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Spg029149 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg029149
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionmRNA cap-binding protein
Genome locationscaffold11:24146716..24147517
RNA-Seq ExpressionSpg029149
SyntenySpg029149
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0006417 - regulation of translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581660.1 Eukaryotic translation initiation factor NCBP, partial [Cucurbita argyrosperma subsp. sororia]3.8e-2492.75Show/hide
Query:  MELVAEKKDFDSANDNNKLNSAQAVLDSSYPSSVAADDTGSYNNSKEAEDLSERVARDLKDGLHPLKDK
        MELVAEKKDFDSANDNNKLNSAQAVLDSSYP SVA D+TGS NNSKEAEDLSERVARDLKDGLHPLK K
Subjt:  MELVAEKKDFDSANDNNKLNSAQAVLDSSYPSSVAADDTGSYNNSKEAEDLSERVARDLKDGLHPLKDK

XP_022155968.1 eukaryotic translation initiation factor NCBP [Momordica charantia]1.3e-1976.81Show/hide
Query:  MELVAEKKDFDSANDNNKLNSAQAVLDSSYPSSVAADDTGSYNNSKEAEDLSERVARDLKDGLHPLKDK
        MELV EKK+FD+ANDN +LN+AQ VLDSSYP S+AADD+ ++NN+KE EDLSERVARDLKDGLHPLK K
Subjt:  MELVAEKKDFDSANDNNKLNSAQAVLDSSYPSSVAADDTGSYNNSKEAEDLSERVARDLKDGLHPLKDK

XP_022930593.1 eukaryotic translation initiation factor NCBP [Cucurbita moschata]1.3e-2494.2Show/hide
Query:  MELVAEKKDFDSANDNNKLNSAQAVLDSSYPSSVAADDTGSYNNSKEAEDLSERVARDLKDGLHPLKDK
        MELVAEKKDFDSANDNNKLNSAQAVLDSSYP SVAAD+TGS NNSKEAEDLSERVARDLKDGLHPLK K
Subjt:  MELVAEKKDFDSANDNNKLNSAQAVLDSSYPSSVAADDTGSYNNSKEAEDLSERVARDLKDGLHPLKDK

XP_023526048.1 eukaryotic translation initiation factor NCBP [Cucurbita pepo subsp. pepo]3.8e-2492.75Show/hide
Query:  MELVAEKKDFDSANDNNKLNSAQAVLDSSYPSSVAADDTGSYNNSKEAEDLSERVARDLKDGLHPLKDK
        MELV EKKDFDSANDNNKLNSAQAVLDSSYP SVAAD+TGS NNSKEAEDLSERVARDLKDGLHPLK K
Subjt:  MELVAEKKDFDSANDNNKLNSAQAVLDSSYPSSVAADDTGSYNNSKEAEDLSERVARDLKDGLHPLKDK

XP_038904120.1 eukaryotic translation initiation factor NCBP isoform X2 [Benincasa hispida]3.8e-1676.81Show/hide
Query:  MELVAEKKDFDSANDNNKLNSAQAVLDSSYPSSVAADDTGSYNNSKEAEDLSERVARDLKDGLHPLKDK
        MELV EK+DFDSANDNNKLNSAQ + DSS+P S+ +DDT    N+KEAEDLSERVARDLKDGLHPLK K
Subjt:  MELVAEKKDFDSANDNNKLNSAQAVLDSSYPSSVAADDTGSYNNSKEAEDLSERVARDLKDGLHPLKDK

TrEMBL top hitse value%identityAlignment
A0A0A0LI71 Uncharacterized protein3.8e-1466.23Show/hide
Query:  MELVAEKKDFDSANDNNKLNSAQAVLDSSYPSSVAADDTGSYNNSKEAEDLSERVARDLKDGLHPLKDKEMKISLIE
        ME V E +DFDSANDNNK NSAQ +LDSS+  S+ ADDT    N+KEAE+LSER+ARDLKDGLHPLK +    SL E
Subjt:  MELVAEKKDFDSANDNNKLNSAQAVLDSSYPSSVAADDTGSYNNSKEAEDLSERVARDLKDGLHPLKDKEMKISLIE

