; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg029432 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg029432
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H
Genome locationscaffold12:36808260..36812093
RNA-Seq ExpressionSpg029432
SyntenySpg029432
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]4.8e-4046.3Show/hide
Query:  DLSSFSIKDLLSLPQEAKSKKLLKEGYSLPTTRKGLGYKSPEPVRITGRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVN
        +  S  I D   L   +  KKLL+EG+S+P +RKGLGYKSPEP+RIT +GK KV D NHIT+EE D++  KE  +QR SVF RIRP VAR +VF+RLS+ 
Subjt:  DLSSFSIKDLLSLPQEAKSKKLLKEGYSLPTTRKGLGYKSPEPVRITGRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVN

Query:  ETEEESTQPTDSSTRPSVFRRLSMPSEEEESTFSTPNVTRPSAFQRLNVPMRKEESTFSAPEVARPSVFQRL----------SVTTRRDKKEQSASSISH
        E E E  Q   S  R SVFRRL+    +EEST      TRPSAF+RL V  +K      AP      +F  L          S    + K+  S   +  
Subjt:  ETEEESTQPTDSSTRPSVFRRLSMPSEEEESTFSTPNVTRPSAFQRLNVPMRKEESTFSAPEVARPSVFQRL----------SVTTRRDKKEQSASSISH

Query:  RLQYEDA--IKNEKI---TKADGEIRSAVPSRMKRKTFVTVDT-DGSLKVRRRDDVV
        R+++ D    +++K    TK +GEI S VPSRMKRKTFVT++T  GSLKV+R D ++
Subjt:  RLQYEDA--IKNEKI---TKADGEIRSAVPSRMKRKTFVTVDT-DGSLKVRRRDDVV

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]5.3e-2337.19Show/hide
Query:  EMKLNLLMKAVDERD-LEIAYLKNQLQSREVAE----LIQFGTLDPVVVRFQKEATMRGPQGKYNSIEDENEGWTLVVRRKKQKQSYARKESRLFRDNKR
        E ++ L ++ V + +  E+  +     SR + E    L+QFGT +P+VV+F +E +   PQG+   IE+++EGW +V  RKK++    ++ESR +++ +R
Subjt:  EMKLNLLMKAVDERD-LEIAYLKNQLQSREVAE----LIQFGTLDPVVVRFQKEATMRGPQGKYNSIEDENEGWTLVVRRKKQKQSYARKESRLFRDNKR

Query:  KAKSQKKKGKKKSRRSKPVMEESEDFFCSPQPITLAEYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPTSSSGTVAVPGDLSSFSIKDLLSLPQEAKS
          K+QK K KKK+ + K V  E  +F    + +TLA++ P+ FL D Q E  E V CH ++  E++ +P  S     V  DLS F+++DLLSLPQE K+
Subjt:  KAKSQKKKGKKKSRRSKPVMEESEDFFCSPQPITLAEYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPTSSSGTVAVPGDLSSFSIKDLLSLPQEAKS

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]1.1e-1253.12Show/hide
Query:  AVASKISKLIEESSKDKVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMEMKLNLLMKAVDERDLEIAYLKNQLQSREVAELIQ
        A+A  I K + ES K  + +K+NPL+      S +     +PDVMSVMMADV  +  MAEME K+NLLMK VDERD EIA LK Q+Q+RE AE  Q
Subjt:  AVASKISKLIEESSKDKVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMEMKLNLLMKAVDERDLEIAYLKNQLQSREVAELIQ

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]4.8e-4046.3Show/hide
Query:  DLSSFSIKDLLSLPQEAKSKKLLKEGYSLPTTRKGLGYKSPEPVRITGRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVN
        +  S  I D   L   +  KKLL+EG+S+P +RKGLGYKSPEP+RIT +GK KV D NHIT+EE D++  KE  +QR SVF RIRP VAR +VF+RLS+ 
Subjt:  DLSSFSIKDLLSLPQEAKSKKLLKEGYSLPTTRKGLGYKSPEPVRITGRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVN

Query:  ETEEESTQPTDSSTRPSVFRRLSMPSEEEESTFSTPNVTRPSAFQRLNVPMRKEESTFSAPEVARPSVFQRL----------SVTTRRDKKEQSASSISH
        E E E  Q   S  R SVFRRL+    +EEST      TRPSAF+RL V  +K      AP      +F  L          S    + K+  S   +  
Subjt:  ETEEESTQPTDSSTRPSVFRRLSMPSEEEESTFSTPNVTRPSAFQRLNVPMRKEESTFSAPEVARPSVFQRL----------SVTTRRDKKEQSASSISH

Query:  RLQYEDA--IKNEKI---TKADGEIRSAVPSRMKRKTFVTVDT-DGSLKVRRRDDVV
        R+++ D    +++K    TK +GEI S VPSRMKRKTFVT++T  GSLKV+R D ++
Subjt:  RLQYEDA--IKNEKI---TKADGEIRSAVPSRMKRKTFVTVDT-DGSLKVRRRDDVV

XP_031737045.1 uncharacterized protein LOC116402134 [Cucumis sativus]1.1e-3945.91Show/hide
Query:  DLSSFSIKDLLSLPQEAKSKKLLKEGYSLPTTRKGLGYKSPEPVRITGRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVN
        +  S  I D   L   +  KKLL+EG+S+P +RKGLGYKSPEP+RIT +GK KV D NHIT+EE D++  KE  +QR SVF RIRP VAR +VF+RLS+ 
Subjt:  DLSSFSIKDLLSLPQEAKSKKLLKEGYSLPTTRKGLGYKSPEPVRITGRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVN

Query:  ETEEESTQPTDSSTRPSVFRRLSMPSEEEESTFSTPNVTRPSAFQRLNVPMRKEESTFSAPEVARPSVFQRL----------SVTTRRDKKEQSASSISH
        E E E  Q   +  R SVFRRL+    +EEST      TRPSAF+RL V  +K      AP      +F  L          S    + K+  S   +  
Subjt:  ETEEESTQPTDSSTRPSVFRRLSMPSEEEESTFSTPNVTRPSAFQRLNVPMRKEESTFSAPEVARPSVFQRL----------SVTTRRDKKEQSASSISH

Query:  RLQYEDA--IKNEKI---TKADGEIRSAVPSRMKRKTFVTVDT-DGSLKVRRRDDVV
        R+++ D    +++K    TK +GEI S VPSRMKRKTFVT++T  GSLKV+R D ++
Subjt:  RLQYEDA--IKNEKI---TKADGEIRSAVPSRMKRKTFVTVDT-DGSLKVRRRDDVV

XP_031737045.1 uncharacterized protein LOC116402134 [Cucumis sativus]6.5e-0543.24Show/hide
Query:  FCSPQP-ITLAEYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPTSSSGTVAVPGDLSSFSIKDLLSLPQEAKS
        F  PQ  +TLA++ P+ FL   Q E  E V CH ++  E++ +P  S     V  DLS F+++DLLSLPQE K+
Subjt:  FCSPQP-ITLAEYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPTSSSGTVAVPGDLSSFSIKDLLSLPQEAKS

XP_031737045.1 uncharacterized protein LOC116402134 [Cucumis sativus]1.1e-3945.91Show/hide
Query:  DLSSFSIKDLLSLPQEAKSKKLLKEGYSLPTTRKGLGYKSPEPVRITGRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVN
        +  S  I D   L   +  KKLL+EG+S+P +RKGLGYKSPEP+RIT +GK KV D NHIT+EE D++  KE  +QR SVF RIRP VAR +VF+RLS+ 
Subjt:  DLSSFSIKDLLSLPQEAKSKKLLKEGYSLPTTRKGLGYKSPEPVRITGRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVN

Query:  ETEEESTQPTDSSTRPSVFRRLSMPSEEEESTFSTPNVTRPSAFQRLNVPMRKEESTFSAPEVARPSVFQRL----------SVTTRRDKKEQSASSISH
        E E E  Q   +  R SVFRRL+    +EEST      TRPSAF+RL V  +K      AP      +F  L          S    + K+  S   +  
Subjt:  ETEEESTQPTDSSTRPSVFRRLSMPSEEEESTFSTPNVTRPSAFQRLNVPMRKEESTFSAPEVARPSVFQRL----------SVTTRRDKKEQSASSISH

Query:  RLQYEDA--IKNEKI---TKADGEIRSAVPSRMKRKTFVTVDT-DGSLKVRRRDDVV
        R+++ D    +++K    TK +GEI S VPSRMKRKTFVT++T  GSLKV+R D ++
Subjt:  RLQYEDA--IKNEKI---TKADGEIRSAVPSRMKRKTFVTVDT-DGSLKVRRRDDVV

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]5.3e-2337.19Show/hide
Query:  EMKLNLLMKAVDERD-LEIAYLKNQLQSREVAE----LIQFGTLDPVVVRFQKEATMRGPQGKYNSIEDENEGWTLVVRRKKQKQSYARKESRLFRDNKR
        E ++ L ++ V + +  E+  +     SR + E    L+QFGT +P+VV+F +E +   PQG+   IE+++EGW +V  RKK++    ++ESR +++ +R
Subjt:  EMKLNLLMKAVDERD-LEIAYLKNQLQSREVAE----LIQFGTLDPVVVRFQKEATMRGPQGKYNSIEDENEGWTLVVRRKKQKQSYARKESRLFRDNKR

Query:  KAKSQKKKGKKKSRRSKPVMEESEDFFCSPQPITLAEYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPTSSSGTVAVPGDLSSFSIKDLLSLPQEAKS
          K+QK K KKK+ + K V  E  +F    + +TLA++ P+ FL D Q E  E V CH ++  E++ +P  S     V  DLS F+++DLLSLPQE K+
Subjt:  KAKSQKKKGKKKSRRSKPVMEESEDFFCSPQPITLAEYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPTSSSGTVAVPGDLSSFSIKDLLSLPQEAKS

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]1.1e-1253.12Show/hide
Query:  AVASKISKLIEESSKDKVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMEMKLNLLMKAVDERDLEIAYLKNQLQSREVAELIQ
        A+A  I K + ES K  + +K+NPL+      S +     +PDVMSVMMADV  +  MAEME K+NLLMK VDERD EIA LK Q+Q+RE AE  Q
Subjt:  AVASKISKLIEESSKDKVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMEMKLNLLMKAVDERDLEIAYLKNQLQSREVAELIQ

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]1.1e-3945.91Show/hide
Query:  DLSSFSIKDLLSLPQEAKSKKLLKEGYSLPTTRKGLGYKSPEPVRITGRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVN
        +  S  I D   L   +  KKLL+EG+S+P +RKGLGYKSPEP+RIT +GK KV D NHIT+EE D++  KE  +QR SVF RIRP VAR +VF+RLS+ 
Subjt:  DLSSFSIKDLLSLPQEAKSKKLLKEGYSLPTTRKGLGYKSPEPVRITGRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVN

Query:  ETEEESTQPTDSSTRPSVFRRLSMPSEEEESTFSTPNVTRPSAFQRLNVPMRKEESTFSAPEVARPSVFQRL----------SVTTRRDKKEQSASSISH
        E E E  Q   +  R SVFRRL+    +EEST      TRPSAF+RL V  +K      AP      +F  L          S    + K+  S   +  
Subjt:  ETEEESTQPTDSSTRPSVFRRLSMPSEEEESTFSTPNVTRPSAFQRLNVPMRKEESTFSAPEVARPSVFQRL----------SVTTRRDKKEQSASSISH

Query:  RLQYEDA--IKNEKI---TKADGEIRSAVPSRMKRKTFVTVDT-DGSLKVRRRDDVV
        R+++ D    +++K    TK +GEI S VPSRMKRKTFVT++T  GSLKV+R D ++
Subjt:  RLQYEDA--IKNEKI---TKADGEIRSAVPSRMKRKTFVTVDT-DGSLKVRRRDDVV

XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]5.3e-2337.19Show/hide
Query:  EMKLNLLMKAVDERD-LEIAYLKNQLQSREVAE----LIQFGTLDPVVVRFQKEATMRGPQGKYNSIEDENEGWTLVVRRKKQKQSYARKESRLFRDNKR
        E ++ L ++ V + +  E+  +     SR + E    L+QFGT +P+VV+F +E +   PQG+   IE+++EGW +V  RKK++    ++ESR +++ +R
Subjt:  EMKLNLLMKAVDERD-LEIAYLKNQLQSREVAE----LIQFGTLDPVVVRFQKEATMRGPQGKYNSIEDENEGWTLVVRRKKQKQSYARKESRLFRDNKR

