; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg029080 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg029080
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptioncoiled-coil domain-containing protein SCD2
Genome locationscaffold11:22802460..22810836
RNA-Seq ExpressionSpg029080
SyntenySpg029080
Gene Ontology termsGO:0000911 - cytokinesis by cell plate formation (biological process)
InterPro domainsIPR040321 - Coiled-coil domain-containing protein SCD2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ99280.1 coiled-coil domain-containing protein SCD2 [Cucumis melo var. makuwa]3.3e-2667.24Show/hide
Query:  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILSELKRAATEQLREVKFEAKALH-------------EEVVLK
        VATLGEGVSLEAKLLSRKEAALR+RE ALK A+PTKDSR+EE+A+LRSE+E       L E   AATEQLRE + EAKAL              EEVVLK
Subjt:  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILSELKRAATEQLREVKFEAKALH-------------EEVVLK

Query:  RCWLARYWGLAVQYAV
        RCWLARYWGLAVQY +
Subjt:  RCWLARYWGLAVQYAV

XP_008440082.1 PREDICTED: coiled-coil domain-containing protein SCD2 [Cucumis melo]3.3e-2667.24Show/hide
Query:  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILSELKRAATEQLREVKFEAKALH-------------EEVVLK
        VATLGEGVSLEAKLLSRKEAALR+RE ALK A+PTKDSR+EE+A+LRSE+E       L E   AATEQLRE + EAKAL              EEVVLK
Subjt:  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILSELKRAATEQLREVKFEAKALH-------------EEVVLK

Query:  RCWLARYWGLAVQYAV
        RCWLARYWGLAVQY +
Subjt:  RCWLARYWGLAVQYAV

XP_023001761.1 coiled-coil domain-containing protein SCD2-like isoform X1 [Cucurbita maxima]1.5e-2668.1Show/hide
Query:  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILSELKRAATEQLREVKFEAKALH-------------EEVVLK
        VATLGEGVSLEAKLLSRKEAALR+RE ALK AKPTKDSR+EEIA+LRSE+E       L +   AATEQLRE + EAKAL              EEVVLK
Subjt:  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILSELKRAATEQLREVKFEAKALH-------------EEVVLK

Query:  RCWLARYWGLAVQYAV
        RCWLARYWGLAVQY +
Subjt:  RCWLARYWGLAVQYAV

XP_023001763.1 coiled-coil domain-containing protein SCD2-like isoform X2 [Cucurbita maxima]1.5e-2668.1Show/hide
Query:  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILSELKRAATEQLREVKFEAKALH-------------EEVVLK
        VATLGEGVSLEAKLLSRKEAALR+RE ALK AKPTKDSR+EEIA+LRSE+E       L +   AATEQLRE + EAKAL              EEVVLK
Subjt:  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILSELKRAATEQLREVKFEAKALH-------------EEVVLK

Query:  RCWLARYWGLAVQYAV
        RCWLARYWGLAVQY +
Subjt:  RCWLARYWGLAVQYAV

XP_023519741.1 coiled-coil domain-containing protein SCD2 isoform X2 [Cucurbita pepo subsp. pepo]4.3e-2668.1Show/hide
Query:  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILSELKRAATEQLREVKFEAKALH-------------EEVVLK
        VATLGEGVSLEAKLLSRKEAALR+RE ALK AKPT DSR+EEIA+LRSE+E       L +   AATEQLRE + EAKAL              EEVVLK
Subjt:  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILSELKRAATEQLREVKFEAKALH-------------EEVVLK

Query:  RCWLARYWGLAVQYAV
        RCWLARYWGLAVQY V
Subjt:  RCWLARYWGLAVQYAV

TrEMBL top hitse value%identityAlignment
A0A1S3B094 coiled-coil domain-containing protein SCD21.6e-2667.24Show/hide
Query:  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILSELKRAATEQLREVKFEAKALH-------------EEVVLK
        VATLGEGVSLEAKLLSRKEAALR+RE ALK A+PTKDSR+EE+A+LRSE+E       L E   AATEQLRE + EAKAL              EEVVLK
Subjt:  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILSELKRAATEQLREVKFEAKALH-------------EEVVLK