A0A5A7UUL0 mRNA cap-binding protein3.8e-1471.01Show/hide
Query:  MELVAEKKDFDSANDNNKLNSAQAVLDSSYPSSVAADDTGSYNNSKEAEDLSERVARDLKDGLHPLKDK
        ME V EK+DFDSANDNNK NSAQ +LDSS+  S+ ADDT    N+KEAE+ SER+ARDLKDGLHPLK K
Subjt:  MELVAEKKDFDSANDNNKLNSAQAVLDSSYPSSVAADDTGSYNNSKEAEDLSERVARDLKDGLHPLKDK

A0A6J1DPB4 mRNA cap-binding protein6.1e-2076.81Show/hide
Query:  MELVAEKKDFDSANDNNKLNSAQAVLDSSYPSSVAADDTGSYNNSKEAEDLSERVARDLKDGLHPLKDK
        MELV EKK+FD+ANDN +LN+AQ VLDSSYP S+AADD+ ++NN+KE EDLSERVARDLKDGLHPLK K
Subjt:  MELVAEKKDFDSANDNNKLNSAQAVLDSSYPSSVAADDTGSYNNSKEAEDLSERVARDLKDGLHPLKDK

A0A6J1EVP3 mRNA cap-binding protein6.3e-2594.2Show/hide
Query:  MELVAEKKDFDSANDNNKLNSAQAVLDSSYPSSVAADDTGSYNNSKEAEDLSERVARDLKDGLHPLKDK
        MELVAEKKDFDSANDNNKLNSAQAVLDSSYP SVAAD+TGS NNSKEAEDLSERVARDLKDGLHPLK K
Subjt:  MELVAEKKDFDSANDNNKLNSAQAVLDSSYPSSVAADDTGSYNNSKEAEDLSERVARDLKDGLHPLKDK

A0A6J1IS20 mRNA cap-binding protein6.3e-2594.2Show/hide
Query:  MELVAEKKDFDSANDNNKLNSAQAVLDSSYPSSVAADDTGSYNNSKEAEDLSERVARDLKDGLHPLKDK
        MELVAEKKDFDSANDNNKLNSAQAVLDSSYP SVAAD+TGS NNSKEAEDLSERVARDLKDGLHPLK K
Subjt:  MELVAEKKDFDSANDNNKLNSAQAVLDSSYPSSVAADDTGSYNNSKEAEDLSERVARDLKDGLHPLKDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTGGTAGCCGAGAAGAAGGATTTTGATTCTGCAAACGACAACAACAAGCTCAACTCTGCTCAAGCAGTTCTCGATTCTTCTTATCCATCCTCAGTCGCTGCTGA
TGACACTGGTAGTTATAACAATTCCAAAGAAGCTGAAGATTTAAGTGAACGCGTAGCTCGAGACCTCAAAGATGGTCTTCATCCCCTAAAGGACAAAGAAATGAAGATTT
CGTTGATTGAAGAATTGAAGAGTATTCTTGTGTCTGTTTTTTGGAACTCAGACGTAGCTGTCCTACCTCATTTTGTATTAAGTCCTGAAGAGGGTTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTGGTAGCCGAGAAGAAGGATTTTGATTCTGCAAACGACAACAACAAGCTCAACTCTGCTCAAGCAGTTCTCGATTCTTCTTATCCATCCTCAGTCGCTGCTGA
TGACACTGGTAGTTATAACAATTCCAAAGAAGCTGAAGATTTAAGTGAACGCGTAGCTCGAGACCTCAAAGATGGTCTTCATCCCCTAAAGGACAAAGAAATGAAGATTT
CGTTGATTGAAGAATTGAAGAGTATTCTTGTGTCTGTTTTTTGGAACTCAGACGTAGCTGTCCTACCTCATTTTGTATTAAGTCCTGAAGAGGGTTATTAA
Protein sequenceShow/hide protein sequence
MELVAEKKDFDSANDNNKLNSAQAVLDSSYPSSVAADDTGSYNNSKEAEDLSERVARDLKDGLHPLKDKEMKISLIEELKSILVSVFWNSDVAVLPHFVLSPEEGY