Query:  KAKSQKKKGKKKSRRSKPVMEESEDFFCSPQPITLAEYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPTSSSGTVAVPGDLSSFSIKDLLSLPQEAKS
          K+QK K KKK+ + K V  E  +F    + +TLA++ P+ FL D Q E  E V CH ++  E++ +P  S     V  DLS F+++DLLSLPQE K+
Subjt:  KAKSQKKKGKKKSRRSKPVMEESEDFFCSPQPITLAEYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPTSSSGTVAVPGDLSSFSIKDLLSLPQEAKS

XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]1.1e-1253.12Show/hide
Query:  AVASKISKLIEESSKDKVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMEMKLNLLMKAVDERDLEIAYLKNQLQSREVAELIQ
        A+A  I K + ES K  + +K+NPL+      S +     +PDVMSVMMADV  +  MAEME K+NLLMK VDERD EIA LK Q+Q+RE AE  Q
Subjt:  AVASKISKLIEESSKDKVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMEMKLNLLMKAVDERDLEIAYLKNQLQSREVAELIQ

TrEMBL top hitse value%identityAlignment
A0A5A7TZU9 Ribonuclease H2.3e-3246.85Show/hide
Query:  KKLLKEGYSLPTTRKGLGYKSPEPVRITGRGKAKVADTNHITVEEVDDSKEKESV-DQRTSVFRRIRPPVARALVFQRLSVNETEEESTQPTDSSTRPSV
        KKL K+GYS+P +R G+GY+S EPVRITG+GKAKVA+T HITVEE  DS+E + V  QR+SVF RI                           S+ RPSV
Subjt:  KKLLKEGYSLPTTRKGLGYKSPEPVRITGRGKAKVADTNHITVEEVDDSKEKESV-DQRTSVFRRIRPPVARALVFQRLSVNETEEESTQPTDSSTRPSV

Query:  FRRLSMPSEEEESTFSTPNVTRPSAFQRLNVPMRKEESTFSAPEVARPSVFQRLSVTTRRDKKEQSASSISHRLQYEDAIKNEKITKADGEIRSAVPSRM
        F+R+S    ++ +  ST + TR SAFQRLN   +K  S    P   R S F+RLSV+  RD+K+ S  S+S++           +   D EIRSA PSRM
Subjt:  FRRLSMPSEEEESTFSTPNVTRPSAFQRLNVPMRKEESTFSAPEVARPSVFQRLSVTTRRDKKEQSASSISHRLQYEDAIKNEKITKADGEIRSAVPSRM

Query:  KRKTFVTVDTDGSLKVRRRDDV
        KRK FV+V+T+GSLKV+R D V
Subjt:  KRKTFVTVDTDGSLKVRRRDDV

A0A5A7TZU9 Ribonuclease H1.9e-1833Show/hide
Query:  MEMKLNLLMKAVDERDLEIAYLKNQLQSREVAELIQFGTLDPVVVRFQKEATMR------GPQGKYNSIEDENEGWTLVVRRKKQKQSYARKESRLFRDN
        ++ K+ L +  V + +     +++  +   +  LIQFG+L+PVV+    E          GP+ +   +++  EGWTLV RRKK+KQS+++KES  +R  
Subjt:  MEMKLNLLMKAVDERDLEIAYLKNQLQSREVAELIQFGTLDPVVVRFQKEATMR------GPQGKYNSIEDENEGWTLVVRRKKQKQSYARKESRLFRDN

Query:  KRKAKSQKKKGKKKSRRSKPVMEESEDFFCSPQPITLAEYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPTSSSGTVAVPGDLSSFSIKDLLSLPQEAK
        + K KSQ++  +K  R+  P++EESE      +PI L ++FP+ F        +E V+CH     E+D  P+++      P DL    I DLL+L +E K
Subjt:  KRKAKSQKKKGKKKSRRSKPVMEESEDFFCSPQPITLAEYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPTSSSGTVAVPGDLSSFSIKDLLSLPQEAK