Query:  RCWLARYWGLAVQYAV
        RCWLARYWGLAVQY +
Subjt:  RCWLARYWGLAVQYAV

A0A5D3BHM3 Coiled-coil domain-containing protein SCD21.6e-2667.24Show/hide
Query:  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILSELKRAATEQLREVKFEAKALH-------------EEVVLK
        VATLGEGVSLEAKLLSRKEAALR+RE ALK A+PTKDSR+EE+A+LRSE+E       L E   AATEQLRE + EAKAL              EEVVLK
Subjt:  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILSELKRAATEQLREVKFEAKALH-------------EEVVLK

Query:  RCWLARYWGLAVQYAV
        RCWLARYWGLAVQY +
Subjt:  RCWLARYWGLAVQYAV

A0A6J1E854 coiled-coil domain-containing protein SCD2-like isoform X32.1e-2668.1Show/hide
Query:  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILSELKRAATEQLREVKFEAKALH-------------EEVVLK
        VATLGEGVSLEAKLLSRKEAALR+RE ALK AKPT DSR+EEIA+LRSE+E       L +   AATEQLRE + EAKAL              EEVVLK
Subjt:  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILSELKRAATEQLREVKFEAKALH-------------EEVVLK

Query:  RCWLARYWGLAVQYAV
        RCWLARYWGLAVQY V
Subjt:  RCWLARYWGLAVQYAV

A0A6J1KJI4 coiled-coil domain-containing protein SCD2-like isoform X17.1e-2768.1Show/hide
Query:  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILSELKRAATEQLREVKFEAKALH-------------EEVVLK
        VATLGEGVSLEAKLLSRKEAALR+RE ALK AKPTKDSR+EEIA+LRSE+E       L +   AATEQLRE + EAKAL              EEVVLK
Subjt:  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILSELKRAATEQLREVKFEAKALH-------------EEVVLK

Query:  RCWLARYWGLAVQYAV
        RCWLARYWGLAVQY +
Subjt:  RCWLARYWGLAVQYAV

A0A6J1KRH4 coiled-coil domain-containing protein SCD2-like isoform X27.1e-2768.1Show/hide
Query:  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILSELKRAATEQLREVKFEAKALH-------------EEVVLK
        VATLGEGVSLEAKLLSRKEAALR+RE ALK AKPTKDSR+EEIA+LRSE+E       L +   AATEQLRE + EAKAL              EEVVLK
Subjt:  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILSELKRAATEQLREVKFEAKALH-------------EEVVLK

Query:  RCWLARYWGLAVQYAV
        RCWLARYWGLAVQY +
Subjt:  RCWLARYWGLAVQYAV

SwissProt top hitse value%identityAlignment
Q8RWD5 Coiled-coil domain-containing protein SCD22.7e-2358.62Show/hide
Query:  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILSELKRAATEQLREVKFEAKALH-------------EEVVLK
        VA+LGEGVSLEAKLLSRKEAALR+RE AL VAK  K  +DEEI SLRSE+E       L +    A E+L+E + EAK+L              EEVVLK
Subjt:  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILSELKRAATEQLREVKFEAKALH-------------EEVVLK

Query:  RCWLARYWGLAVQYAV
        RCWLARYWGLAVQ+ +
Subjt:  RCWLARYWGLAVQYAV

Arabidopsis top hitse value%identityAlignment
AT3G48860.1 unknown protein1.9e-2458.62Show/hide
Query:  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILSELKRAATEQLREVKFEAKALH-------------EEVVLK
        VA+LGEGVSLEAKLLSRKEAALR+RE AL VAK  K  +DEEI SLRSE+E       L +    A E+L+E + EAK+L              EEVVLK
Subjt:  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILSELKRAATEQLREVKFEAKALH-------------EEVVLK

