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Spg029456 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg029456
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionMitochondrial import inner membrane translocase subunit
Genome locationscaffold12:34142835..34148152
RNA-Seq ExpressionSpg029456
SyntenySpg029456
Gene Ontology termsGO:0005758 - mitochondrial intermembrane space (cellular component)
InterPro domainsIPR004217 - Tim10-like
IPR035427 - Tim10-like domain superfamily
IPR039238 - Mitochondrial import inner membrane translocase subunit Tim8/13


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017060.1 Mitochondrial import inner membrane translocase subunit TIM13, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-3162.5Show/hide
Query:  MDSFSSPSSGSSSQFSATEFRDQLKTQLAQAYAEEFLELKQAKVALADRLAKINVRKVVIVGIYICNLEVRQLAIRQGTSRGTEGANHPCRPQYPTLRAK
        MDSFSSPSSGSSSQFS  EFRDQLKTQLAQAYAEEFLE+ Q +V L   L+ +N+ K  ++                             R    TLR K
Subjt:  MDSFSSPSSGSSSQFSATEFRDQLKTQLAQAYAEEFLELKQAKVALADRLAKINVRKVVIVGIYICNLEVRQLAIRQGTSRGTEGANHPCRPQYPTLRAK

Query:  CFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
        CFDKCITKPGSSLSGSESSCISRCMERYIEAT IVSRALFKTPH
Subjt:  CFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH

XP_004145880.1 mitochondrial import inner membrane translocase subunit Tim13 [Cucumis sativus]2.6e-2858.33Show/hide
Query:  MDSFSSPSSGSSSQFSATEFRDQLKTQLAQAYAEEFLELKQAKVALADRLAKINVRKVVIVGIYICNLEVRQLAIRQGTSRGTEGANHPCRPQYPTLRAK
        MDSFSSPSSGSS QFSA EFRDQLKTQLAQAYAEEFLE                                                         TLR K
Subjt:  MDSFSSPSSGSSSQFSATEFRDQLKTQLAQAYAEEFLELKQAKVALADRLAKINVRKVVIVGIYICNLEVRQLAIRQGTSRGTEGANHPCRPQYPTLRAK

Query:  CFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
        CFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
Subjt:  CFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH

XP_022159838.1 mitochondrial import inner membrane translocase subunit Tim13 [Momordica charantia]2.2e-2756.94Show/hide
Query:  MDSFSSPSSGSSSQFSATEFRDQLKTQLAQAYAEEFLELKQAKVALADRLAKINVRKVVIVGIYICNLEVRQLAIRQGTSRGTEGANHPCRPQYPTLRAK
        MDSFSSPSSG SSQFSA EF+DQLKTQLAQAYAEEFLE                                                         TLR K
Subjt:  MDSFSSPSSGSSSQFSATEFRDQLKTQLAQAYAEEFLELKQAKVALADRLAKINVRKVVIVGIYICNLEVRQLAIRQGTSRGTEGANHPCRPQYPTLRAK

Query:  CFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
        CFDKCITKPGSSLSGSESSCISRCMERYIEATSIVS+ALFKTPH
Subjt:  CFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH

XP_022929052.1 mitochondrial import inner membrane translocase subunit TIM13-like isoform X6 [Cucurbita moschata]7.7e-2857.64Show/hide
Query:  MDSFSSPSSGSSSQFSATEFRDQLKTQLAQAYAEEFLELKQAKVALADRLAKINVRKVVIVGIYICNLEVRQLAIRQGTSRGTEGANHPCRPQYPTLRAK
        MDSFSSPSSGSSSQFS  EFRDQLKTQLAQAYAEEFLE                                                         TLR K
Subjt:  MDSFSSPSSGSSSQFSATEFRDQLKTQLAQAYAEEFLELKQAKVALADRLAKINVRKVVIVGIYICNLEVRQLAIRQGTSRGTEGANHPCRPQYPTLRAK