A0A5D3BSG5 Uncharacterized protein1.3e-3524.48Show/hide
Query:  EMKLNLLMKAVDERDLEIAYLKNQ-LQSREVAE----LIQFGTLDPVVVRFQKEATMRGPQGKYNSIEDENEGWTLVVRRKKQKQSYARKESRLFRDNKR
        E K+ L ++ V + +   A + ++ L  R + E    L+QFGT +PVVVRF +E      Q K   IE+++EGWT+V RRKK+K +  +KE R +R+ ++
Subjt:  EMKLNLLMKAVDERDLEIAYLKNQ-LQSREVAE----LIQFGTLDPVVVRFQKEATMRGPQGKYNSIEDENEGWTLVVRRKKQKQSYARKESRLFRDNKR

Query:  KAKSQKKKGKKKSRRSKPVMEESEDFFCSPQPITLAEYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPTSSSGTVAVPGDLSSFSIKDLLSLPQEAK--
          K+QK K KKK+R+ K + EE +DF  + + +TLA++FP RFL D Q E    V CH ++ +E++++P  S     V  DLS F++ DLLSLPQE K  
Subjt:  KAKSQKKKGKKKSRRSKPVMEESEDFFCSPQPITLAEYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPTSSSGTVAVPGDLSSFSIKDLLSLPQEAK--

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------------------------SKKLLKEGYSLPTTRKGLGYKSPEPVRITGRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPP
                                        KKLL+EG+ +P +RKGLGYKSPEP+RIT +GK KV D+NHITV+EVD  +E E   QRTS F RI P 
Subjt:  -------------------------------SKKLLKEGYSLPTTRKGLGYKSPEPVRITGRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPP

Query:  VARALVFQRLSVNETEEESTQPTDSSTRPSVFRRLSMPSEEEESTFSTPNVTRPSAFQRLNVPMRKEESTFSAPEVAR-PSVFQRLSVTTRRDKKEQSAS
        VAR  VF+RLS+ E E +  Q T +  R SVF+RL++  +EE+    T   T+PSAF+RL++  +K   T  AP + R       + + +  D K++ ++
Subjt:  VARALVFQRLSVNETEEESTQPTDSSTRPSVFRRLSMPSEEEESTFSTPNVTRPSAFQRLNVPMRKEESTFSAPEVAR-PSVFQRLSVTTRRDKKEQSAS

Query:  SISHRLQYEDAIKNEKI-----------TKADGEIRSAVPSRMKRKTFVTVDT----------DGSLKVRRRDDVV
        S   R+     IK+ K+            K + EIRS VPSR KRKTFVT++T           GSLKV+R D ++
Subjt:  SISHRLQYEDAIKNEKI-----------TKADGEIRSAVPSRMKRKTFVTVDT----------DGSLKVRRRDDVV

A0A5D3C0W6 Ty3-gypsy retrotransposon protein4.7e-3325.39Show/hide
Query:  ELIQFGTLDPVVVRFQKEATMRGPQGKYNSIEDENEGWTLVVRRKKQKQSYARKESRLFRDNKRKAKSQKKKGKKKSRRSKPVMEESEDFFCSPQPITLA
        +L +FGT +PVVVRF +E      Q K   IE+++E WT+V RRKK+K +  +KE R +R+ +R  K+QK K KKK+R+ K + +E +DF  + + ITLA
Subjt:  ELIQFGTLDPVVVRFQKEATMRGPQGKYNSIEDENEGWTLVVRRKKQKQSYARKESRLFRDNKRKAKSQKKKGKKKSRRSKPVMEESEDFFCSPQPITLA

Query:  EYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPTSSSGTVAVPGDLSSFSIKDLLSLPQEAKS-------------------------------------
        ++FP RFL D Q E    V CH ++  E++ +P  S     V  DLS F++ DLLSLPQE K+                                     
Subjt:  EYFPRRFLDDSQGEALETVTCHIVDVVEDDDVPTSSSGTVAVPGDLSSFSIKDLLSLPQEAKS-------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------------------------------------KKLLKEGYSLPTTRKGLGYKSPEPVRITGRGKAKVAD
                                                                       KKLL+EG+++P +RKGLGYK PEP+RIT +GK K+ D
Subjt:  ---------------------------------------------------------------KKLLKEGYSLPTTRKGLGYKSPEPVRITGRGKAKVAD