Query:  RCWLARYWGLAVQYAV
        RCWLARYWGLAVQ+ +
Subjt:  RCWLARYWGLAVQYAV

AT3G48860.2 unknown protein1.9e-2458.62Show/hide
Query:  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILSELKRAATEQLREVKFEAKALH-------------EEVVLK
        VA+LGEGVSLEAKLLSRKEAALR+RE AL VAK  K  +DEEI SLRSE+E       L +    A E+L+E + EAK+L              EEVVLK
Subjt:  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILSELKRAATEQLREVKFEAKALH-------------EEVVLK

Query:  RCWLARYWGLAVQYAV
        RCWLARYWGLAVQ+ +
Subjt:  RCWLARYWGLAVQYAV

AT4G25070.1 unknown protein4.6e-1847.41Show/hide
Query:  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILSELKRAATEQLREVKFEAKALH-------------EEVVLK
        VA+LGEG + + KLL RKEAALR+RE AL+ A+  +D R+ E  +L SE +       L +    +TEQL+EV+ E K+L              EEVVLK
Subjt:  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILSELKRAATEQLREVKFEAKALH-------------EEVVLK

Query:  RCWLARYWGLAVQYAV
        RCWLARYW LAVQ+ +
Subjt:  RCWLARYWGLAVQYAV

AT5G13260.1 unknown protein2.7e-1851.82Show/hide
Query:  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEME--MYDVVIILSELKRAATE--QLREVKFE---AKALHEEVVLKRCWLAR
        V +LGEGVSLEAKLLSRKEAALR+RE ALK A+  +D  + E  +LRS++E    +   I+++L+ A +E   LR +       +   EEVVLKRCWLAR
Subjt:  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEME--MYDVVIILSELKRAATE--QLREVKFE---AKALHEEVVLKRCWLAR

Query:  YWGLAVQYAV
        YWGLA +Y +
Subjt:  YWGLAVQYAV

AT5G23700.1 unknown protein2.1e-2356.9Show/hide
Query:  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILSELKRAATEQLREVKFEAKALH-------------EEVVLK
        VA+LGEGVSLEAKLLSRKEAALR+RE ALK A   KD + EE+ SLRSE++      IL +    A E L+E + EAKAL              EEV LK
Subjt:  VATLGEGVSLEAKLLSRKEAALRRREVALKVAKPTKDSRDEEIASLRSEMEMYDVVIILSELKRAATEQLREVKFEAKALH-------------EEVVLK

