; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg029218 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg029218
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationscaffold12:33511227..33519128
RNA-Seq ExpressionSpg029218
SyntenySpg029218
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035535.1 hypothetical protein SDJN02_02332 [Cucurbita argyrosperma subsp. argyrosperma]4.4e-3332.66Show/hide
Query:  WLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQWMEEELLDHLPAPTLANSLKLENL
        WLR IQ I NADGGGGSAGLVFSTFARYFSR+RAENLRKINPKLTPQEASLVAQDLYGVVKQHGPL+VSNAWIKAQ                        
Subjt:  WLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQWMEEELLDHLPAPTLANSLKLENL

Query:  KEEAPDRASKTTIPQQMIKIFLCLPIEDATKRANHPGHTLKSFSKKESDSRRNRQSHLASKALLRIFKFPNSRPLRLTVWKVKVPKKIRFFMWQVIHGRV
                                                                                                            
Subjt:  KEEAPDRASKTTIPQQMIKIFLCLPIEDATKRANHPGHTLKSFSKKESDSRRNRQSHLASKALLRIFKFPNSRPLRLTVWKVKVPKKIRFFMWQVIHGRV

Query:  NTYDRLLKRMPSLVGPFCCILCRKAEEDLDHILWSCAFARAAWDRFGQVFGLQGLSFADHREMIEEFLLHLPFRKRARFLWLGGMCALLWNLWGERNNRV
                                                                                                            
Subjt:  NTYDRLLKRMPSLVGPFCCILCRKAEEDLDHILWSCAFARAAWDRFGQVFGLQGLSFADHREMIEEFLLHLPFRKRARFLWLGGMCALLWNLWGERNNRV

Query:  FRGSERDPEDVWSLTRYHESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLSTPDDPQADQLKNSSELGVQRQKRQKPP-RRRKPSK
                          ESGV GLNSKTHMKLLLKWMRGRKML+LFC QVGSNKKFLL+TP+DP+ ++LK++SE  VQR+K+QK   RRRK SK
Subjt:  FRGSERDPEDVWSLTRYHESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLSTPDDPQADQLKNSSELGVQRQKRQKPP-RRRKPSK

XP_004145885.1 uncharacterized protein LOC101211684 [Cucumis sativus]1.4e-3432.83Show/hide
Query:  MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQWMEEELLDHLPAPTLANSLKLEN
        MW RSIQRIGNADGGGG AGLVF+TFAR+FSR RAENLRKINPKLTPQEASLVAQDLYGVV+QHGPL++SNAWIKAQ                       
Subjt:  MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQWMEEELLDHLPAPTLANSLKLEN

Query:  LKEEAPDRASKTTIPQQMIKIFLCLPIEDATKRANHPGHTLKSFSKKESDSRRNRQSHLASKALLRIFKFPNSRPLRLTVWKVKVPKKIRFFMWQVIHGR
                                                                                                            
Subjt:  LKEEAPDRASKTTIPQQMIKIFLCLPIEDATKRANHPGHTLKSFSKKESDSRRNRQSHLASKALLRIFKFPNSRPLRLTVWKVKVPKKIRFFMWQVIHGR

Query:  VNTYDRLLKRMPSLVGPFCCILCRKAEEDLDHILWSCAFARAAWDRFGQVFGLQGLSFADHREMIEEFLLHLPFRKRARFLWLGGMCALLWNLWGERNNR
                                                                                                            
Subjt:  VNTYDRLLKRMPSLVGPFCCILCRKAEEDLDHILWSCAFARAAWDRFGQVFGLQGLSFADHREMIEEFLLHLPFRKRARFLWLGGMCALLWNLWGERNNR

Query:  VFRGSERDPEDVWSLTRYHESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLSTPDDPQADQLKNSSELGVQRQKRQK-PPRRRKPSK
                           ESGV+GLNSKTHMKLLLKWMRGRKML LFC  VGSNKKFLL TPDDP+A++LKNSSE G QR+KR K P +RRK SK
Subjt:  VFRGSERDPEDVWSLTRYHESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLSTPDDPQADQLKNSSELGVQRQKRQK-PPRRRKPSK