Query:  CFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
        CFDKCITKPGSSLSGSESSCISRCMERYIEAT IVSRALFKTPH
Subjt:  CFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH

XP_038906948.1 mitochondrial import inner membrane translocase subunit TIM13 [Benincasa hispida]6.9e-2959.03Show/hide
Query:  MDSFSSPSSGSSSQFSATEFRDQLKTQLAQAYAEEFLELKQAKVALADRLAKINVRKVVIVGIYICNLEVRQLAIRQGTSRGTEGANHPCRPQYPTLRAK
        MDSFSSPSSGSSSQFSA EFRDQLKTQLAQAYAEEFLE                                                         TLR K
Subjt:  MDSFSSPSSGSSSQFSATEFRDQLKTQLAQAYAEEFLELKQAKVALADRLAKINVRKVVIVGIYICNLEVRQLAIRQGTSRGTEGANHPCRPQYPTLRAK

Query:  CFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
        CFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
Subjt:  CFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH

TrEMBL top hitse value%identityAlignment
A0A0A0KK66 Mitochondrial import inner membrane translocase subunit1.3e-2858.33Show/hide
Query:  MDSFSSPSSGSSSQFSATEFRDQLKTQLAQAYAEEFLELKQAKVALADRLAKINVRKVVIVGIYICNLEVRQLAIRQGTSRGTEGANHPCRPQYPTLRAK
        MDSFSSPSSGSS QFSA EFRDQLKTQLAQAYAEEFLE                                                         TLR K
Subjt:  MDSFSSPSSGSSSQFSATEFRDQLKTQLAQAYAEEFLELKQAKVALADRLAKINVRKVVIVGIYICNLEVRQLAIRQGTSRGTEGANHPCRPQYPTLRAK

Query:  CFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
        CFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
Subjt:  CFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH

A0A1S3AUN2 Mitochondrial import inner membrane translocase subunit1.3e-2858.33Show/hide
Query:  MDSFSSPSSGSSSQFSATEFRDQLKTQLAQAYAEEFLELKQAKVALADRLAKINVRKVVIVGIYICNLEVRQLAIRQGTSRGTEGANHPCRPQYPTLRAK
        MDSFSSPSSGSS QFSA EFRDQLKTQLAQAYAEEFLE                                                         TLR K
Subjt:  MDSFSSPSSGSSSQFSATEFRDQLKTQLAQAYAEEFLELKQAKVALADRLAKINVRKVVIVGIYICNLEVRQLAIRQGTSRGTEGANHPCRPQYPTLRAK

Query:  CFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
        CFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
Subjt:  CFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH

A0A6J1DZZ6 Mitochondrial import inner membrane translocase subunit1.1e-2756.94Show/hide
Query:  MDSFSSPSSGSSSQFSATEFRDQLKTQLAQAYAEEFLELKQAKVALADRLAKINVRKVVIVGIYICNLEVRQLAIRQGTSRGTEGANHPCRPQYPTLRAK
        MDSFSSPSSG SSQFSA EF+DQLKTQLAQAYAEEFLE                                                         TLR K
Subjt:  MDSFSSPSSGSSSQFSATEFRDQLKTQLAQAYAEEFLELKQAKVALADRLAKINVRKVVIVGIYICNLEVRQLAIRQGTSRGTEGANHPCRPQYPTLRAK

Query:  CFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
        CFDKCITKPGSSLSGSESSCISRCMERYIEATSIVS+ALFKTPH
Subjt:  CFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH

A0A6J1ELP2 Mitochondrial import inner membrane translocase subunit3.7e-2857.64Show/hide
Query:  MDSFSSPSSGSSSQFSATEFRDQLKTQLAQAYAEEFLELKQAKVALADRLAKINVRKVVIVGIYICNLEVRQLAIRQGTSRGTEGANHPCRPQYPTLRAK
        MDSFSSPSSGSSSQFS  EFRDQLKTQLAQAYAEEFLE                                                         TLR K
Subjt:  MDSFSSPSSGSSSQFSATEFRDQLKTQLAQAYAEEFLELKQAKVALADRLAKINVRKVVIVGIYICNLEVRQLAIRQGTSRGTEGANHPCRPQYPTLRAK

Query:  CFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
        CFDKCITKPGSSLSGSESSCISRCMERYIEAT IVSRALFKTPH
Subjt:  CFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH

A0A6J1I4K9 Mitochondrial import inner membrane translocase subunit3.7e-2857.64Show/hide
Query:  MDSFSSPSSGSSSQFSATEFRDQLKTQLAQAYAEEFLELKQAKVALADRLAKINVRKVVIVGIYICNLEVRQLAIRQGTSRGTEGANHPCRPQYPTLRAK
        MDSFSSPSSGSSSQFS  EFRDQLKTQLAQAYAEEFLE                                                         TLR K
Subjt:  MDSFSSPSSGSSSQFSATEFRDQLKTQLAQAYAEEFLELKQAKVALADRLAKINVRKVVIVGIYICNLEVRQLAIRQGTSRGTEGANHPCRPQYPTLRAK

Query:  CFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH
        CFDKCITKPGSSLSGSESSCISRCMERYIEAT IVSRALFKTPH
Subjt:  CFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKTPH

SwissProt top hitse value%identityAlignment
Q10481 Mitochondrial import inner membrane translocase subunit tim132.0e-0756.1Show/hide
Query:  LRAKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSR
        +   CFDKCI +PGS+   +E SC+S+CMERY++A +IVSR
Subjt:  LRAKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSR

Q4PGT2 Mitochondrial import inner membrane translocase subunit TIM137.0e-0846.97Show/hide
Query:  RQLAIRQGTSRGTEGANHPCRPQYPTLRAKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVS
        R+ AI+Q  S     AN   +        KC+ KCI  PG+SLSG E +C++RCMERY EA +IVS
Subjt:  RQLAIRQGTSRGTEGANHPCRPQYPTLRAKCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVS

Q8AVK1 Mitochondrial import inner membrane translocase subunit Tim13-B4.6e-0761.54Show/hide
Query:  KCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRA
        KCF KCI KPG SL  SE  C++ CM+RY++A +IVSRA
Subjt:  KCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRA

Q9XGY5 Mitochondrial import inner membrane translocase subunit Tim132.7e-1543.66Show/hide
Query:  MDSFSSPSSGSSSQFSATEFRDQLKTQLAQAYAEEFLELKQAKVALADRLAKINVRKVVIVGIYICNLEVRQLAIRQGTSRGTEGANHPCRPQYPTLRAK
        MDSFSS SSGS     A    DQ+K QLAQAYA+EFLE                                                         T+  K
Subjt:  MDSFSSPSSGSSSQFSATEFRDQLKTQLAQAYAEEFLELKQAKVALADRLAKINVRKVVIVGIYICNLEVRQLAIRQGTSRGTEGANHPCRPQYPTLRAK

Query:  CFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKT
        CF KC+TKPGSSLSGSESSCISRC++RYIEAT IVSRALF +
Subjt:  CFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALFKT

Q9XH48 Mitochondrial import inner membrane translocase subunit TIM131.1e-1641.84Show/hide
Query:  MDSFSS-PSSGSSSQFSATEFRDQLKTQLAQAYAEEFLELKQAKVALADRLAKINVRKVVIVGIYICNLEVRQLAIRQGTSRGTEGANHPCRPQYPTLRA
        MDS+SS P  GS S  S     + +KTQLAQAYAEE +E                                                         TLR 
Subjt:  MDSFSS-PSSGSSSQFSATEFRDQLKTQLAQAYAEEFLELKQAKVALADRLAKINVRKVVIVGIYICNLEVRQLAIRQGTSRGTEGANHPCRPQYPTLRA