Query:  RCWLARYWGLAVQYAV
        RCWLARYWGLAVQ+ +
Subjt:  RCWLARYWGLAVQYAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCAGATTCTGCCTCCAGACGCAGCAGCGTCGCGACGCTGTTCATCAAAGCGTCACGACGCTGTCGCGATTTCACGAAGAAGGAGTTCTGCTATCGCATAAGCGTCG
CGACGCTAACGCGATTGCATGTGGCGTGCGACTAGGGTTTCATGAGGCGGCTGAAAGTGGTTTTGCGATTCGGTTCGGCTGGTCTGGGGTCGGTTTGGCCCGGTCCAGCC
CGGTTCAAACTTGTTTTGATGATTTGGAGTCCGGTTCGAATCGGTTGGTGCGGTCTAGTCCGGTTATGAAGCTGCAGAAGGATGGAACTCTCCCGGTTAAGTTCTGTCTA
AGGCTGAAGGTATTTAAGTTGACGGTTTACGGAACACCTGCTACCTGGGAACAGACTCGGAACCTGATAGGAACAGAGGGAGATGATGAAGAAGAGAGTTTACTGACGCC
ATTATCATTTAGTGGGGGAGTGATTATTGCTTGGTACCTTTTCCTATATTGGTCGGATCAAATTAGGGCGTTGGTGAAAATGAGCATCACTTTTAATTGGGGAAGCCCTA
AGAGGAAGCCAATCAACTCCTTGCTGGTTGCTACTCTTGGAGAGGGTGTTTCATTAGAAGCTAAATTATTAAGCAGGAAAGAAGCAGCCTTGCGTCGAAGAGAGGTTGCA
CTCAAGGTTGCAAAACCAACCAAGGATAGTAGAGACGAAGAAATCGCTTCCCTTCGTTCAGAAATGGAGATGTATGATGTTGTAATTATTTTATCAGAACTTAAAAGAGC
AGCTACAGAACAACTCCGAGAAGTAAAGTTTGAAGCAAAGGCTCTTCATGAGGAGGTTGTGTTGAAGAGGTGTTGGCTTGCTCGCTACTGGGGCTTAGCAGTTCAATATG
CTGTGCTTTTGGGATTAATGTGGCAGCCTGTGGGTGTATTTGATAAGGATGATGTGGGCTGCTGTTATTTCTTCAAGATTGATTTGAGTACACGAGGTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCAGATTCTGCCTCCAGACGCAGCAGCGTCGCGACGCTGTTCATCAAAGCGTCACGACGCTGTCGCGATTTCACGAAGAAGGAGTTCTGCTATCGCATAAGCGTCG
CGACGCTAACGCGATTGCATGTGGCGTGCGACTAGGGTTTCATGAGGCGGCTGAAAGTGGTTTTGCGATTCGGTTCGGCTGGTCTGGGGTCGGTTTGGCCCGGTCCAGCC
CGGTTCAAACTTGTTTTGATGATTTGGAGTCCGGTTCGAATCGGTTGGTGCGGTCTAGTCCGGTTATGAAGCTGCAGAAGGATGGAACTCTCCCGGTTAAGTTCTGTCTA
AGGCTGAAGGTATTTAAGTTGACGGTTTACGGAACACCTGCTACCTGGGAACAGACTCGGAACCTGATAGGAACAGAGGGAGATGATGAAGAAGAGAGTTTACTGACGCC
ATTATCATTTAGTGGGGGAGTGATTATTGCTTGGTACCTTTTCCTATATTGGTCGGATCAAATTAGGGCGTTGGTGAAAATGAGCATCACTTTTAATTGGGGAAGCCCTA
AGAGGAAGCCAATCAACTCCTTGCTGGTTGCTACTCTTGGAGAGGGTGTTTCATTAGAAGCTAAATTATTAAGCAGGAAAGAAGCAGCCTTGCGTCGAAGAGAGGTTGCA
CTCAAGGTTGCAAAACCAACCAAGGATAGTAGAGACGAAGAAATCGCTTCCCTTCGTTCAGAAATGGAGATGTATGATGTTGTAATTATTTTATCAGAACTTAAAAGAGC
AGCTACAGAACAACTCCGAGAAGTAAAGTTTGAAGCAAAGGCTCTTCATGAGGAGGTTGTGTTGAAGAGGTGTTGGCTTGCTCGCTACTGGGGCTTAGCAGTTCAATATG
CTGTGCTTTTGGGATTAATGTGGCAGCCTGTGGGTGTATTTGATAAGGATGATGTGGGCTGCTGTTATTTCTTCAAGATTGATTTGAGTACACGAGGTGAATGA
Protein sequenceShow/hide protein sequence
MLRFCLQTQQRRDAVHQSVTTLSRFHEEGVLLSHKRRDANAIACGVRLGFHEAAESGFAIRFGWSGVGLARSSPVQTCFDDLESGSNRLVRSSPVMKLQKDGTLPVKFCL
RLKVFKLTVYGTPATWEQTRNLIGTEGDDEEESLLTPLSFSGGVIIAWYLFLYWSDQIRALVKMSITFNWGSPKRKPINSLLVATLGEGVSLEAKLLSRKEAALRRREVA
LKVAKPTKDSRDEEIASLRSEMEMYDVVIILSELKRAATEQLREVKFEAKALHEEVVLKRCWLARYWGLAVQYAVLLGLMWQPVGVFDKDDVGCCYFFKIDLSTRGE