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Spg029460 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg029460
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPH domain-containing protein
Genome locationscaffold12:35328706..35337267
RNA-Seq ExpressionSpg029460
SyntenySpg029460
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647833.1 hypothetical protein Csa_000579 [Cucumis sativus]4.2e-2168.13Show/hide
Query:  MSGAQALKRIPRIKFPKRHPNPSGPPPSSLC----------STSQTPSSSGVDDQIFFASLNQNASKTIGGKASLQPKRTPMSNEEIEAIL
        M GAQA+KRIPRIKFPKRH + SGP P SL           STS+TPSS G DD +FF+SL ++ASKT+GGKASLQPKRTP+SNEEIEAIL
Subjt:  MSGAQALKRIPRIKFPKRHPNPSGPPPSSLC----------STSQTPSSSGVDDQIFFASLNQNASKTIGGKASLQPKRTPMSNEEIEAIL

KAG7035504.1 hypothetical protein SDJN02_02300 [Cucurbita argyrosperma subsp. argyrosperma]4.8e-2581.71Show/hide
Query:  MSGAQALKRIPRIKFPKRHPNPSGPPPSSLCSTSQTPSSSGVDDQIFFASLNQNASKTIGGKASLQPKRTPMSNEEIEAILV
        M GAQALKRIPRIKFPKRHPNPSG       STSQTP+S GVDDQ+ F SLN+ ASKTIGGKASLQPKRTPMSNEEIEAILV
Subjt:  MSGAQALKRIPRIKFPKRHPNPSGPPPSSLCSTSQTPSSSGVDDQIFFASLNQNASKTIGGKASLQPKRTPMSNEEIEAILV

XP_022958002.1 uncharacterized protein LOC111459363 [Cucurbita moschata]1.2e-2379.27Show/hide
Query:  MSGAQALKRIPRIKFPKRHPNPSGPPPSSLCSTSQTPSSSGVDDQIFFASLNQNASKTIGGKASLQPKRTPMSNEEIEAILV
        M  AQALKRIPRIKFPKRHPNPSG       STSQTP+S GVDDQ+ F SLN+ ASKTIGGKASLQPKRTPMSNEEIEAIL+
Subjt:  MSGAQALKRIPRIKFPKRHPNPSGPPPSSLCSTSQTPSSSGVDDQIFFASLNQNASKTIGGKASLQPKRTPMSNEEIEAILV

XP_023534508.1 uncharacterized protein LOC111796047 [Cucurbita pepo subsp. pepo]1.1e-2480.49Show/hide
Query:  MSGAQALKRIPRIKFPKRHPNPSGPPPSSLCSTSQTPSSSGVDDQIFFASLNQNASKTIGGKASLQPKRTPMSNEEIEAILV
        M GAQALKRIPRIKFPKRHPNPSG       STSQTP+S GVDDQ+ F SLN+ ASKTIGGKASLQPKRTPMSNEEIEAIL+
Subjt:  MSGAQALKRIPRIKFPKRHPNPSGPPPSSLCSTSQTPSSSGVDDQIFFASLNQNASKTIGGKASLQPKRTPMSNEEIEAILV

XP_038875405.1 uncharacterized protein LOC120067868 [Benincasa hispida]2.8e-2580.49Show/hide
Query:  MSGAQALKRIPRIKFPKRHPNPSGPPPSSLCSTSQTPSSSGVDDQIFFASLNQNASKTIGGKASLQPKRTPMSNEEIEAILV
        M GAQA+KRIPRIKFPKRHPNPSG       STS+TPSSSGVDDQIFF+SL Q ASKT+GGKASLQPKRTP+SNEEIEAIL+
Subjt:  MSGAQALKRIPRIKFPKRHPNPSGPPPSSLCSTSQTPSSSGVDDQIFFASLNQNASKTIGGKASLQPKRTPMSNEEIEAILV

TrEMBL top hitse value%identityAlignment
A0A0A0KMD8 Uncharacterized protein1.7e-2070.73Show/hide
Query:  MSGAQALKRIPRIKFPKRHPNPSGPPPSSLCSTSQTPSSSGVDDQIFFASLNQNASKTIGGKASLQPKRTPMSNEEIEAILV
        M GAQA+KRIPRIKFPKRH + SG       STS+TPSS G DD +FF+SL ++ASKT+GGKASLQPKRTP+SNEEIEAIL+
Subjt:  MSGAQALKRIPRIKFPKRHPNPSGPPPSSLCSTSQTPSSSGVDDQIFFASLNQNASKTIGGKASLQPKRTPMSNEEIEAILV

A0A1S3AUJ6 uncharacterized protein LOC1034828442.7e-2171.95Show/hide
Query:  MSGAQALKRIPRIKFPKRHPNPSGPPPSSLCSTSQTPSSSGVDDQIFFASLNQNASKTIGGKASLQPKRTPMSNEEIEAILV
        M GAQA+KRIPRIKFPKRHP+ SG       STS+TPSS+G DD IFF+SL ++ASKT+GGKASLQPKR P+SNEEIEAIL+
Subjt:  MSGAQALKRIPRIKFPKRHPNPSGPPPSSLCSTSQTPSSSGVDDQIFFASLNQNASKTIGGKASLQPKRTPMSNEEIEAILV

A0A6J1DS43 uncharacterized protein LOC1110233427.7e-2171.95Show/hide
Query:  MSGAQALKRIPRIKFPKRHPNPSGPPPSSLCSTSQTPSSSGVDDQIFFASLNQNASKTIGGKASLQPKRTPMSNEEIEAILV
        M GAQA+KRIPRIKFPKRHPNPSG       STSQTPS+ GVDDQ+ F++   N  KT+GGKASLQPKRTPMSNEEIEA+L+
Subjt:  MSGAQALKRIPRIKFPKRHPNPSGPPPSSLCSTSQTPSSSGVDDQIFFASLNQNASKTIGGKASLQPKRTPMSNEEIEAILV

A0A6J1H0Q6 uncharacterized protein LOC1114593635.7e-2479.27Show/hide
Query:  MSGAQALKRIPRIKFPKRHPNPSGPPPSSLCSTSQTPSSSGVDDQIFFASLNQNASKTIGGKASLQPKRTPMSNEEIEAILV
        M  AQALKRIPRIKFPKRHPNPSG       STSQTP+S GVDDQ+ F SLN+ ASKTIGGKASLQPKRTPMSNEEIEAIL+
Subjt:  MSGAQALKRIPRIKFPKRHPNPSGPPPSSLCSTSQTPSSSGVDDQIFFASLNQNASKTIGGKASLQPKRTPMSNEEIEAILV

A0A6J1K8D8 uncharacterized protein LOC1114915855.7e-2479.27Show/hide
Query:  MSGAQALKRIPRIKFPKRHPNPSGPPPSSLCSTSQTPSSSGVDDQIFFASLNQNASKTIGGKASLQPKRTPMSNEEIEAILV
        M  AQALKRIPRIKFPKRHPNPSG       STSQTP+S GVDDQ+ F SLN+ ASKTIGGKASLQPKRTPMSNEEIEAIL+
Subjt:  MSGAQALKRIPRIKFPKRHPNPSGPPPSSLCSTSQTPSSSGVDDQIFFASLNQNASKTIGGKASLQPKRTPMSNEEIEAILV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G23885.1 unknown protein1.2e-1353.66Show/hide
Query:  MSGAQALKRIPRIKFPKRHPNPSGPPPSSLCSTSQTPSSSGVDDQIFFASLNQNASKTIGGKASLQPKRTPMSNEEIEAILV
        M+    LKRIPRIKFP+RH NPS     S  +           D +FF++LN N  KT GGKAS QPKRTP+SNEE+EAIL+
Subjt:  MSGAQALKRIPRIKFPKRHPNPSGPPPSSLCSTSQTPSSSGVDDQIFFASLNQNASKTIGGKASLQPKRTPMSNEEIEAILV