Query:  TNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVNETEEESTQPTDSSTRPSVFRRLSMPSEEEESTFSTPNVTRPS-----AFQRLNVPM
        +NHITV+EVD  KEKE   QRTS F RI P VARA VF+RLSV E E +  Q T +  R S F RLS+  ++   T   P + R            ++ +
Subjt:  TNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVNETEEESTQPTDSSTRPSVFRRLSMPSEEEESTFSTPNVTRPS-----AFQRLNVPM

Query:  RKEESTFSAPEVARPSVFQRLSVTTRRDKKEQSASSISHRLQYEDAIKNEKITKADGEIRSAVPSRMKRKTFVTVD-TDGSLKVRRRDDVV---------
        +K+EST      +R SV+ R+        K  +  S  H  ++   +K E+      EI S VPSRMKRKTFVT++ + GSLKV+R D ++         
Subjt:  RKEESTFSAPEVARPSVFQRLSVTTRRDKKEQSASSISHRLQYEDAIKNEKITKADGEIRSAVPSRMKRKTFVTVD-TDGSLKVRRRDDVV---------

Query:  -EGEILTNH
         EGEI  +H
Subjt:  -EGEILTNH

A0A5D3DB95 RNase H domain-containing protein8.5e-3544.17Show/hide
Query:  TRKGLGYKSPEPVRITGRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVNETEEESTQPTDSSTRPSVFRRLSMPSEEEES
        +RKGL YKSPEP+RIT +GK KV D+NHITV+EVD  +EKE   QRTS F RI P VARA VF+RLS+ E E +  Q T +  R S F+RL++  +EE+ 
Subjt:  TRKGLGYKSPEPVRITGRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVNETEEESTQPTDSSTRPSVFRRLSMPSEEEES

Query:  TFSTPNVTRPSAFQRLNVPMRKEESTFSAPEVARPS-----VFQRLSVTTRRDKKEQSASSISHRLQYEDAIKNEK-----ITKADGEIRSAVPSRMKRK
         +     T+PSAF+RL++  +K   T  AP + R       V    S+ T++ K+  S+ S+ HR+++ D             K + EI S VP RMKRK
Subjt:  TFSTPNVTRPSAFQRLNVPMRKEESTFSAPEVARPS-----VFQRLSVTTRRDKKEQSASSISHRLQYEDAIKNEK-----ITKADGEIRSAVPSRMKRK

Query:  TFVTVDT-DGSLKVRRRDDVV-----------EGEILTNH
        TFVT++T  GSLKV+R D ++           EGEI  +H
Subjt:  TFVTVDT-DGSLKVRRRDDVV-----------EGEILTNH

A0A5D3DXC7 Reverse transcriptase domain-containing protein3.3e-3945.49Show/hide
Query:  DLSSFSIKDLLSLPQEAKSKKLLKEGYSLPTTRKGLGYKSPEPVRITGRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVN
        D  S  I +   L   +  KKLL+EG+ +P +RKGLGYKSPEP+RIT +GK KV D+NHITV+EVD  +EKE  +QRTS F RI P VARA VF+RLS+ 
Subjt:  DLSSFSIKDLLSLPQEAKSKKLLKEGYSLPTTRKGLGYKSPEPVRITGRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVN

Query:  ETEEESTQPTDSSTRPSVFRRLSMPSEEEESTFSTPNVTRPSAFQRLNVPMRKEESTFSAPEVARPS-----VFQRLSVTTRRDKKEQSASSISHRLQYE
        E E +  Q T +  + S F+RL++  +EE+    T   T+PSAF+RL++  +K   T  AP + R       V    S+ T++ K+  S   + HR+++ 
Subjt:  ETEEESTQPTDSSTRPSVFRRLSMPSEEEESTFSTPNVTRPSAFQRLNVPMRKEESTFSAPEVARPS-----VFQRLSVTTRRDKKEQSASSISHRLQYE

