATTGCGCCCTAAAGGCAGCCAAGGCGAACTCCTTCAACCAGGCGTTCGCCCGGCAGCGCCTTTCGTCGCCTTTCTACGCCTT
TTCCATTTATGATGATCGGAAAGAGGTCGATTTGGTAGCTTGTGGTTTGGAAAGTACCAAAAACTTCCTGGACCGATGGCTTCGCTTGAAATCTCAAAGTTCGGTAATTG
GTAACACGGTTTCATGTGCTACTTTGTGTGAAGATATCATGGCATCTGTAATTTCAGCATCTCGATTCACATTCTCCATTCCCAATTCCACTAGGCTCTGTTCGAGGGCT
AGGGTTTGGTCATCTTCTTCACTCGATCTTCGGTCTACGAATCGAAATTCCAATCCATTTAGCTCAGATTCGATCAGTGAATCCACTGAAAGTAATTCCATTCTTCCATT
GGACAACGACGGAGCGAAGGCGGAGGAGACCGTCGATGTTTTGGTTCAGTACGTGGTGCTCCGGAGAGATTTGATCGATTCGTGGCCGCTCGGAAGTGTCGTAACTCAGG
GGTGCCATGCTTCGGTTTCCGCCATTTGGTTGAACAAAGACGATCCCCACACTTCAGAGTACTGTAGTCCCGAAAATATCGATTCTATGCACAAGGTTACTCTCGAGGTG
AAGGGAGAAACCCAGATCGTTAACTTATCAGAAAAACTTAAAGCAAATTCAATCGTCCATAAACTCTGGATAGAACAACCAGAGAACATTCCAACATGTCTTGCCACAAA
GCCCTACCCCAAATCTGTTGTATCAGCATTTTTTAAAAAGCTGAAACTCTCTAAGTGA
Protein sequenceShow/hide protein sequence
MARGEATWGHCALKAAKANSFNQAFARQRLSSPFYAFSIYDDRKEVDLVACGLESTKNFLDRWLRLKSQSSVIGNTVSCATLCEDIMASVISASRFTFSIPNSTRLCSRA
RVWSSSSLDLRSTNRNSNPFSSDSISESTESNSILPLDNDGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEV
KGETQIVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSVVSAFFKKLKLSK