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Spg029564 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg029564
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein PIR isoform X2
Genome locationscaffold2:21730765..21732969
RNA-Seq ExpressionSpg029564
SyntenySpg029564
Gene Ontology termsGO:0030833 - regulation of actin filament polymerization (biological process)
GO:0031267 - small GTPase binding (molecular function)
InterPro domainsIPR008081 - Cytoplasmic FMR1-interacting


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023906.1 Protein PIR, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-1256.99Show/hide
Query:  PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESLNWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL
        P ++  L+  IS K  VL  MI  + + +   +         L   G   GCMRSINE+LNWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL
Subjt:  PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESLNWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL

XP_022961250.1 protein PIR isoform X1 [Cucurbita moschata]1.1e-1256.99Show/hide
Query:  PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESLNWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL
        P ++  L+  IS K  VL  MI  + + +   +         L   G   GCMRSINE+LNWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL
Subjt:  PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESLNWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL

XP_022961253.1 protein PIR isoform X2 [Cucurbita moschata]1.1e-1256.99Show/hide
Query:  PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESLNWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL
        P ++  L+  IS K  VL  MI  + + +   +         L   G   GCMRSINE+LNWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL
Subjt:  PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESLNWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL

XP_022961254.1 protein PIR isoform X3 [Cucurbita moschata]1.1e-1256.99Show/hide
Query:  PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESLNWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL
        P ++  L+  IS K  VL  MI  + + +   +         L   G   GCMRSINE+LNWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL
Subjt:  PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESLNWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL

XP_022988011.1 protein PIR isoform X3 [Cucurbita maxima]1.1e-1256.99Show/hide
Query:  PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESLNWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL
        P ++  L+  IS K  VL  MI  + + +   +         L   G   GCMRSINE+LNWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL
Subjt:  PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESLNWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL

TrEMBL top hitse value%identityAlignment
A0A6J1H9U6 protein PIR isoform X15.3e-1356.99Show/hide
Query:  PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESLNWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL
        P ++  L+  IS K  VL  MI  + + +   +         L   G   GCMRSINE+LNWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL
Subjt:  PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESLNWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL

A0A6J1HBA3 protein PIR isoform X25.3e-1356.99Show/hide
Query:  PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESLNWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL
        P ++  L+  IS K  VL  MI  + + +   +         L   G   GCMRSINE+LNWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL
Subjt:  PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESLNWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL

A0A6J1JG02 protein PIR isoform X35.3e-1356.99Show/hide
Query:  PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESLNWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL
        P ++  L+  IS K  VL  MI  + + +   +         L   G   GCMRSINE+LNWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL
Subjt:  PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESLNWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL

A0A6J1JKE8 protein PIR isoform X25.3e-1356.99Show/hide
Query:  PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESLNWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL
        P ++  L+  IS K  VL  MI  + + +   +         L   G   GCMRSINE+LNWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL
Subjt:  PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESLNWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL

A0A6J1JL09 protein PIR isoform X15.3e-1356.99Show/hide
Query:  PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESLNWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL
        P ++  L+  IS K  VL  MI  + + +   +         L   G   GCMRSINE+LNWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL
Subjt:  PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESLNWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL

SwissProt top hitse value%identityAlignment
Q5S2C3 Protein PIR1.3e-0845.16Show/hide
Query:  PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESLNWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL
        P ++  L+  IS K   L    PM+S + E       +    L+  G   GCM+ I E LNW  KSEL+ EVL GIKEIGSV+Y + LLDIVL
Subjt:  PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESLNWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL

Arabidopsis top hitse value%identityAlignment
AT5G18410.1 transcription activators1.4e-1046.32Show/hide
Query:  PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESLNWEAKSELRLEVLHGIKEIGSVLYLISLLDIVLVS
        P ++  L+  IS K   L    PM+S + E       +    L+  G   GCM+ I E LNW  KSEL+ EVL GIKEIGSV+Y + LLDIVLVS
Subjt:  PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESLNWEAKSELRLEVLHGIKEIGSVLYLISLLDIVLVS

AT5G18410.2 transcription activators9.2e-1045.16Show/hide
Query:  PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESLNWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL
        P ++  L+  IS K   L    PM+S + E       +    L+  G   GCM+ I E LNW  KSEL+ EVL GIKEIGSV+Y + LLDIVL
Subjt:  PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESLNWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL

AT5G18410.3 transcription activators1.4e-1046.32Show/hide
Query:  PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESLNWEAKSELRLEVLHGIKEIGSVLYLISLLDIVLVS
        P ++  L+  IS K   L    PM+S + E       +    L+  G   GCM+ I E LNW  KSEL+ EVL GIKEIGSV+Y + LLDIVLVS
Subjt:  PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESLNWEAKSELRLEVLHGIKEIGSVLYLISLLDIVLVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGACCGGACGGGACGGATGGCAGTGGCGGCGAGCTTCGACAGCAACGGTGGTGGCGGCGAGCTTCAACGGAGACAGCAGCTGGAGGCTAGGGTTAGGGTAGGAGC
GTGTCCAGATGAATCCGTGTCCGACACAGATCCTCCCTCCATTTTAGCTGTGCTAGTTTGGGTCATATCAGAAAAGGCTTTAGTGTTGTCCAAGATGATTCCAATGGTGT
CCAAGATTGTAGAACATAAGCTCAATGGTTCTAAGCAATGTTTTAAAAGGCTTACGCCTCGAGGCTCGCCTCGAGGTTGCATGAGATCGATCAATGAAAGTCTTAACTGG
GAGGCAAAGTCAGAGCTCAGATTGGAGGTCCTGCATGGAATAAAGGAGATTGGAAGTGTATTATATTTGATTAGCCTTCTTGATATCGTGCTGGTCAGTATTTTCTCTGT
TCTCGTTTTGAAATTGTGCAAAAGGATATGTACTTCTGCAATTTCTATTTCTGAAGTAAGATTTAGAAGTCTTTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGACCGGACGGGACGGATGGCAGTGGCGGCGAGCTTCGACAGCAACGGTGGTGGCGGCGAGCTTCAACGGAGACAGCAGCTGGAGGCTAGGGTTAGGGTAGGAGC
GTGTCCAGATGAATCCGTGTCCGACACAGATCCTCCCTCCATTTTAGCTGTGCTAGTTTGGGTCATATCAGAAAAGGCTTTAGTGTTGTCCAAGATGATTCCAATGGTGT
CCAAGATTGTAGAACATAAGCTCAATGGTTCTAAGCAATGTTTTAAAAGGCTTACGCCTCGAGGCTCGCCTCGAGGTTGCATGAGATCGATCAATGAAAGTCTTAACTGG
GAGGCAAAGTCAGAGCTCAGATTGGAGGTCCTGCATGGAATAAAGGAGATTGGAAGTGTATTATATTTGATTAGCCTTCTTGATATCGTGCTGGTCAGTATTTTCTCTGT
TCTCGTTTTGAAATTGTGCAAAAGGATATGTACTTCTGCAATTTCTATTTCTGAAGTAAGATTTAGAAGTCTTTATTAA
Protein sequenceShow/hide protein sequence
MADRTGRMAVAASFDSNGGGGELQRRQQLEARVRVGACPDESVSDTDPPSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESLNW
EAKSELRLEVLHGIKEIGSVLYLISLLDIVLVSIFSVLVLKLCKRICTSAISISEVRFRSLY