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Spg029254 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg029254
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionethylene-responsive transcription factor 12
Genome locationscaffold12:34594885..34595412
RNA-Seq ExpressionSpg029254
SyntenySpg029254
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR017392 - AP2/ERF transcription factor ERF/PTI6
IPR036955 - AP2/ERF domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583981.1 Ethylene-responsive transcription factor 12, partial [Cucurbita argyrosperma subsp. sororia]7.3e-4971.88Show/hide
Query:  MASTREGHYRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFPPPLSAAAGLSLDLNV-SRPTSCNWP----TAAGAA
        MASTRE HYRGVRKRPWGRY AEIRDPWKKT VWLGTFDTPEEAALAYD AARSLRGSKAKTNFPPP      LSLDLNV S PT+CNWP    +AA AA
Subjt:  MASTREGHYRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFPPPLSAAAGLSLDLNV-SRPTSCNWP----TAAGAA

Query:  TCSPSSSS----ARLVLGDFLRHGARNDLC--NVEASPATKRLAGGFVDFFATSTSTTVT
        T +PSSSS    ARL+LGDFLRHGARNDLC  NVEASP       G VD    + +TT +
Subjt:  TCSPSSSS----ARLVLGDFLRHGARNDLC--NVEASPATKRLAGGFVDFFATSTSTTVT

KAG7019604.1 Ethylene-responsive transcription factor 12, partial [Cucurbita argyrosperma subsp. argyrosperma]3.6e-4870.44Show/hide
Query:  MASTREGHYRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFPPPLSAAAGLSLDLNV-SRPTSCNWPT-------AA
        MASTRE HYRGVRKRPWGRY AEIRDPWKKT VWLGTFDTPEEAALAYD AARSLRGSKAKTNFPPP      LSLDLNV S PT+CNWP+       AA
Subjt:  MASTREGHYRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFPPPLSAAAGLSLDLNV-SRPTSCNWPT-------AA

Query:  GAATCSPSSSSARLVLGDFLRHGARNDLC--NVEASPATKRLAGGFVDFFATSTSTTVT
         A + S SSS+ARL+LGDFLRHGARNDLC  NVEASP       G VD    + +TT +
Subjt:  GAATCSPSSSSARLVLGDFLRHGARNDLC--NVEASPATKRLAGGFVDFFATSTSTTVT

XP_022927218.1 ethylene-responsive transcription factor 12-like [Cucurbita moschata]2.8e-4870.89Show/hide
Query:  MASTREGHYRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFPPPLSAAAGLSLDLNV-SRPTSCNWPT------AAG
        MASTRE HYRGVRKRPWGRY AEIRDPWKKT VWLGTFDTPEEAALAYD AARSLRGSKAKTNFPPP      LSLDLNV S PT+CNWP+      AA 
Subjt:  MASTREGHYRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFPPPLSAAAGLSLDLNV-SRPTSCNWPT------AAG

Query:  AATCSPSSSSARLVLGDFLRHGARNDLC--NVEASPATKRLAGGFVDFFATSTSTTVT
        A + S SSS+ARL+LGDFLRHGARNDLC  NVEASP       G VD    + +TT +
Subjt:  AATCSPSSSSARLVLGDFLRHGARNDLC--NVEASPATKRLAGGFVDFFATSTSTTVT

XP_023001756.1 ethylene-responsive transcription factor 12 [Cucurbita maxima]8.7e-5073.03Show/hide
Query:  MASTREGHYRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFPPPLSAAAGLSLDLNV-SRPTSCNWPTAAGAATCSP
        MASTRE HYRGVRKRPWGRY AEIRDPWKKT VWLGTFDTPEEAALAYD AARSLRGSKAKTNFPPP      LSLDLNV S PT+CNWP+++ A + S 
Subjt:  MASTREGHYRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFPPPLSAAAGLSLDLNV-SRPTSCNWPTAAGAATCSP