XP_022159821.1 uncharacterized protein LOC111026127 [Momordica charantia]1.1e-3935.52Show/hide
Query:  MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQWMEEELLDHLPAPTLANSLKLEN
        MWLR  QRIG+ADGGGGSAGLVFSTFARYFSR RAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLS+SNAWIKAQ                       
Subjt:  MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQWMEEELLDHLPAPTLANSLKLEN

Query:  LKEEAPDRASKTTIPQQMIKIFLCLPIEDATKRANHPGHTLKSFSKKESDSRRNRQSHLASKALLRIFKFPNSRPLRLTVWKVKVPKKIRFFMWQVIHGR
                                                                                                            
Subjt:  LKEEAPDRASKTTIPQQMIKIFLCLPIEDATKRANHPGHTLKSFSKKESDSRRNRQSHLASKALLRIFKFPNSRPLRLTVWKVKVPKKIRFFMWQVIHGR

Query:  VNTYDRLLKRMPSLVGPFCCILCRKAEEDLDHILWSCAFARAAWDRFGQVFGLQGLSFADHREMIEEFLLHLPFRKRARFLWLGGMCALLWNLWGERNNR
                                                                                                            
Subjt:  VNTYDRLLKRMPSLVGPFCCILCRKAEEDLDHILWSCAFARAAWDRFGQVFGLQGLSFADHREMIEEFLLHLPFRKRARFLWLGGMCALLWNLWGERNNR

Query:  VFRGSERDPEDVWSLTRYHESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLST-PDDPQADQLKNSSELGVQRQKRQKPP-RRRKPSK
                           E GVSGLNSKTHMKL+LKWMRGRKMLKL C QVGSNKKFLLST PDDPQADQLK+SSELGVQR+KR KPP RRRKPSK
Subjt:  VFRGSERDPEDVWSLTRYHESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLST-PDDPQADQLKNSSELGVQRQKRQKPP-RRRKPSK

XP_022958708.1 uncharacterized protein LOC111459852 [Cucurbita moschata]1.2e-3332.91Show/hide
Query:  WLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQWMEEELLDHLPAPTLANSLKLENL
        WLR IQ I NADGGGGSAGLVFSTF RYFSR+RAENLRKINPKLTPQEASLVAQDLYGVVKQHGPL+VSNAWIKAQ                        
Subjt:  WLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQWMEEELLDHLPAPTLANSLKLENL

Query:  KEEAPDRASKTTIPQQMIKIFLCLPIEDATKRANHPGHTLKSFSKKESDSRRNRQSHLASKALLRIFKFPNSRPLRLTVWKVKVPKKIRFFMWQVIHGRV
                                                                                                            
Subjt:  KEEAPDRASKTTIPQQMIKIFLCLPIEDATKRANHPGHTLKSFSKKESDSRRNRQSHLASKALLRIFKFPNSRPLRLTVWKVKVPKKIRFFMWQVIHGRV

Query:  NTYDRLLKRMPSLVGPFCCILCRKAEEDLDHILWSCAFARAAWDRFGQVFGLQGLSFADHREMIEEFLLHLPFRKRARFLWLGGMCALLWNLWGERNNRV
                                                                                                            
Subjt:  NTYDRLLKRMPSLVGPFCCILCRKAEEDLDHILWSCAFARAAWDRFGQVFGLQGLSFADHREMIEEFLLHLPFRKRARFLWLGGMCALLWNLWGERNNRV

Query:  FRGSERDPEDVWSLTRYHESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLSTPDDPQADQLKNSSELGVQRQKRQKPP-RRRKPSK
                          ESGV GLNSKTHMKLLLKWMRGRKML+LFC QVGSNKKFLL+TPDDP+A++LK++SE  VQR+K+QK   RRRK SK
Subjt:  FRGSERDPEDVWSLTRYHESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLSTPDDPQADQLKNSSELGVQRQKRQKPP-RRRKPSK

XP_038876162.1 uncharacterized protein LOC120068455 [Benincasa hispida]1.6e-3834.85Show/hide
Query:  MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQWMEEELLDHLPAPTLANSLKLEN
        MWLRSIQRIGNADGGGGSAGLVFSTFARYFSR RAENLRKINPKLTPQEASLVAQDLYGVVKQHGPL+VSNAWIKAQ                       
Subjt:  MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQWMEEELLDHLPAPTLANSLKLEN