Query:  DAIKNEK--------ITKADGEIRSAVPSRMKRKTFVTVDT-DGSLKVRRRDDVV
          IK E           K + EIRS VPSRMKRKTFVT++T  GSLKV+R D ++
Subjt:  DAIKNEK--------ITKADGEIRSAVPSRMKRKTFVTVDT-DGSLKVRRRDDVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTGAGATCAAGGAGGATCATACTCCTCTGGCTGTTGCAAGCAAGATCTCAAAGTTGATTGAAGAATCCTCTAAGGATAAGGTTGCAGTCAAAGACAACCCACTGTTCGA
ATCTGTCGTTCCAACATCAAAGCAGCCAAAGGATACACTAAATCCTGATGTGATGTCCGTCATGATGGCTGATGTAGACCAAGATGAAAGAATGGCAGAGATGGAAATGA
AACTCAATCTCTTAATGAAGGCAGTTGATGAGAGAGATCTTGAGATTGCCTATTTGAAGAACCAACTGCAGAGCCGAGAAGTGGCTGAATTAATTCAATTTGGGACCCTT
GATCCTGTAGTGGTTCGATTTCAAAAAGAAGCCACAATGAGGGGGCCCCAAGGAAAATATAATTCCATTGAAGATGAGAACGAAGGCTGGACCCTTGTCGTTCGTCGCAA
AAAGCAAAAGCAAAGTTACGCACGGAAAGAGTCCCGCCTATTTCGAGACAATAAAAGAAAGGCTAAGTCTCAAAAGAAGAAAGGAAAAAAGAAGTCAAGGAGGTCAAAGC
CTGTCATGGAGGAAAGTGAAGATTTCTTTTGTTCTCCACAACCCATAACTTTGGCAGAATACTTCCCAAGGCGCTTTCTCGATGATAGTCAAGGAGAGGCACTTGAAACT
GTCACGTGTCACATTGTGGACGTGGTGGAAGATGATGATGTCCCTACTAGTTCCTCGGGAACGGTGGCAGTTCCAGGAGACTTATCCTCCTTCAGCATAAAGGACTTACT
ATCACTTCCTCAGGAAGCTAAAAGCAAGAAACTTCTAAAGGAAGGCTATAGTCTGCCTACAACAAGAAAAGGGCTCGGATATAAGTCGCCAGAGCCGGTTCGCATAACAG
GAAGAGGGAAGGCAAAAGTGGCAGACACAAATCATATAACAGTAGAGGAGGTTGATGACTCAAAAGAAAAAGAGAGTGTCGACCAACGAACTTCTGTTTTTAGGCGCATC
AGGCCACCGGTTGCTCGTGCTTTAGTCTTTCAGAGATTAAGTGTCAATGAAACGGAAGAAGAGAGTACACAACCTACCGATAGCTCCACTCGACCTTCAGTTTTTCGAAG
GTTAAGTATGCCCAGTGAGGAAGAAGAGAGTACATTTTCAACTCCGAATGTCACTCGACCTTCAGCTTTTCAAAGATTAAATGTGCCCATGAGGAAAGAAGAGAGTACAT
TTTCAGCTCCGGAGGTGGCTCGACCATCAGTTTTTCAAAGGTTAAGTGTTACTACGAGAAGAGACAAAAAAGAACAGTCTGCTTCATCGATATCTCACCGACTTCAATAT
GAAGATGCGATAAAAAATGAAAAGATCACGAAGGCCGATGGAGAAATTCGTAGTGCAGTTCCGTCACGAATGAAAAGGAAAACCTTTGTTACTGTCGATACGGATGGTTC
CTTGAAGGTAAGGCGACGTGATGATGTTGTTGAAGGAGAAATTTTGACCAATCACAAATTGCCACGTCATTACACGAAATTAATGACGAAATTATAA
mRNA sequenceShow/hide mRNA sequence
ATTGAGATCAAGGAGGATCATACTCCTCTGGCTGTTGCAAGCAAGATCTCAAAGTTGATTGAAGAATCCTCTAAGGATAAGGTTGCAGTCAAAGACAACCCACTGTTCGA