Query:  SSSSARLVLGDFLRHGARNDLC--NVEASPATKRLAGGFVDFFATSTSTTVT
        SSSSARL+LGDFLRHGARNDLC  NVEASP       G VD    + +TT +
Subjt:  SSSSARLVLGDFLRHGARNDLC--NVEASPATKRLAGGFVDFFATSTSTTVT

XP_023520106.1 ethylene-responsive transcription factor 12 [Cucurbita pepo subsp. pepo]2.8e-4871.34Show/hide
Query:  MASTREGHYRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFPPPLSAAAGLSLDLNV-SRPTSCNWP-----TAAGA
        MASTRE HYRGVRKRPWGRY AEIRDPWKKT VWLGTFDTPEEAALAYD AARSLRGSKAKTNFPPP      LSLDLNV S PT+CNWP     +AA A
Subjt:  MASTREGHYRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFPPPLSAAAGLSLDLNV-SRPTSCNWP-----TAAGA

Query:  ATCSPSSSSARLVLGDFLRHGARNDLC--NVEASPATKRLAGGFVDFFATSTSTTVT
         + S SSS+ARL+LGDFLRHGARNDLC  NVEASP       G VD    + +TT +
Subjt:  ATCSPSSSSARLVLGDFLRHGARNDLC--NVEASPATKRLAGGFVDFFATSTSTTVT

TrEMBL top hitse value%identityAlignment
A0A0A0LSE4 AP2/ERF domain-containing protein2.5e-4770.59Show/hide
Query:  MASTREGHYRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSRPTSCNWPTAAGAATC---
        MASTREGHYRGVRKRPWGRY AEIRDPWKKT VWLGTFDTPEEAALAYD AARSLRGSKAKTNFPPPL    GLSLDLNVS P    WPT   A  C   
Subjt:  MASTREGHYRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSRPTSCNWPTAAGAATC---

Query:  --SPSSSSARLVLGDFLRHGARNDLC--NVEASPATKRLAGGFVDFFATSTST
          SPS SS R +LGDFLRHG RND+C  NV+ASP         VD  A+ +ST
Subjt:  --SPSSSSARLVLGDFLRHGARNDLC--NVEASPATKRLAGGFVDFFATSTST

A0A1S3B631 ethylene-responsive transcription factor 128.8e-4871.81Show/hide
Query:  MASTREGHYRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSRPTSCNWPTAAGAATC---
        MASTREGHYRGVRKRPWGRY AEIRDPWKKT VWLGTFDTPEEAALAYD AARSLRGSKAKTNFPPPL    GLSLDLNVS P    WPT   A  C   
Subjt:  MASTREGHYRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSRPTSCNWPTAAGAATC---

Query:  SPSSSSARLVLGDFLRHGARNDLCNVEASPATKRLAGGFVDFFATSTST
        S SSSSAR +LGDFLRHG RND+CN+    A+  L    VD  A+++ST
Subjt:  SPSSSSARLVLGDFLRHGARNDLCNVEASPATKRLAGGFVDFFATSTST

A0A5D3DSV2 Ethylene-responsive transcription factor 128.8e-4871.81Show/hide
Query:  MASTREGHYRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSRPTSCNWPTAAGAATC---
        MASTREGHYRGVRKRPWGRY AEIRDPWKKT VWLGTFDTPEEAALAYD AARSLRGSKAKTNFPPPL    GLSLDLNVS P    WPT   A  C   
Subjt:  MASTREGHYRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSRPTSCNWPTAAGAATC---

Query:  SPSSSSARLVLGDFLRHGARNDLCNVEASPATKRLAGGFVDFFATSTST
        S SSSSAR +LGDFLRHG RND+CN+    A+  L    VD  A+++ST
Subjt:  SPSSSSARLVLGDFLRHGARNDLCNVEASPATKRLAGGFVDFFATSTST

A0A6J1EKE1 ethylene-responsive transcription factor 12-like1.4e-4870.89Show/hide
Query:  MASTREGHYRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFPPPLSAAAGLSLDLNV-SRPTSCNWPT------AAG
        MASTRE HYRGVRKRPWGRY AEIRDPWKKT VWLGTFDTPEEAALAYD AARSLRGSKAKTNFPPP      LSLDLNV S PT+CNWP+      AA 
Subjt:  MASTREGHYRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFPPPLSAAAGLSLDLNV-SRPTSCNWPT------AAG