Query:  LKEEAPDRASKTTIPQQMIKIFLCLPIEDATKRANHPGHTLKSFSKKESDSRRNRQSHLASKALLRIFKFPNSRPLRLTVWKVKVPKKIRFFMWQVIHGR
                                                                                                            
Subjt:  LKEEAPDRASKTTIPQQMIKIFLCLPIEDATKRANHPGHTLKSFSKKESDSRRNRQSHLASKALLRIFKFPNSRPLRLTVWKVKVPKKIRFFMWQVIHGR

Query:  VNTYDRLLKRMPSLVGPFCCILCRKAEEDLDHILWSCAFARAAWDRFGQVFGLQGLSFADHREMIEEFLLHLPFRKRARFLWLGGMCALLWNLWGERNNR
                                                                                                            
Subjt:  VNTYDRLLKRMPSLVGPFCCILCRKAEEDLDHILWSCAFARAAWDRFGQVFGLQGLSFADHREMIEEFLLHLPFRKRARFLWLGGMCALLWNLWGERNNR

Query:  VFRGSERDPEDVWSLTRYHESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLSTPDDPQADQLKNSSELGVQRQKRQKPP-RRRKPSK
                           ESGV+GLNSKTHMKLLLKWMRGRKML LFC QVGSNKKFLL TPDDP+A+QLK+SSE GVQR+KR K P +RRK SK
Subjt:  VFRGSERDPEDVWSLTRYHESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLSTPDDPQADQLKNSSELGVQRQKRQKPP-RRRKPSK

TrEMBL top hitse value%identityAlignment
A0A0A0KK52 Uncharacterized protein6.6e-3532.83Show/hide
Query:  MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQWMEEELLDHLPAPTLANSLKLEN
        MW RSIQRIGNADGGGG AGLVF+TFAR+FSR RAENLRKINPKLTPQEASLVAQDLYGVV+QHGPL++SNAWIKAQ                       
Subjt:  MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQWMEEELLDHLPAPTLANSLKLEN

Query:  LKEEAPDRASKTTIPQQMIKIFLCLPIEDATKRANHPGHTLKSFSKKESDSRRNRQSHLASKALLRIFKFPNSRPLRLTVWKVKVPKKIRFFMWQVIHGR
                                                                                                            
Subjt:  LKEEAPDRASKTTIPQQMIKIFLCLPIEDATKRANHPGHTLKSFSKKESDSRRNRQSHLASKALLRIFKFPNSRPLRLTVWKVKVPKKIRFFMWQVIHGR

Query:  VNTYDRLLKRMPSLVGPFCCILCRKAEEDLDHILWSCAFARAAWDRFGQVFGLQGLSFADHREMIEEFLLHLPFRKRARFLWLGGMCALLWNLWGERNNR
                                                                                                            
Subjt:  VNTYDRLLKRMPSLVGPFCCILCRKAEEDLDHILWSCAFARAAWDRFGQVFGLQGLSFADHREMIEEFLLHLPFRKRARFLWLGGMCALLWNLWGERNNR

Query:  VFRGSERDPEDVWSLTRYHESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLSTPDDPQADQLKNSSELGVQRQKRQK-PPRRRKPSK
                           ESGV+GLNSKTHMKLLLKWMRGRKML LFC  VGSNKKFLL TPDDP+A++LKNSSE G QR+KR K P +RRK SK
Subjt:  VFRGSERDPEDVWSLTRYHESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLSTPDDPQADQLKNSSELGVQRQKRQK-PPRRRKPSK

A0A1S3ATS9 uncharacterized protein LOC1034828881.1e-3231.82Show/hide
Query:  MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQWMEEELLDHLPAPTLANSLKLEN
        MW RSIQRIGN DGGGG  GLVF+TFAR+FSR RAENLRKINPKLTPQEASLVAQDLYGV++QHGPL+VSNAWIKAQ                       
Subjt:  MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQWMEEELLDHLPAPTLANSLKLEN