AT5G24165.1 unknown protein2.6e-0847.5Show/hide
Query:  LKRIPRIKFPKRH--PNPSGPPPSSLCSTSQTPSSSGVDDQIFFASLNQNASKTI--GGKASLQPKRTPMSNEEIEAILV
        ++RIPRIKFP+RH   + SGP P S+         SGV   +  +S    A K    GGKASLQPKRTP+S++EIE+I++
Subjt:  LKRIPRIKFPKRH--PNPSGPPPSSLCSTSQTPSSSGVDDQIFFASLNQNASKTI--GGKASLQPKRTPMSNEEIEAILV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGGCCCGCTTGCGCGGGCCGAGCTCGGTCACCTCCCCTCGGTCCCTGATGCCTCTAGCCGCCCCAGTTTCGCCTGGTTTGCCCCGAAACGCCTCCGAATTCCTAA
AAACCCTAGGAGCACGAGCAGGCCACGTCTTCCCCCTCATCTACAAATTTACCGTTGGTGGCACGTGAAGGTCAGAACCTCGCTTGTTGACAAGACGCTTTCGTTCCCTT
CCGTGTTTGTTTGTTTAAACCCACGCCAAGTTGCACCGCATCGGCTTCCCTCGTCGCCATTTGCTTCAAATCGCCGTCACTTTCACCAAGATCTTCCTCAACCCATCTCC
TTCTCCGCACTGCAAAATCACAGAAGACAACGCCATCAAGAAAGCAACCCATCGCCGAGCGACATGTCTGGAGCCCAGGCCCTCAAGAGGATCCCTCGCATCAAGTTCCC
TAAGCGACATCCCAACCCCTCTGGTCCGCCTCCATCTTCCCTTTGTTCTACTTCCCAGACTCCATCAAGCAGTGGGGTGGATGATCAAATTTTCTTCGCATCTTTAAATC
AAAATGCATCCAAAACTATTGGAGGAAAAGCCTCCCTTCAGCCTAAAAGGACTCCAATGTCCAATGAGGAGATTGAGGCTATTTTGGTAAGAGAACCTGTTCCTATTTCT
GGGTGGCTGCATCTGAGGAGCTTTGACAGTGAATTATACTATGCTCCCCCCGAACTGCAGCATCGCAAACAATTTATACTGCCCAATCTGCGCGACAGCGTCACAACGCA
AAGGACACAGCGTCGCGACGTTGTGTCAATGGGTGCCCTAATTATTCCGGAAAATGCCGCAGCGTCTCGACGCTACCTCCTATTCGCGCCTCCTGACCTATGGAGCAGCA
TCTGGAACGAAACTGGTTTCGTTCCAGATCTGAAACGAGGGGGATTTCCCCTTCGTTTCAGGTCGTTCCCTTCGATTTCAGCGGCGCGTGCGAGGATAGAAGCTTCTTAC
GGCGGGTCTGGGTTACAAACGAGCAGCGGCGGCTCTGGGTTACGTACAAGCAGCAGCGCCGGCGGATCTGAAGCTTCTTACGGCGGGTCTGGGTTACAAACGAGCAGCGG
CGGCTCTGGGTTACGTGCAAGCAGCGGCGCCGGCGGATCTGAAGCTTCTTACGGCGGGAAATATAGTTTTGAGCCAATTGGATGTTCGAGATGCGAAAAGAAGCTGAAGA
ATGAAAAAAGAATCAAAGTTGGAAGATTGAAGATAGGCCCATCCGCAGACCAGCGTCGAGACACTGCTCTTTGGGCGTTTCGACGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCGGCCCGCTTGCGCGGGCCGAGCTCGGTCACCTCCCCTCGGTCCCTGATGCCTCTAGCCGCCCCAGTTTCGCCTGGTTTGCCCCGAAACGCCTCCGAATTCCTAA