ATCTGTCGTTCCAACATCAAAGCAGCCAAAGGATACACTAAATCCTGATGTGATGTCCGTCATGATGGCTGATGTAGACCAAGATGAAAGAATGGCAGAGATGGAAATGA
AACTCAATCTCTTAATGAAGGCAGTTGATGAGAGAGATCTTGAGATTGCCTATTTGAAGAACCAACTGCAGAGCCGAGAAGTGGCTGAATTAATTCAATTTGGGACCCTT
GATCCTGTAGTGGTTCGATTTCAAAAAGAAGCCACAATGAGGGGGCCCCAAGGAAAATATAATTCCATTGAAGATGAGAACGAAGGCTGGACCCTTGTCGTTCGTCGCAA
AAAGCAAAAGCAAAGTTACGCACGGAAAGAGTCCCGCCTATTTCGAGACAATAAAAGAAAGGCTAAGTCTCAAAAGAAGAAAGGAAAAAAGAAGTCAAGGAGGTCAAAGC
CTGTCATGGAGGAAAGTGAAGATTTCTTTTGTTCTCCACAACCCATAACTTTGGCAGAATACTTCCCAAGGCGCTTTCTCGATGATAGTCAAGGAGAGGCACTTGAAACT
GTCACGTGTCACATTGTGGACGTGGTGGAAGATGATGATGTCCCTACTAGTTCCTCGGGAACGGTGGCAGTTCCAGGAGACTTATCCTCCTTCAGCATAAAGGACTTACT
ATCACTTCCTCAGGAAGCTAAAAGCAAGAAACTTCTAAAGGAAGGCTATAGTCTGCCTACAACAAGAAAAGGGCTCGGATATAAGTCGCCAGAGCCGGTTCGCATAACAG
GAAGAGGGAAGGCAAAAGTGGCAGACACAAATCATATAACAGTAGAGGAGGTTGATGACTCAAAAGAAAAAGAGAGTGTCGACCAACGAACTTCTGTTTTTAGGCGCATC
AGGCCACCGGTTGCTCGTGCTTTAGTCTTTCAGAGATTAAGTGTCAATGAAACGGAAGAAGAGAGTACACAACCTACCGATAGCTCCACTCGACCTTCAGTTTTTCGAAG
GTTAAGTATGCCCAGTGAGGAAGAAGAGAGTACATTTTCAACTCCGAATGTCACTCGACCTTCAGCTTTTCAAAGATTAAATGTGCCCATGAGGAAAGAAGAGAGTACAT
TTTCAGCTCCGGAGGTGGCTCGACCATCAGTTTTTCAAAGGTTAAGTGTTACTACGAGAAGAGACAAAAAAGAACAGTCTGCTTCATCGATATCTCACCGACTTCAATAT
GAAGATGCGATAAAAAATGAAAAGATCACGAAGGCCGATGGAGAAATTCGTAGTGCAGTTCCGTCACGAATGAAAAGGAAAACCTTTGTTACTGTCGATACGGATGGTTC
CTTGAAGGTAAGGCGACGTGATGATGTTGTTGAAGGAGAAATTTTGACCAATCACAAATTGCCACGTCATTACACGAAATTAATGACGAAATTATAA
Protein sequenceShow/hide protein sequence
IEIKEDHTPLAVASKISKLIEESSKDKVAVKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEMEMKLNLLMKAVDERDLEIAYLKNQLQSREVAELIQFGTL
DPVVVRFQKEATMRGPQGKYNSIEDENEGWTLVVRRKKQKQSYARKESRLFRDNKRKAKSQKKKGKKKSRRSKPVMEESEDFFCSPQPITLAEYFPRRFLDDSQGEALET
VTCHIVDVVEDDDVPTSSSGTVAVPGDLSSFSIKDLLSLPQEAKSKKLLKEGYSLPTTRKGLGYKSPEPVRITGRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRI
RPPVARALVFQRLSVNETEEESTQPTDSSTRPSVFRRLSMPSEEEESTFSTPNVTRPSAFQRLNVPMRKEESTFSAPEVARPSVFQRLSVTTRRDKKEQSASSISHRLQY
EDAIKNEKITKADGEIRSAVPSRMKRKTFVTVDTDGSLKVRRRDDVVEGEILTNHKLPRHYTKLMTKL