Query:  LKEEAPDRASKTTIPQQMIKIFLCLPIEDATKRANHPGHTLKSFSKKESDSRRNRQSHLASKALLRIFKFPNSRPLRLTVWKVKVPKKIRFFMWQVIHGR
                                                                                                            
Subjt:  LKEEAPDRASKTTIPQQMIKIFLCLPIEDATKRANHPGHTLKSFSKKESDSRRNRQSHLASKALLRIFKFPNSRPLRLTVWKVKVPKKIRFFMWQVIHGR

Query:  VNTYDRLLKRMPSLVGPFCCILCRKAEEDLDHILWSCAFARAAWDRFGQVFGLQGLSFADHREMIEEFLLHLPFRKRARFLWLGGMCALLWNLWGERNNR
                                                                                                            
Subjt:  VNTYDRLLKRMPSLVGPFCCILCRKAEEDLDHILWSCAFARAAWDRFGQVFGLQGLSFADHREMIEEFLLHLPFRKRARFLWLGGMCALLWNLWGERNNR

Query:  VFRGSERDPEDVWSLTRYHESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLSTPDDPQADQLKNSSELGVQRQKRQK-PPRRRKPSK
                           ESGV+GLNSKTHMKLLLKWMRGR+ML LFC  VGSNKKFLL TPDDP+A++LKN SE G QR+KR K P +RRK SK
Subjt:  VFRGSERDPEDVWSLTRYHESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLSTPDDPQADQLKNSSELGVQRQKRQK-PPRRRKPSK

A0A6J1E538 uncharacterized protein LOC1110261275.2e-4035.52Show/hide
Query:  MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQWMEEELLDHLPAPTLANSLKLEN
        MWLR  QRIG+ADGGGGSAGLVFSTFARYFSR RAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLS+SNAWIKAQ                       
Subjt:  MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQWMEEELLDHLPAPTLANSLKLEN

Query:  LKEEAPDRASKTTIPQQMIKIFLCLPIEDATKRANHPGHTLKSFSKKESDSRRNRQSHLASKALLRIFKFPNSRPLRLTVWKVKVPKKIRFFMWQVIHGR
                                                                                                            
Subjt:  LKEEAPDRASKTTIPQQMIKIFLCLPIEDATKRANHPGHTLKSFSKKESDSRRNRQSHLASKALLRIFKFPNSRPLRLTVWKVKVPKKIRFFMWQVIHGR

Query:  VNTYDRLLKRMPSLVGPFCCILCRKAEEDLDHILWSCAFARAAWDRFGQVFGLQGLSFADHREMIEEFLLHLPFRKRARFLWLGGMCALLWNLWGERNNR
                                                                                                            
Subjt:  VNTYDRLLKRMPSLVGPFCCILCRKAEEDLDHILWSCAFARAAWDRFGQVFGLQGLSFADHREMIEEFLLHLPFRKRARFLWLGGMCALLWNLWGERNNR

Query:  VFRGSERDPEDVWSLTRYHESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLST-PDDPQADQLKNSSELGVQRQKRQKPP-RRRKPSK
                           E GVSGLNSKTHMKL+LKWMRGRKMLKL C QVGSNKKFLLST PDDPQADQLK+SSELGVQR+KR KPP RRRKPSK
Subjt:  VFRGSERDPEDVWSLTRYHESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLST-PDDPQADQLKNSSELGVQRQKRQKPP-RRRKPSK

A0A6J1H3U5 uncharacterized protein LOC1114598525.6e-3432.91Show/hide
Query:  WLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQWMEEELLDHLPAPTLANSLKLENL
        WLR IQ I NADGGGGSAGLVFSTF RYFSR+RAENLRKINPKLTPQEASLVAQDLYGVVKQHGPL+VSNAWIKAQ                        
Subjt:  WLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQWMEEELLDHLPAPTLANSLKLENL

Query:  KEEAPDRASKTTIPQQMIKIFLCLPIEDATKRANHPGHTLKSFSKKESDSRRNRQSHLASKALLRIFKFPNSRPLRLTVWKVKVPKKIRFFMWQVIHGRV
                                                                                                            
Subjt:  KEEAPDRASKTTIPQQMIKIFLCLPIEDATKRANHPGHTLKSFSKKESDSRRNRQSHLASKALLRIFKFPNSRPLRLTVWKVKVPKKIRFFMWQVIHGRV

Query:  NTYDRLLKRMPSLVGPFCCILCRKAEEDLDHILWSCAFARAAWDRFGQVFGLQGLSFADHREMIEEFLLHLPFRKRARFLWLGGMCALLWNLWGERNNRV
                                                                                                            
Subjt:  NTYDRLLKRMPSLVGPFCCILCRKAEEDLDHILWSCAFARAAWDRFGQVFGLQGLSFADHREMIEEFLLHLPFRKRARFLWLGGMCALLWNLWGERNNRV

Query:  FRGSERDPEDVWSLTRYHESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLSTPDDPQADQLKNSSELGVQRQKRQKPP-RRRKPSK
                          ESGV GLNSKTHMKLLLKWMRGRKML+LFC QVGSNKKFLL+TPDDP+A++LK++SE  VQR+K+QK   RRRK SK
Subjt:  FRGSERDPEDVWSLTRYHESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLSTPDDPQADQLKNSSELGVQRQKRQKPP-RRRKPSK

