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Spg029326 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg029326
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold12:33513216..33514597
RNA-Seq ExpressionSpg029326
SyntenySpg029326
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0044260 - cellular macromolecule metabolic process (biological process)
GO:0050789 - regulation of biological process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0005488 - binding (molecular function)
GO:0016853 - isomerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032235.1 peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 [Cucumis melo var. makuwa]3.5e-1967.16Show/hide
Query:  RALLAKWLWRFRLESDSFWVRNIVSKHGKHPFMWLSSGIKGTFRNSWKDISLELPSFSFLVQCMVGD
        RALLAKWLW F LE DS W R I+SKHG  PF W++ G+KGTFRN WKDIS+ELP+FS  V C +GD
Subjt:  RALLAKWLWRFRLESDSFWVRNIVSKHGKHPFMWLSSGIKGTFRNSWKDISLELPSFSFLVQCMVGD

KAA0037027.1 uncharacterized protein E6C27_scaffold86G001160 [Cucumis melo var. makuwa]2.5e-1741.51Show/hide
Query:  RALLAKWLWRFRLESDSFWVRNIVSKHGKHPFMWLSSGIKGTFRNSWKDISLELPSFSFLVQCMVGDGRDIYFWEDIRVGDRSLCSMFSRLYLLSSMKNR
        +ALLAKWLWRF L+  S W R IVSK+G  PF W++ GI G     WKDISLE+ SF    +C+VGD  D Y +              + LY LS    +
Subjt:  RALLAKWLWRFRLESDSFWVRNIVSKHGKHPFMWLSSGIKGTFRNSWKDISLELPSFSFLVQCMVGDGRDIYFWEDIRVGDRSLCSMFSRLYLLSSMKNR

Query:  TMVNILGSAEEDLDHLLWDCCFARSVWSFFFEVFEFQTIGQRRSREMIEEFLLH-PLFR
             LG +       L + C        FF+ F FQ+ GQR+ R MIEEF+L+ P FR
Subjt:  TMVNILGSAEEDLDHLLWDCCFARSVWSFFFEVFEFQTIGQRRSREMIEEFLLH-PLFR

RVW89561.1 putative ribonuclease H protein [Vitis vinifera]1.5e-1741.27Show/hide
Query:  ALLAKWLWRFRLESDSFWVRNIVSKHGKHPFMW-LSSGIKGTFRNSWKDISLELPSFSFLVQCMVGDGRDIYFWEDIRVGDRSLCSMFSRLYLLSSMKNR
        ALL KWLWRF  E    W + IVS +G HP  W  +  ++ + R  WK I+     FS  V+ +VG+G+ I FWED+  G++SLCS F+ LY + S+KN 
Subjt:  ALLAKWLWRFRLESDSFWVRNIVSKHGKHPFMW-LSSGIKGTFRNSWKDISLELPSFSFLVQCMVGDGRDIYFWEDIRVGDRSLCSMFSRLYLLSSMKNR

Query:  TMVNILGSAEEDLDHLLWDCCFARSV
        T+ N+LG++      L W+  F R++
Subjt:  TMVNILGSAEEDLDHLLWDCCFARSV

TYK06215.1 peroxin Pex14 isoform X3 [Cucumis melo var. makuwa]2.1e-2442.77Show/hide
Query:  RALLAKWLWRFRLESDSFWVRNIVSKHGKHPFMWLSSGIKGTFRNSWKDISLELPSFSFLVQC-MVGDGRDIYFWEDIRVGDRSLCSMFSRLYLLSSMKN
        +ALLAKWLW F LE DS   R IVSKHG  PF W + G+K TFRN  KDIS EL +F  +V   MV      + W+++        +   RL   +S+  
Subjt:  RALLAKWLWRFRLESDSFWVRNIVSKHGKHPFMWLSSGIKGTFRNSWKDISLELPSFSFLVQC-MVGDGRDIYFWEDIRVGDRSLCSMFSRLYLLSSMKN

Query:  RTMVNILGSAEEDLDHLLWDCCFARSVWSFFFEVFEFQTIGQRRSREMIEEFLLHPLFR
             +   AEEDLDH  WDC +AR+VWS F  +      G    R  IEEFLL   F+
Subjt:  RTMVNILGSAEEDLDHLLWDCCFARSVWSFFFEVFEFQTIGQRRSREMIEEFLLHPLFR