AAACCCTAGGAGCACGAGCAGGCCACGTCTTCCCCCTCATCTACAAATTTACCGTTGGTGGCACGTGAAGGTCAGAACCTCGCTTGTTGACAAGACGCTTTCGTTCCCTT
CCGTGTTTGTTTGTTTAAACCCACGCCAAGTTGCACCGCATCGGCTTCCCTCGTCGCCATTTGCTTCAAATCGCCGTCACTTTCACCAAGATCTTCCTCAACCCATCTCC
TTCTCCGCACTGCAAAATCACAGAAGACAACGCCATCAAGAAAGCAACCCATCGCCGAGCGACATGTCTGGAGCCCAGGCCCTCAAGAGGATCCCTCGCATCAAGTTCCC
TAAGCGACATCCCAACCCCTCTGGTCCGCCTCCATCTTCCCTTTGTTCTACTTCCCAGACTCCATCAAGCAGTGGGGTGGATGATCAAATTTTCTTCGCATCTTTAAATC
AAAATGCATCCAAAACTATTGGAGGAAAAGCCTCCCTTCAGCCTAAAAGGACTCCAATGTCCAATGAGGAGATTGAGGCTATTTTGGTAAGAGAACCTGTTCCTATTTCT
GGGTGGCTGCATCTGAGGAGCTTTGACAGTGAATTATACTATGCTCCCCCCGAACTGCAGCATCGCAAACAATTTATACTGCCCAATCTGCGCGACAGCGTCACAACGCA
AAGGACACAGCGTCGCGACGTTGTGTCAATGGGTGCCCTAATTATTCCGGAAAATGCCGCAGCGTCTCGACGCTACCTCCTATTCGCGCCTCCTGACCTATGGAGCAGCA
TCTGGAACGAAACTGGTTTCGTTCCAGATCTGAAACGAGGGGGATTTCCCCTTCGTTTCAGGTCGTTCCCTTCGATTTCAGCGGCGCGTGCGAGGATAGAAGCTTCTTAC
GGCGGGTCTGGGTTACAAACGAGCAGCGGCGGCTCTGGGTTACGTACAAGCAGCAGCGCCGGCGGATCTGAAGCTTCTTACGGCGGGTCTGGGTTACAAACGAGCAGCGG
CGGCTCTGGGTTACGTGCAAGCAGCGGCGCCGGCGGATCTGAAGCTTCTTACGGCGGGAAATATAGTTTTGAGCCAATTGGATGTTCGAGATGCGAAAAGAAGCTGAAGA
ATGAAAAAAGAATCAAAGTTGGAAGATTGAAGATAGGCCCATCCGCAGACCAGCGTCGAGACACTGCTCTTTGGGCGTTTCGACGCTGA
Protein sequenceShow/hide protein sequence
MVGPLARAELGHLPSVPDASSRPSFAWFAPKRLRIPKNPRSTSRPRLPPHLQIYRWWHVKVRTSLVDKTLSFPSVFVCLNPRQVAPHRLPSSPFASNRRHFHQDLPQPIS
FSALQNHRRQRHQESNPSPSDMSGAQALKRIPRIKFPKRHPNPSGPPPSSLCSTSQTPSSSGVDDQIFFASLNQNASKTIGGKASLQPKRTPMSNEEIEAILVREPVPIS
GWLHLRSFDSELYYAPPELQHRKQFILPNLRDSVTTQRTQRRDVVSMGALIIPENAAASRRYLLFAPPDLWSSIWNETGFVPDLKRGGFPLRFRSFPSISAARARIEASY
GGSGLQTSSGGSGLRTSSSAGGSEASYGGSGLQTSSGGSGLRASSGAGGSEASYGGKYSFEPIGCSRCEKKLKNEKRIKVGRLKIGPSADQRRDTALWAFRR