A0A6J1K817 uncharacterized protein LOC1114914952.1e-3332.66Show/hide
Query:  WLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQWMEEELLDHLPAPTLANSLKLENL
        WLR IQ I NADGGGGSAGLVFSTFARYFSR+RAENLRKINPKLTPQEASLVAQDLYGVVKQHGPL+VSNAWIKAQ                        
Subjt:  WLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQWMEEELLDHLPAPTLANSLKLENL

Query:  KEEAPDRASKTTIPQQMIKIFLCLPIEDATKRANHPGHTLKSFSKKESDSRRNRQSHLASKALLRIFKFPNSRPLRLTVWKVKVPKKIRFFMWQVIHGRV
                                                                                                            
Subjt:  KEEAPDRASKTTIPQQMIKIFLCLPIEDATKRANHPGHTLKSFSKKESDSRRNRQSHLASKALLRIFKFPNSRPLRLTVWKVKVPKKIRFFMWQVIHGRV

Query:  NTYDRLLKRMPSLVGPFCCILCRKAEEDLDHILWSCAFARAAWDRFGQVFGLQGLSFADHREMIEEFLLHLPFRKRARFLWLGGMCALLWNLWGERNNRV
                                                                                                            
Subjt:  NTYDRLLKRMPSLVGPFCCILCRKAEEDLDHILWSCAFARAAWDRFGQVFGLQGLSFADHREMIEEFLLHLPFRKRARFLWLGGMCALLWNLWGERNNRV

Query:  FRGSERDPEDVWSLTRYHESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLSTPDDPQADQLKNSSELGVQRQKRQKPP-RRRKPSK
                          ESGV GLNSKTHMKLLLKWMRGRKML+LFC QVGSNKKFLL+TP+DP+A++LK++SE  VQR+K+QK   RR+K SK
Subjt:  FRGSERDPEDVWSLTRYHESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLSTPDDPQADQLKNSSELGVQRQKRQKPP-RRRKPSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G73940.1 unknown protein4.9e-1459.15Show/hide
Query:  RYHESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLST-PDDPQADQLKNSSELGVQRQKRQK
        R  E+GVSGLNSKTHMKLLLKWMRG+KMLKL C QVGS+KKF  +  P+DP  +Q     E   Q  K+++
Subjt:  RYHESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLST-PDDPQADQLKNSSELGVQRQKRQK

AT1G73940.1 unknown protein5.0e-1147.44Show/hide
Query:  ADGGGG-----SAGLVF-------STFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQ
        A GGGG      A  +F       S   RY SR RA N+RKINPK+  QEA  ++  LY + K HGPLSV N W++AQ
Subjt:  ADGGGG-----SAGLVF-------STFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQ

AT2G02650.1 Ribonuclease H-like superfamily protein2.1e-0926.21Show/hide
Query:  PNSRPLRLTVWKVKVPKKIRFFMWQVIHGRVNTYDRLLKRMPSLVGPFCCILCRKAEEDLDHILWSCAFARAAWDRFGQVFGLQ---GLSFADHREMIEE
        P S  ++  +WK+ V  KI+ F+W+ + G + T  RL  R  ++     C  C   EE + HI+++C + ++ W     + G Q     SF D+   + +
Subjt:  PNSRPLRLTVWKVKVPKKIRFFMWQVIHGRVNTYDRLLKRMPSLVGPFCCILCRKAEEDLDHILWSCAFARAAWDRFGQVFGLQ---GLSFADHREMIEE

Query:  FLLHLPFRKRARFL--WLGGMCALLWNLWGERNNRVFRGSERDPE
                   RFL  W      ++W LW  RN  +F+   + P+
Subjt:  FLLHLPFRKRARFL--WLGGMCALLWNLWGERNNRVFRGSERDPE

