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Spg029231 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg029231
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionglycine-rich cell wall structural protein 1-like
Genome locationscaffold12:35827183..35828156
RNA-Seq ExpressionSpg029231
SyntenySpg029231
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042689.1 uncharacterized protein E6C27_scaffold44G001870 [Cucumis melo var. makuwa]2.1e-0650Show/hide
Query:  MASMQCSKPAEKS---QQQKHDQHQQDHCF-GHMSDKIKGVF-RGHHHGHGQPPAA----NANCGQCK--PGPKKSEHHKNKEG
        MA  QC+KPA+ +    QQKHDQ    HCF GH+SDKIKGVF +GHHH    P +     +AN   CK     KK EH   KEG
Subjt:  MASMQCSKPAEKS---QQQKHDQHQQDHCF-GHMSDKIKGVF-RGHHHGHGQPPAA----NANCGQCK--PGPKKSEHHKNKEG

XP_008437383.1 PREDICTED: uncharacterized protein LOC103482815 [Cucumis melo]2.6e-1754.31Show/hide
Query:  MASMQCSKPAEKS---QQQKHDQHQQDHCF-GHMSDKIKGVF-RGHHHGHGQPPAA----NANCGQCK--PGPKKSEHHKNKEGGFLNKIKDAFSDH-SD
        MA  QC+KPA+ +    QQKHDQ    HCF GH+SDKIKGVF +GHHH    P +     +AN   CK     KK EH   KEGG L+KIK+AFSDH SD
Subjt:  MASMQCSKPAEKS---QQQKHDQHQQDHCF-GHMSDKIKGVF-RGHHHGHGQPPAA----NANCGQCK--PGPKKSEHHKNKEGGFLNKIKDAFSDH-SD

Query:  SSDSDDDGHKAHHKRK
        SSDS+++ HK HH +K
Subjt:  SSDSDDDGHKAHHKRK

XP_022146004.1 uncharacterized protein LOC111015315 [Momordica charantia]1.3e-2161.74Show/hide
Query:  MASMQCSKPAEK--SQQQKHDQHQQDHCFGHMSDKIKGVFRGHHHGHGQPPAA--------NANCGQCKPGPKKSEHHKNKEGGFLNKIKDAFSDH-SDS
        MAS+QCSKPA++  SQ QKHD   Q HCFGH+SDKIKGVF+GH H HGQ P A        NAN        K+ E HKNK+G  L+KIKDAFSDH SDS
Subjt:  MASMQCSKPAEK--SQQQKHDQHQQDHCFGHMSDKIKGVFRGHHHGHGQPPAA--------NANCGQCKPGPKKSEHHKNKEGGFLNKIKDAFSDH-SDS

Query:  SDSDDDGHKAHHKRK
        SDSD++GHKAH K K
Subjt:  SDSDDDGHKAHHKRK

XP_022958513.1 glycine-rich cell wall structural protein 1-like [Cucurbita moschata]4.5e-0948.96Show/hide
Query:  HCFGHMSDKIKGVFRGHHH--------GHGQPPAANANCGQCKP-----------GPKKSEHHKNKEGGFLNKIKDAFSDHSDSSDSDDDGHKAHH
        H  G       G   GH H        GH QP  AN N G C+P           G +K  HHKNKEGGFLNKIKDAFSDHSD+SDSDDD  +  H
Subjt:  HCFGHMSDKIKGVFRGHHH--------GHGQPPAANANCGQCKP-----------GPKKSEHHKNKEGGFLNKIKDAFSDHSDSSDSDDDGHKAHH

XP_038875375.1 uncharacterized protein LOC120067846 [Benincasa hispida]2.1e-2262.5Show/hide
Query:  MASMQCSKPAEKSQQQKHDQHQQDHCF-GHMSDKIKGVFRGHHHGH----GQPPAANANCGQCKP--GPKKSEHHKNKEGGFLNKIKDAFSDH-SDSSDS
        MAS+QC+KPA+   QQKHDQ Q  HCF GH+SDKIKGVF+GHHHG       P   +AN   CKP    KK EHHKNKEGG L+KIKDAFSDH SDSSDS
Subjt:  MASMQCSKPAEKSQQQKHDQHQQDHCF-GHMSDKIKGVFRGHHHGH----GQPPAANANCGQCKP--GPKKSEHHKNKEGGFLNKIKDAFSDH-SDSSDS

Query:  DDDGHKAHHKRK
        +++  K HH +K
Subjt:  DDDGHKAHHKRK

TrEMBL top hitse value%identityAlignment
A0A1S3AUH3 uncharacterized protein LOC1034828151.3e-1754.31Show/hide
Query:  MASMQCSKPAEKS---QQQKHDQHQQDHCF-GHMSDKIKGVF-RGHHHGHGQPPAA----NANCGQCK--PGPKKSEHHKNKEGGFLNKIKDAFSDH-SD
        MA  QC+KPA+ +    QQKHDQ    HCF GH+SDKIKGVF +GHHH    P +     +AN   CK     KK EH   KEGG L+KIK+AFSDH SD
Subjt:  MASMQCSKPAEKS---QQQKHDQHQQDHCF-GHMSDKIKGVF-RGHHHGHGQPPAA----NANCGQCK--PGPKKSEHHKNKEGGFLNKIKDAFSDH-SD