TYK22164.1 peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 [Cucumis melo var. makuwa]3.5e-1967.16Show/hide
Query:  RALLAKWLWRFRLESDSFWVRNIVSKHGKHPFMWLSSGIKGTFRNSWKDISLELPSFSFLVQCMVGD
        RALLAKWLW F LE DS W R I+SKHG  PF W++ G+KGTFRN WKDIS+ELP+FS  V C +GD
Subjt:  RALLAKWLWRFRLESDSFWVRNIVSKHGKHPFMWLSSGIKGTFRNSWKDISLELPSFSFLVQCMVGD

TrEMBL top hitse value%identityAlignment
A0A438HYM9 Putative ribonuclease H protein7.2e-1841.27Show/hide
Query:  ALLAKWLWRFRLESDSFWVRNIVSKHGKHPFMW-LSSGIKGTFRNSWKDISLELPSFSFLVQCMVGDGRDIYFWEDIRVGDRSLCSMFSRLYLLSSMKNR
        ALL KWLWRF  E    W + IVS +G HP  W  +  ++ + R  WK I+     FS  V+ +VG+G+ I FWED+  G++SLCS F+ LY + S+KN 
Subjt:  ALLAKWLWRFRLESDSFWVRNIVSKHGKHPFMW-LSSGIKGTFRNSWKDISLELPSFSFLVQCMVGDGRDIYFWEDIRVGDRSLCSMFSRLYLLSSMKNR

Query:  TMVNILGSAEEDLDHLLWDCCFARSV
        T+ N+LG++      L W+  F R++
Subjt:  TMVNILGSAEEDLDHLLWDCCFARSV

A0A5A7SSQ8 Peptidyl-prolyl cis-trans isomerase CYP23 isoform X11.7e-1967.16Show/hide
Query:  RALLAKWLWRFRLESDSFWVRNIVSKHGKHPFMWLSSGIKGTFRNSWKDISLELPSFSFLVQCMVGD
        RALLAKWLW F LE DS W R I+SKHG  PF W++ G+KGTFRN WKDIS+ELP+FS  V C +GD
Subjt:  RALLAKWLWRFRLESDSFWVRNIVSKHGKHPFMWLSSGIKGTFRNSWKDISLELPSFSFLVQCMVGD

A0A5A7T643 Uncharacterized protein1.2e-1741.51Show/hide
Query:  RALLAKWLWRFRLESDSFWVRNIVSKHGKHPFMWLSSGIKGTFRNSWKDISLELPSFSFLVQCMVGDGRDIYFWEDIRVGDRSLCSMFSRLYLLSSMKNR
        +ALLAKWLWRF L+  S W R IVSK+G  PF W++ GI G     WKDISLE+ SF    +C+VGD  D Y +              + LY LS    +
Subjt:  RALLAKWLWRFRLESDSFWVRNIVSKHGKHPFMWLSSGIKGTFRNSWKDISLELPSFSFLVQCMVGDGRDIYFWEDIRVGDRSLCSMFSRLYLLSSMKNR

Query:  TMVNILGSAEEDLDHLLWDCCFARSVWSFFFEVFEFQTIGQRRSREMIEEFLLH-PLFR
             LG +       L + C        FF+ F FQ+ GQR+ R MIEEF+L+ P FR
Subjt:  TMVNILGSAEEDLDHLLWDCCFARSVWSFFFEVFEFQTIGQRRSREMIEEFLLH-PLFR

A0A5D3C4A7 Peroxin Pex14 isoform X31.0e-2442.77Show/hide
Query:  RALLAKWLWRFRLESDSFWVRNIVSKHGKHPFMWLSSGIKGTFRNSWKDISLELPSFSFLVQC-MVGDGRDIYFWEDIRVGDRSLCSMFSRLYLLSSMKN
        +ALLAKWLW F LE DS   R IVSKHG  PF W + G+K TFRN  KDIS EL +F  +V   MV      + W+++        +   RL   +S+  
Subjt:  RALLAKWLWRFRLESDSFWVRNIVSKHGKHPFMWLSSGIKGTFRNSWKDISLELPSFSFLVQC-MVGDGRDIYFWEDIRVGDRSLCSMFSRLYLLSSMKN

Query:  RTMVNILGSAEEDLDHLLWDCCFARSVWSFFFEVFEFQTIGQRRSREMIEEFLLHPLFR
             +   AEEDLDH  WDC +AR+VWS F  +      G    R  IEEFLL   F+
Subjt:  RTMVNILGSAEEDLDHLLWDCCFARSVWSFFFEVFEFQTIGQRRSREMIEEFLLHPLFR