AT3G25270.1 Ribonuclease H-like superfamily protein5.2e-0825.9Show/hide
Query:  PNSRPLRLTVWKVKVPKKIRFFMWQVIHGRVNTYDRLLKRMPSLVGPFCCILCRKAEEDLDHILWSCAFARAAWDRFG---QVFGLQGLSFADHREMIEE
        P    ++  +WK+K   KI+ F+W+++ G + T D L +R   +     C  C + +E   H+ + C +A+  W   G   Q     G++     E++  
Subjt:  PNSRPLRLTVWKVKVPKKIRFFMWQVIHGRVNTYDRLLKRMPSLVGPFCCILCRKAEEDLDHILWSCAFARAAWDRFG---QVFGLQGLSFADHREMIEE

Query:  FLLHLPFRKRARF---LWLGGMCALLWNLWGERNNRVFR
            L  R+   F   +W      +LW LW  RN  VF+
Subjt:  FLLHLPFRKRARF---LWLGGMCALLWNLWGERNNRVFR

AT4G29090.1 Ribonuclease H-like superfamily protein7.3e-1029.73Show/hide
Query:  PNSRPLRLTVWKVKVPKKIRFFMWQVIHGRVNTYDRLLKRMPSLVGPFCCILCRKAEEDLDHILWSCAFARAAWDRFGQVFGLQGLSFADHREMIEEFLL
        P+  P+   +WK +   KI+ F+W+ +   +     L  R   L     CI C   +E ++H+L+ C FAR  W        L G  +AD   +   ++ 
Subjt:  PNSRPLRLTVWKVKVPKKIRFFMWQVIHGRVNTYDRLLKRMPSLVGPFCCILCRKAEEDLDHILWSCAFARAAWDRFGQVFGLQGLSFADHREMIEEFLL

Query:  HL----PFRKRARFL--WLGGMCALLWNLWGERNNRVFRGSERDPEDV
        +L    P  ++A  L  W      LLW LW  RN  VFRG E + ++V
Subjt:  HL----PFRKRARFL--WLGGMCALLWNLWGERNNRVFRGSERDPEDV