Query:  SSDSDDDGHKAHHKRK
        SSDS+++ HK HH +K
Subjt:  SSDSDDDGHKAHHKRK

A0A5A7TMV4 Uncharacterized protein1.0e-0650Show/hide
Query:  MASMQCSKPAEKS---QQQKHDQHQQDHCF-GHMSDKIKGVF-RGHHHGHGQPPAA----NANCGQCK--PGPKKSEHHKNKEG
        MA  QC+KPA+ +    QQKHDQ    HCF GH+SDKIKGVF +GHHH    P +     +AN   CK     KK EH   KEG
Subjt:  MASMQCSKPAEKS---QQQKHDQHQQDHCF-GHMSDKIKGVF-RGHHHGHGQPPAA----NANCGQCK--PGPKKSEHHKNKEG

A0A6J1CWW2 uncharacterized protein LOC1110153156.5e-2261.74Show/hide
Query:  MASMQCSKPAEK--SQQQKHDQHQQDHCFGHMSDKIKGVFRGHHHGHGQPPAA--------NANCGQCKPGPKKSEHHKNKEGGFLNKIKDAFSDH-SDS
        MAS+QCSKPA++  SQ QKHD   Q HCFGH+SDKIKGVF+GH H HGQ P A        NAN        K+ E HKNK+G  L+KIKDAFSDH SDS
Subjt:  MASMQCSKPAEK--SQQQKHDQHQQDHCFGHMSDKIKGVFRGHHHGHGQPPAA--------NANCGQCKPGPKKSEHHKNKEGGFLNKIKDAFSDH-SDS

Query:  SDSDDDGHKAHHKRK
        SDSD++GHKAH K K
Subjt:  SDSDDDGHKAHHKRK

A0A6J1H399 glycine-rich cell wall structural protein 1-like2.2e-0948.96Show/hide
Query:  HCFGHMSDKIKGVFRGHHH--------GHGQPPAANANCGQCKP-----------GPKKSEHHKNKEGGFLNKIKDAFSDHSDSSDSDDDGHKAHH
        H  G       G   GH H        GH QP  AN N G C+P           G +K  HHKNKEGGFLNKIKDAFSDHSD+SDSDDD  +  H
Subjt:  HCFGHMSDKIKGVFRGHHH--------GHGQPPAANANCGQCKP-----------GPKKSEHHKNKEGGFLNKIKDAFSDHSDSSDSDDDGHKAHH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCTATGCAATGCAGCAAACCAGCTGAAAAGAGCCAGCAACAGAAGCACGACCAACACCAACAGGACCATTGCTTTGGCCACATGTCCGACAAGATCAAAGGCGT
CTTCAGAGGCCACCATCATGGTCATGGCCAGCCTCCTGCGGCCAATGCCAACTGCGGTCAGTGCAAGCCAGGCCCTAAGAAGAGCGAACACCACAAGAATAAAGAAGGGG
GTTTCTTGAACAAGATCAAGGATGCCTTCTCCGACCACAGCGACAGCAGCGACAGCGACGATGACGGTCACAAAGCCCACCACAAAAGGAAGGCAAGTGTTTTGAAGGGA
GATTTGAACCTCAAACCTCGTGATCGAAGAACTGAAGGGAGAGAAGGAAGGTTGACTGGATTTAAAGGAATTAGAGGCTGCCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCTATGCAATGCAGCAAACCAGCTGAAAAGAGCCAGCAACAGAAGCACGACCAACACCAACAGGACCATTGCTTTGGCCACATGTCCGACAAGATCAAAGGCGT
CTTCAGAGGCCACCATCATGGTCATGGCCAGCCTCCTGCGGCCAATGCCAACTGCGGTCAGTGCAAGCCAGGCCCTAAGAAGAGCGAACACCACAAGAATAAAGAAGGGG
GTTTCTTGAACAAGATCAAGGATGCCTTCTCCGACCACAGCGACAGCAGCGACAGCGACGATGACGGTCACAAAGCCCACCACAAAAGGAAGGCAAGTGTTTTGAAGGGA
GATTTGAACCTCAAACCTCGTGATCGAAGAACTGAAGGGAGAGAAGGAAGGTTGACTGGATTTAAAGGAATTAGAGGCTGCCTCTAA
Protein sequenceShow/hide protein sequence
MASMQCSKPAEKSQQQKHDQHQQDHCFGHMSDKIKGVFRGHHHGHGQPPAANANCGQCKPGPKKSEHHKNKEGGFLNKIKDAFSDHSDSSDSDDDGHKAHHKRKASVLKG
DLNLKPRDRRTEGREGRLTGFKGIRGCL