CuGenDBv2

Gene ID	Spg029318
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ubiquitin-conjugating enzyme E2
Genome location	scaffold12:35981710..35986433
RNA-Seq Expression	Spg029318
Synteny	Spg029318
Gene Ontology terms	GO:0000209 - protein polyubiquitination (biological process) GO:0006511 - ubiquitin-dependent protein catabolic process (biological process) GO:0005634 - nucleus (cellular component) GO:0005524 - ATP binding (molecular function) GO:0061631 - ubiquitin conjugating enzyme activity (molecular function)
InterPro domains	IPR000608 - Ubiquitin-conjugating enzyme E2 IPR016135 - Ubiquitin-conjugating enzyme/RWD-like

Homology

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GenBank top hits

e value

%identity

Alignment

AES82755.1 ubiquitin-conjugating enzyme E2 [Medicago truncatula]

7.7e-33

57.34

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Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP------KVFHGSINTLDHVSTGLIEHSVASFIGAV
        MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLV IHFPPDYPFKPP      KVFH +IN+   +   +++   +  +   
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP------KVFHGSINTLDHVSTGLIEHSVASFIGAV

Query:  EDLDHLSESCAFFALIWDHFFDQSYPSNTPLPRLFTKEFALIQ
        + L  L+    FF             SNTPL  +  + FA+ Q
Subjt:  EDLDHLSESCAFFALIWDHFFDQSYPSNTPLPRLFTKEFALIQ

KAG6606055.1 putative inactive receptor kinase, partial [Cucurbita argyrosperma subsp. sororia]

1.7e-32

88.75

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Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP------KVFHGSINT
        MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP      KVFH +IN+
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP------KVFHGSINT

ONM12406.1 Ubiquitin-conjugating enzyme E2 11 [Zea mays]

1.3e-32

91.89

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Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVFHGSINT
        MASKRILKELKDLQKDPPTSCSAGPV EDMFHWQATIMGP DSP+AGGVFLVNIHFPPDYPFKPPKVFH +IN+
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVFHGSINT

XP_011654707.1 ubiquitin-conjugating enzyme E2-17 kDa [Cucumis sativus]

1.7e-32

88.75

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Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP------KVFHGSINT
        MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP      KVFH +IN+
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP------KVFHGSINT

XP_023550211.1 ubiquitin-conjugating enzyme E2-17 kDa-like [Cucurbita pepo subsp. pepo]

1.7e-32

88.75

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Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP------KVFHGSINT
        MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP      KVFH +IN+
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP------KVFHGSINT

TrEMBL top hits

e value

%identity

Alignment

A0A096RLQ7 Ubiquitin-conjugating enzyme E2 11

6.4e-33

91.89

Show/hide

Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVFHGSINT
        MASKRILKELKDLQKDPPTSCSAGPV EDMFHWQATIMGP DSP+AGGVFLVNIHFPPDYPFKPPKVFH +IN+
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVFHGSINT

A0A5A7TH72 Ubiquitin-conjugating enzyme E2-17 kDa

8.3e-33

88.75

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Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP------KVFHGSINT
        MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP      KVFH +IN+
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP------KVFHGSINT

A0A6J1H1V5 ubiquitin-conjugating enzyme E2-17 kDa-like

8.3e-33

88.75

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Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP------KVFHGSINT
        MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP      KVFH +IN+
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP------KVFHGSINT

A0A6J1K529 ubiquitin-conjugating enzyme E2-17 kDa-like

8.3e-33

88.75

Show/hide

Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP------KVFHGSINT
        MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP      KVFH +IN+
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP------KVFHGSINT

G7L405 Ubiquitin-conjugating enzyme E2

3.7e-33

57.34

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Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP------KVFHGSINTLDHVSTGLIEHSVASFIGAV
        MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLV IHFPPDYPFKPP      KVFH +IN+   +   +++   +  +   
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP------KVFHGSINTLDHVSTGLIEHSVASFIGAV

Query:  EDLDHLSESCAFFALIWDHFFDQSYPSNTPLPRLFTKEFALIQ
        + L  L+    FF             SNTPL  +  + FA+ Q
Subjt:  EDLDHLSESCAFFALIWDHFFDQSYPSNTPLPRLFTKEFALIQ

SwissProt top hits

e value

%identity

Alignment

P35132 SUMO-conjugating enzyme UBC9

2.1e-33

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Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP------KVFHGSINT
        MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLV IHFPPDYPFKPP      KVFH +IN+
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP------KVFHGSINT