Query:  KCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALF
        KCFDKC+TKPGSSL GSESSCISRC+ERY+EAT+I+SR+LF
Subjt:  KCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALF

Arabidopsis top hitse value%identityAlignment
AT1G61570.1 translocase of the inner mitochondrial membrane 137.7e-1841.84Show/hide
Query:  MDSFSS-PSSGSSSQFSATEFRDQLKTQLAQAYAEEFLELKQAKVALADRLAKINVRKVVIVGIYICNLEVRQLAIRQGTSRGTEGANHPCRPQYPTLRA
        MDS+SS P  GS S  S     + +KTQLAQAYAEE +E                                                         TLR 
Subjt:  MDSFSS-PSSGSSSQFSATEFRDQLKTQLAQAYAEEFLELKQAKVALADRLAKINVRKVVIVGIYICNLEVRQLAIRQGTSRGTEGANHPCRPQYPTLRA

Query:  KCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALF
        KCFDKC+TKPGSSL GSESSCISRC+ERY+EAT+I+SR+LF
Subjt:  KCFDKCITKPGSSLSGSESSCISRCMERYIEATSIVSRALF

AT5G50810.1 translocase inner membrane subunit 84.4e-0550Show/hide
Query:  CFDKCITK-PGSSLSGSESSCISRCMERYIEATSIVSR
        C+DKCIT  PGS  S SESSC++ C +RY++ + I+ +
Subjt:  CFDKCITK-PGSSLSGSESSCISRCMERYIEATSIVSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCATTTTCATCGCCTTCAAGCGGTTCTTCTTCCCAATTTTCGGCCACTGAATTCAGGGATCAGCTCAAGACTCAGCTTGCCCAGGCCTACGCCGAGGAGTTTCT
TGAGTTGAAGCAAGCAAAAGTGGCATTAGCAGACAGATTAGCCAAGATTAATGTGAGGAAAGTTGTGATTGTGGGCATCTATATTTGTAATCTGGAGGTGCGACAGCTAG
CTATTAGACAAGGCACATCAAGAGGCACTGAAGGGGCTAATCACCCCTGCAGACCTCAGTACCCTACCTTAAGAGCGAAGTGCTTTGACAAGTGTATCACAAAGCCAGGA
TCAAGCCTTAGTGGGAGTGAGAGCAGTTGCATCTCCAGGTGCATGGAGCGCTATATTGAGGCCACCAGCATCGTCAGTAGAGCCCTGTTTAAGACACCACACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCATTTTCATCGCCTTCAAGCGGTTCTTCTTCCCAATTTTCGGCCACTGAATTCAGGGATCAGCTCAAGACTCAGCTTGCCCAGGCCTACGCCGAGGAGTTTCT
TGAGTTGAAGCAAGCAAAAGTGGCATTAGCAGACAGATTAGCCAAGATTAATGTGAGGAAAGTTGTGATTGTGGGCATCTATATTTGTAATCTGGAGGTGCGACAGCTAG
CTATTAGACAAGGCACATCAAGAGGCACTGAAGGGGCTAATCACCCCTGCAGACCTCAGTACCCTACCTTAAGAGCGAAGTGCTTTGACAAGTGTATCACAAAGCCAGGA
TCAAGCCTTAGTGGGAGTGAGAGCAGTTGCATCTCCAGGTGCATGGAGCGCTATATTGAGGCCACCAGCATCGTCAGTAGAGCCCTGTTTAAGACACCACACTGA
Protein sequenceShow/hide protein sequence
MDSFSSPSSGSSSQFSATEFRDQLKTQLAQAYAEEFLELKQAKVALADRLAKINVRKVVIVGIYICNLEVRQLAIRQGTSRGTEGANHPCRPQYPTLRAKCFDKCITKPG
SSLSGSESSCISRCMERYIEATSIVSRALFKTPH