AT5G49410.1 unknown protein8.9e-0854.35Show/hide
Query:  RYHESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLST
        R  E G+ GL SK HMK++L+WMR R+ LKL C  VG +K+FL +T
Subjt:  RYHESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGCTTCGCAGTATCCAAAGAATTGGAAATGCTGATGGAGGTGGAGGTTCTGCTGGCCTTGTTTTCAGCACATTTGCGAGATATTTCTCGAGGACGCGAGCA
GAGAATCTTAGGAAGATCAATCCCAAGTTGACGCCTCAGGAAGCTTCTTTGGTTGCTCAAGATCTCTATGGTGTCGTCAAGCAGCACGGTCCTCTCAGCGTTTCT
AATGCTTGGATTAAAGCCCAGTGGATGGAGGAGGAACTCCTCGATCATCTCCCTGCTCCTACGCTGGCCAATAGTCTGAAACTCGAAAACCTCAAAGAAGAAGCT
CCAGACAGAGCGAGCAAAACAACAATCCCACAACAAATGATCAAGATCTTCCTCTGCCTTCCGATAGAGGATGCAACAAAAAGGGCCAACCACCCGGGGCACACT
CTCAAAAGCTTCTCAAAAAAAGAATCGGATTCAAGGCGAAATCGCCAAAGCCATTTAGCAAGCAAGGCTCTGTTACGAATTTTCAAGTTTCCCAACTCTAGACCC
CTTAGACTCACAGTGTGGAAGGTTAAAGTCCCGAAGAAGATTAGGTTTTTTATGTGGCAAGTTATCCATGGCAGGGTTAATACCTACGATCGTCTGTTGAAAAGG
ATGCCCTCTTTGGTTGGTCCGTTTTGCTGTATTCTGTGTCGGAAGGCGGAGGAAGATCTGGATCATATTCTGTGGAGTTGTGCCTTTGCGCGTGCTGCGTGGGAT
CGGTTTGGTCAGGTTTTTGGGTTGCAAGGGTTATCTTTTGCTGACCACAGGGAGATGATTGAGGAGTTCCTCCTCCATCTGCCATTTCGGAAGAGAGCGAGATTT
TTGTGGCTCGGGGGGATGTGTGCTTTATTGTGGAATCTTTGGGGTGAGAGGAACAATAGAGTGTTTAGGGGGAGTGAGAGGGATCCTGAGGATGTCTGGTCCCTC
ACTCGTTATCATGAATCTGGCGTGAGTGGATTGAACAGCAAAACACACATGAAACTATTGCTGAAATGGATGAGAGGAAGGAAGATGCTGAAGCTTTTCTGCACC
CAAGTTGGTTCCAACAAGAAATTTCTGCTTTCTACTCCCGATGATCCTCAGGCAGATCAGTTGAAGAATTCTTCAGAATTAGGAGTCCAGAGACAGAAGAGACAG
AAGCCACCAAGGAGAAGAAAGCCATCAAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTGGCTTCGCAGTATCCAAAGAATTGGAAATGCTGATGGAGGTGGAGGTTCTGCTGGCCTTGTTTTCAGCACATTTGCGAGATATTTCTCGAGGACGCGAGCA
GAGAATCTTAGGAAGATCAATCCCAAGTTGACGCCTCAGGAAGCTTCTTTGGTTGCTCAAGATCTCTATGGTGTCGTCAAGCAGCACGGTCCTCTCAGCGTTTCT
AATGCTTGGATTAAAGCCCAGTGGATGGAGGAGGAACTCCTCGATCATCTCCCTGCTCCTACGCTGGCCAATAGTCTGAAACTCGAAAACCTCAAAGAAGAAGCT
CCAGACAGAGCGAGCAAAACAACAATCCCACAACAAATGATCAAGATCTTCCTCTGCCTTCCGATAGAGGATGCAACAAAAAGGGCCAACCACCCGGGGCACACT
CTCAAAAGCTTCTCAAAAAAAGAATCGGATTCAAGGCGAAATCGCCAAAGCCATTTAGCAAGCAAGGCTCTGTTACGAATTTTCAAGTTTCCCAACTCTAGACCC
CTTAGACTCACAGTGTGGAAGGTTAAAGTCCCGAAGAAGATTAGGTTTTTTATGTGGCAAGTTATCCATGGCAGGGTTAATACCTACGATCGTCTGTTGAAAAGG
ATGCCCTCTTTGGTTGGTCCGTTTTGCTGTATTCTGTGTCGGAAGGCGGAGGAAGATCTGGATCATATTCTGTGGAGTTGTGCCTTTGCGCGTGCTGCGTGGGAT
CGGTTTGGTCAGGTTTTTGGGTTGCAAGGGTTATCTTTTGCTGACCACAGGGAGATGATTGAGGAGTTCCTCCTCCATCTGCCATTTCGGAAGAGAGCGAGATTT
TTGTGGCTCGGGGGGATGTGTGCTTTATTGTGGAATCTTTGGGGTGAGAGGAACAATAGAGTGTTTAGGGGGAGTGAGAGGGATCCTGAGGATGTCTGGTCCCTC
ACTCGTTATCATGAATCTGGCGTGAGTGGATTGAACAGCAAAACACACATGAAACTATTGCTGAAATGGATGAGAGGAAGGAAGATGCTGAAGCTTTTCTGCACC
CAAGTTGGTTCCAACAAGAAATTTCTGCTTTCTACTCCCGATGATCCTCAGGCAGATCAGTTGAAGAATTCTTCAGAATTAGGAGTCCAGAGACAGAAGAGACAG
AAGCCACCAAGGAGAAGAAAGCCATCAAAATAG
Protein sequenceShow/hide protein sequence
MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRTRAENLRKINPKLTPQEASLVAQDLYGVVKQHGPLSVSNAWIKAQWMEEELLDHLPAPTLANSLKLENLKEEA
PDRASKTTIPQQMIKIFLCLPIEDATKRANHPGHTLKSFSKKESDSRRNRQSHLASKALLRIFKFPNSRPLRLTVWKVKVPKKIRFFMWQVIHGRVNTYDRLLKR
MPSLVGPFCCILCRKAEEDLDHILWSCAFARAAWDRFGQVFGLQGLSFADHREMIEEFLLHLPFRKRARFLWLGGMCALLWNLWGERNNRVFRGSERDPEDVWSL
TRYHESGVSGLNSKTHMKLLLKWMRGRKMLKLFCTQVGSNKKFLLSTPDDPQADQLKNSSELGVQRQKRQKPPRRRKPSK