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Spg029323 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg029323
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionF-box/LRR-repeat protein
Genome locationscaffold12:37225675..37225941
RNA-Seq ExpressionSpg029323
SyntenySpg029323
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042782.1 F-box/LRR-repeat protein [Cucumis melo var. makuwa]2.6e-1868.18Show/hide
Query:  MASQNPISRSLLLFLFTILLITTPLSAARGLPAAAQHPANDPLRPPTTSTTFSLTEPTAAVEDVTTPGNYFAAVSLRKVPGGPNPLHN
        MASQN    SL LFLF ILL TTPL AAR LPA+A  P ND LRPPTT TTFS  +P AAV+D  T  NY   VSLRKVP GPNPLHN
Subjt:  MASQNPISRSLLLFLFTILLITTPLSAARGLPAAAQHPANDPLRPPTTSTTFSLTEPTAAVEDVTTPGNYFAAVSLRKVPGGPNPLHN

KAG6579492.1 hypothetical protein SDJN03_23940, partial [Cucurbita argyrosperma subsp. sororia]6.6e-1464.04Show/hide
Query:  MASQNPISRSLLLFLFTILLITT-PLSAARGLPAAAQHPANDPLRPPTTSTTFSLTEPTAAVEDVTTPGNYFAAVSLRKVPGGPNPLHN
        MASQNPI+ SL LFLF ILL TT PLSA R L  A QHP ND L PPTTS  FS  +P   VE+     NY  AVS RKVP GPNPLHN
Subjt:  MASQNPISRSLLLFLFTILLITT-PLSAARGLPAAAQHPANDPLRPPTTSTTFSLTEPTAAVEDVTTPGNYFAAVSLRKVPGGPNPLHN

KAG6606114.1 Methyl-CpG-binding domain-containing protein 13, partial [Cucurbita argyrosperma subsp. sororia]6.4e-0960.98Show/hide
Query:  MASQNPISRSLLLFLFTILLITTPLSAARGLPAAAQHPANDPLRPPTTSTTFSLTEPTAAVEDVTTPGNYFAAVSLRKVPGG
        MAS NP S  LLLFL TILL T  LSA     A AQ P ND L+PP TS+TFSL +   AVEDV  P N+  AVSLRKVP G
Subjt:  MASQNPISRSLLLFLFTILLITTPLSAARGLPAAAQHPANDPLRPPTTSTTFSLTEPTAAVEDVTTPGNYFAAVSLRKVPGG

KGN50125.1 hypothetical protein Csa_000058 [Cucumis sativus]8.6e-1465.22Show/hide
Query:  MASQNPI-SRSLLLFLFTILL-ITTPLSAARGLPAAAQHPAND--PLRPPTTSTTFSLTEPTAAVEDVTTPGNYFAAVSLRKVPGGPNPLHN
        MASQN I   SL LFLF ILL  TTPL AAR  P +A  P ND   L PPTTS TFS T+P AAVED  T  NY   VSLRKVP GPNPLHN
Subjt:  MASQNPI-SRSLLLFLFTILL-ITTPLSAARGLPAAAQHPAND--PLRPPTTSTTFSLTEPTAAVEDVTTPGNYFAAVSLRKVPGGPNPLHN

TrEMBL top hitse value%identityAlignment
A0A0A0KKA9 Uncharacterized protein4.2e-1465.22Show/hide
Query:  MASQNPI-SRSLLLFLFTILL-ITTPLSAARGLPAAAQHPAND--PLRPPTTSTTFSLTEPTAAVEDVTTPGNYFAAVSLRKVPGGPNPLHN
        MASQN I   SL LFLF ILL  TTPL AAR  P +A  P ND   L PPTTS TFS T+P AAVED  T  NY   VSLRKVP GPNPLHN
Subjt:  MASQNPI-SRSLLLFLFTILL-ITTPLSAARGLPAAAQHPAND--PLRPPTTSTTFSLTEPTAAVEDVTTPGNYFAAVSLRKVPGGPNPLHN

A0A5A7THA6 F-box/LRR-repeat protein1.2e-1868.18Show/hide
Query:  MASQNPISRSLLLFLFTILLITTPLSAARGLPAAAQHPANDPLRPPTTSTTFSLTEPTAAVEDVTTPGNYFAAVSLRKVPGGPNPLHN
        MASQN    SL LFLF ILL TTPL AAR LPA+A  P ND LRPPTT TTFS  +P AAV+D  T  NY   VSLRKVP GPNPLHN
Subjt:  MASQNPISRSLLLFLFTILLITTPLSAARGLPAAAQHPANDPLRPPTTSTTFSLTEPTAAVEDVTTPGNYFAAVSLRKVPGGPNPLHN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTCAAAATCCCATTTCCCGTTCTCTCCTCCTCTTCCTCTTCACAATTCTCCTCATCACCACCCCTCTCTCCGCCGCCCGTGGCCTCCCCGCCGCCGCACAACA
TCCAGCAAATGATCCTCTCCGCCCACCCACCACCTCAACAACATTCTCACTCACGGAGCCAACTGCCGCCGTGGAGGACGTCACCACACCCGGAAATTACTTCGCCGCCG
TTTCGCTCCGGAAAGTCCCCGGCGGACCGAACCCGCTCCATAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTCAAAATCCCATTTCCCGTTCTCTCCTCCTCTTCCTCTTCACAATTCTCCTCATCACCACCCCTCTCTCCGCCGCCCGTGGCCTCCCCGCCGCCGCACAACA
TCCAGCAAATGATCCTCTCCGCCCACCCACCACCTCAACAACATTCTCACTCACGGAGCCAACTGCCGCCGTGGAGGACGTCACCACACCCGGAAATTACTTCGCCGCCG
TTTCGCTCCGGAAAGTCCCCGGCGGACCGAACCCGCTCCATAACTAA
Protein sequenceShow/hide protein sequence
MASQNPISRSLLLFLFTILLITTPLSAARGLPAAAQHPANDPLRPPTTSTTFSLTEPTAAVEDVTTPGNYFAAVSLRKVPGGPNPLHN