Query:  AATCSPSSSSARLVLGDFLRHGARNDLC--NVEASPATKRLAGGFVDFFATSTSTTVT
        A + S SSS+ARL+LGDFLRHGARNDLC  NVEASP       G VD    + +TT +
Subjt:  AATCSPSSSSARLVLGDFLRHGARNDLC--NVEASPATKRLAGGFVDFFATSTSTTVT

A0A6J1KJH9 ethylene-responsive transcription factor 124.2e-5073.03Show/hide
Query:  MASTREGHYRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFPPPLSAAAGLSLDLNV-SRPTSCNWPTAAGAATCSP
        MASTRE HYRGVRKRPWGRY AEIRDPWKKT VWLGTFDTPEEAALAYD AARSLRGSKAKTNFPPP      LSLDLNV S PT+CNWP+++ A + S 
Subjt:  MASTREGHYRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFPPPLSAAAGLSLDLNV-SRPTSCNWPTAAGAATCSP

Query:  SSSSARLVLGDFLRHGARNDLC--NVEASPATKRLAGGFVDFFATSTSTTVT
        SSSSARL+LGDFLRHGARNDLC  NVEASP       G VD    + +TT +
Subjt:  SSSSARLVLGDFLRHGARNDLC--NVEASPATKRLAGGFVDFFATSTSTTVT

SwissProt top hitse value%identityAlignment
Q40477 Ethylene-responsive transcription factor 49.4e-2379.37Show/hide
Query:  REGHYRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFPPP
        +E HYRGVRKRPWGRY AEIRDP KK+ VWLGTFDT EEAA AYD AAR  RG KAKTNFP P
Subjt:  REGHYRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFPPP

Q94ID6 Ethylene-responsive transcription factor 123.0e-2968.27Show/hide
Query:  MAST---REGHYRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSRPTSCNWPTAAGAATC
        MAST   RE HYRGVRKRPWGRY AEIRDPWKKT VWLGTFDTPEEAALAYD AAR LRG KAKTNFP P      LSLDLN       + P+A  AAT 
Subjt:  MAST---REGHYRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSRPTSCNWPTAAGAATC

Query:  SPSS
        + ++
Subjt:  SPSS

Q9FE67 Ethylene-responsive transcription factor 94.2e-2380.95Show/hide
Query:  REGHYRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFPPP
        +E H+RGVRKRPWGRY AEIRDP KKT VWLGTFDT EEAA AYD AAR  RGSKAKTNFP P
Subjt:  REGHYRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFPPP

Q9LW49 Ethylene-responsive transcription factor 41.6e-2279.37Show/hide
Query:  REGHYRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFPPP
        +E HYRGVRKRPWGRY AEIRDP KK+ VWLGTFDT EEAA AYD AAR  RG KAKTNFP P
Subjt:  REGHYRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFPPP

Q9SXS8 Ethylene-responsive transcription factor 32.1e-2275Show/hide
Query:  TREGHYRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFPPP
        ++E  +RGVRKRPWGR+ AEIRDPWKKT VWLGTFD+ E+AA AYD AAR+LRG KAKTNFP P
Subjt:  TREGHYRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFPPP

Arabidopsis top hitse value%identityAlignment
AT1G28360.1 ERF domain protein 122.1e-3068.27Show/hide
Query:  MAST---REGHYRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSRPTSCNWPTAAGAATC
        MAST   RE HYRGVRKRPWGRY AEIRDPWKKT VWLGTFDTPEEAALAYD AAR LRG KAKTNFP P      LSLDLN       + P+A  AAT 
Subjt:  MAST---REGHYRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSRPTSCNWPTAAGAATC

Query:  SPSS
        + ++
Subjt:  SPSS

AT1G28370.1 ERF domain protein 112.1e-2263.53Show/hide
Query:  TREGH---YRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSRPTS
        T EG+   YRGVRKRPWGRY AEIRDP+KK+ VWLGTFDTPEEAA AYD  A   RG+KAKTNFP     A  LSL  ++S+ ++
Subjt:  TREGH---YRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSRPTS

AT1G50640.1 ethylene responsive element binding factor 31.9e-2362.35Show/hide
Query:  STREGHYRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSRPTSCN
        S +E  +RGVRKRPWGR+ AEIRDPWKK  VWLGTFD+ EEAA AYD AAR+LRG KAKTNFP   S+    +L  N  R  + N
Subjt:  STREGHYRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSRPTSCN

AT3G15210.1 ethylene responsive element binding factor 44.3e-2377.78Show/hide
Query:  STREGHYRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFP
        + +E  YRGVRKRPWGRY AEIRDP KKT VWLGTFDT EEAA AYD AAR  RG+KAKTNFP
Subjt:  STREGHYRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFP

AT5G44210.1 erf domain protein 93.0e-2480.95Show/hide
Query:  REGHYRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFPPP
        +E H+RGVRKRPWGRY AEIRDP KKT VWLGTFDT EEAA AYD AAR  RGSKAKTNFP P
Subjt:  REGHYRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFPPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCACTCGCGAGGGCCACTACAGAGGCGTCAGAAAGCGCCCATGGGGTCGCTACGTCGCCGAGATACGCGACCCTTGGAAGAAGACCCATGTCTGGTTGGGCAC
TTTCGACACTCCTGAAGAAGCCGCCCTTGCCTACGACGACGCCGCCAGGTCCCTCCGCGGCTCCAAGGCTAAAACCAACTTCCCCCCGCCTCTCTCCGCCGCTGCCGGCC
TCTCCCTCGACCTCAACGTCTCCAGACCCACTTCCTGCAACTGGCCCACTGCCGCCGGCGCCGCCACTTGCTCGCCGTCTTCCTCTTCGGCACGTCTCGTCCTCGGTGAT
TTCCTCCGGCACGGCGCTCGCAACGACCTGTGCAATGTGGAGGCGTCTCCAGCGACGAAACGCCTCGCCGGCGGTTTCGTCGATTTCTTCGCCACTTCTACATCAACAAC
TGTTACAGAGACGCTCTCCTCTGCGACAATGGAGTTAGATCGCCGTCGGAAGTATGTGCACTATCACTGTTTCACAAAACGCTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCACTCGCGAGGGCCACTACAGAGGCGTCAGAAAGCGCCCATGGGGTCGCTACGTCGCCGAGATACGCGACCCTTGGAAGAAGACCCATGTCTGGTTGGGCAC
TTTCGACACTCCTGAAGAAGCCGCCCTTGCCTACGACGACGCCGCCAGGTCCCTCCGCGGCTCCAAGGCTAAAACCAACTTCCCCCCGCCTCTCTCCGCCGCTGCCGGCC
TCTCCCTCGACCTCAACGTCTCCAGACCCACTTCCTGCAACTGGCCCACTGCCGCCGGCGCCGCCACTTGCTCGCCGTCTTCCTCTTCGGCACGTCTCGTCCTCGGTGAT
TTCCTCCGGCACGGCGCTCGCAACGACCTGTGCAATGTGGAGGCGTCTCCAGCGACGAAACGCCTCGCCGGCGGTTTCGTCGATTTCTTCGCCACTTCTACATCAACAAC
TGTTACAGAGACGCTCTCCTCTGCGACAATGGAGTTAGATCGCCGTCGGAAGTATGTGCACTATCACTGTTTCACAAAACGCTTTTGA
Protein sequenceShow/hide protein sequence
MASTREGHYRGVRKRPWGRYVAEIRDPWKKTHVWLGTFDTPEEAALAYDDAARSLRGSKAKTNFPPPLSAAAGLSLDLNVSRPTSCNWPTAAGAATCSPSSSSARLVLGD
FLRHGARNDLCNVEASPATKRLAGGFVDFFATSTSTTVTETLSSATMELDRRRKYVHYHCFTKRF