P35133 Ubiquitin-conjugating enzyme E2 10

2.8e-33

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Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP------KVFHGSINT
        MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP +SPYAGGVFLV IHFPPDYPFKPP      KVFH +IN+
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP------KVFHGSINT

P35135 Ubiquitin-conjugating enzyme E2-17 kDa

7.3e-34

86.25

Show/hide

Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP------KVFHGSINT
        MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPYAGGVFLV+IHFPPDYPFKPP      KVFH +IN+
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP------KVFHGSINT

Q8S919 Ubiquitin-conjugating enzyme E2 5B

1.6e-33

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Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP------KVFHGSINT
        MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQAT+MGP DSPYAGGVFLV IHFPPDYPFKPP      KVFH +IN+
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP------KVFHGSINT

Q94F47 Ubiquitin-conjugating enzyme E2 28

2.8e-33

83.75

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Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP------KVFHGSINT
        MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLV IHFPPDYPFKPP      KVFH ++N+
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP------KVFHGSINT

Arabidopsis top hits

e value

%identity

Alignment

AT1G64230.1 ubiquitin-conjugating enzyme 28

2.0e-34

83.75

Show/hide

Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP------KVFHGSINT
        MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLV IHFPPDYPFKPP      KVFH ++N+
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP------KVFHGSINT

AT1G64230.2 ubiquitin-conjugating enzyme 28

2.0e-34

83.75

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Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP------KVFHGSINT
        MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLV IHFPPDYPFKPP      KVFH ++N+
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP------KVFHGSINT

AT4G27960.1 ubiquitin conjugating enzyme 9

1.5e-34

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Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP------KVFHGSINT
        MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLV IHFPPDYPFKPP      KVFH +IN+
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP------KVFHGSINT

AT4G27960.2 ubiquitin conjugating enzyme 9

1.5e-34

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Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP------KVFHGSINT
        MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLV IHFPPDYPFKPP      KVFH +IN+
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP------KVFHGSINT

AT5G53300.1 ubiquitin-conjugating enzyme 10

2.0e-34

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Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP------KVFHGSINT
        MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP +SPYAGGVFLV IHFPPDYPFKPP      KVFH +IN+
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPP------KVFHGSINT

Sequences

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CDS sequence

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ATGGCTTCGAAGCGGATCTTGAAAGAGCTCAAGGATCTCCAGAAGGATCCTCCTACGTCTTGCAGTGCAGGCCCAGTAGCTGAAGACATGTTCCATTGGCAAGCAACAAT
TATGGGCCCTCCTGACAGTCCATATGCAGGAGGAGTGTTTCTTGTGAACATTCATTTCCCTCCAGATTATCCATTTAAACCACCCAAGGTCTTCCATGGTAGTATTAATA
CATTGGACCATGTTTCAACTGGTTTGATTGAGCACAGTGTTGCATCCTTTATAGGGGCGGTTGAGGATTTGGACCACCTTTCTGAGAGTTGTGCTTTTTTCGCTTTGATT
TGGGATCATTTTTTCGACCAGTCTTATCCGTCAAACACTCCTTTACCAAGGCTTTTTACCAAGGAGTTTGCTCTTATCCAGCACTCGAGGAATTTAACGAAATGGCTATG
TCAGGGGCATGGCTCTGATACCACTTGTAAAGGACAAGGACACTACACAAATCTCCTTGTGGCTGATATTCATGGGAGGTTAATCGACAAACAAGTCCAAAATGAAGGAG
TCCCAAAAGTAGGGAGAGCTGGAGAGATCAAGTTTTGGTCCGTTAATTCACAGATGGCACAATTATTTTTGCTTCAGAAAAGATGGAAATCTGGAGAACTTATCAAAATC
CTTCCTGTTTTTGAGGTGGCTTCTGGCTTAAATGTAACACGGCATCTTCCACTAGGTTGA

mRNA sequence

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Protein sequence

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MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVFHGSINTLDHVSTGLIEHSVASFIGAVEDLDHLSESCAFFALI
WDHFFDQSYPSNTPLPRLFTKEFALIQHSRNLTKWLCQGHGSDTTCKGQGHYTNLLVADIHGRLIDKQVQNEGVPKVGRAGEIKFWSVNSQMAQLFLLQKRWKSGELIKI
LPVFEVASGLNVTRHLPLG

Spg029318 (gene) of Sponge gourd (cylindrica) v1 genome