A0A5D3DEZ6 Peptidyl-prolyl cis-trans isomerase CYP23 isoform X11.7e-1967.16Show/hide
Query:  RALLAKWLWRFRLESDSFWVRNIVSKHGKHPFMWLSSGIKGTFRNSWKDISLELPSFSFLVQCMVGD
        RALLAKWLW F LE DS W R I+SKHG  PF W++ G+KGTFRN WKDIS+ELP+FS  V C +GD
Subjt:  RALLAKWLWRFRLESDSFWVRNIVSKHGKHPFMWLSSGIKGTFRNSWKDISLELPSFSFLVQCMVGD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGATGGAGGAGGAACTCCTCAATCATCTCCCTGTGGTCAGCAAAAGATAACCCTTGCAACCCAAAAACCTGACCAAACCGATCCCACGCAGCACGCGCAAAGGCA
CAACTCCACAGAATATGATCCAGATCTTCCTCCGCCTTCCGACACAGAATACAGCAAAACGGACCAACCAAAGAGGGCATCCTTTTCAACAGACGATCGTAGAGCCTTGC
TTGCTAAATGGCTTTGGCGATTTCGCCTTGAATCCGATTCTTTCTGGGTTAGAAATATCGTGAGTAAACACGGGAAACATCCTTTCATGTGGCTATCGAGTGGGATCAAA
GGCACCTTCAGAAATTCTTGGAAAGACATCTCTCTGGAGCTCCCGTCCTTTTCTTTCTTAGTCCAGTGCATGGTGGGTGATGGGAGAGACATTTACTTCTGGGAGGACAT
TAGGGTGGGGGATCGTTCCCTCTGCTCTATGTTCTCGCGCTTATATCTTTTATCTTCTATGAAAAATCGCACTATGGTTAACATCCTTGGCTCTGCAGAGGAAGATCTTG
ATCATTTGTTGTGGGATTGTTGTTTTGCTCGCTCTGTCTGGAGCTTCTTCTTTGAGGTTTTCGAGTTTCAGACTATTGGCCAGCGTAGGAGCAGGGAGATGATCGAGGAG
TTCCTCCTCCATCCACTGTTTCGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGATGGAGGAGGAACTCCTCAATCATCTCCCTGTGGTCAGCAAAAGATAACCCTTGCAACCCAAAAACCTGACCAAACCGATCCCACGCAGCACGCGCAAAGGCA
CAACTCCACAGAATATGATCCAGATCTTCCTCCGCCTTCCGACACAGAATACAGCAAAACGGACCAACCAAAGAGGGCATCCTTTTCAACAGACGATCGTAGAGCCTTGC
TTGCTAAATGGCTTTGGCGATTTCGCCTTGAATCCGATTCTTTCTGGGTTAGAAATATCGTGAGTAAACACGGGAAACATCCTTTCATGTGGCTATCGAGTGGGATCAAA
GGCACCTTCAGAAATTCTTGGAAAGACATCTCTCTGGAGCTCCCGTCCTTTTCTTTCTTAGTCCAGTGCATGGTGGGTGATGGGAGAGACATTTACTTCTGGGAGGACAT
TAGGGTGGGGGATCGTTCCCTCTGCTCTATGTTCTCGCGCTTATATCTTTTATCTTCTATGAAAAATCGCACTATGGTTAACATCCTTGGCTCTGCAGAGGAAGATCTTG
ATCATTTGTTGTGGGATTGTTGTTTTGCTCGCTCTGTCTGGAGCTTCTTCTTTGAGGTTTTCGAGTTTCAGACTATTGGCCAGCGTAGGAGCAGGGAGATGATCGAGGAG
TTCCTCCTCCATCCACTGTTTCGGTAG
Protein sequenceShow/hide protein sequence
MADGGGTPQSSPCGQQKITLATQKPDQTDPTQHAQRHNSTEYDPDLPPPSDTEYSKTDQPKRASFSTDDRRALLAKWLWRFRLESDSFWVRNIVSKHGKHPFMWLSSGIK
GTFRNSWKDISLELPSFSFLVQCMVGDGRDIYFWEDIRVGDRSLCSMFSRLYLLSSMKNRTMVNILGSAEEDLDHLLWDCCFARSVWSFFFEVFEFQTIGQRRSREMIEE
FLLHPLFR