; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg029577 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg029577
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRNA-binding protein
Genome locationscaffold2:23024015..23029445
RNA-Seq ExpressionSpg029577
SyntenySpg029577
Gene Ontology termsGO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR034215 - RBM42, RNA recognition motif
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598941.1 RNA-binding protein 42, partial [Cucurbita argyrosperma subsp. sororia]1.6e-8066.94Show/hide
Query:  SAPSPISSSQFAYSMGPCFPVPFQLQQ----------------------VPVSAAGVYP--------IPQYQQVQQLFQKDAQIITPEALESVKVALARD
        SAPS  S SQF YS G  FP+PF LQQ                      VP+    VYP        +PQYQQ QQLFQ+DAQ ITPEALESVK ALA  
Subjt:  SAPSPISSSQFAYSMGPCFPVPFQLQQ----------------------VPVSAAGVYP--------IPQYQQVQQLFQKDAQIITPEALESVKVALARD

Query:  EMEHNAETKRKAIPRKAAGQKWQDPTLADWPENDYRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANPLDLTTALKEMNGKY
        E+EH AETK+KAIPRKAAGQ W+DPTLA+WPENDYRLFCGDLG+EVNDDVLS+AFS+FPSFNMARVVR K TGKTKGYGFVSF+NP DL  ALKEMNGKY
Subjt:  EMEHNAETKRKAIPRKAAGQKWQDPTLADWPENDYRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANPLDLTTALKEMNGKY

Query:  VGNRPIKLRKNKWKDRIDYEALQRLKNKSEKSSKIQKKSVLH
        VGNRPIKLRK+ WK+R DY+AL+R KN ++K SK+ KKS+LH
Subjt:  VGNRPIKLRKNKWKDRIDYEALQRLKNKSEKSSKIQKKSVLH

KAG7029895.1 RNA-binding protein 42 [Cucurbita argyrosperma subsp. argyrosperma]1.6e-8066.94Show/hide
Query:  SAPSPISSSQFAYSMGPCFPVPFQLQQ----------------------VPVSAAGVYP--------IPQYQQVQQLFQKDAQIITPEALESVKVALARD
        SAPS  S SQF YS G  FP+PF LQQ                      VP+    VYP        +PQYQQ QQLFQ+DAQ ITPEALESVK ALA  
Subjt:  SAPSPISSSQFAYSMGPCFPVPFQLQQ----------------------VPVSAAGVYP--------IPQYQQVQQLFQKDAQIITPEALESVKVALARD

Query:  EMEHNAETKRKAIPRKAAGQKWQDPTLADWPENDYRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANPLDLTTALKEMNGKY
        E+EH AETK+KAIPRKAAGQ W+DPTLA+WPENDYRLFCGDLG+EVNDDVLS+AFS+FPSFNMARVVR K TGKTKGYGFVSF+NP DL  ALKEMNGKY
Subjt:  EMEHNAETKRKAIPRKAAGQKWQDPTLADWPENDYRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANPLDLTTALKEMNGKY

Query:  VGNRPIKLRKNKWKDRIDYEALQRLKNKSEKSSKIQKKSVLH
        VGNRPIKLRK+ WK+R DY+AL+R KN ++K SK+ KKS+LH
Subjt:  VGNRPIKLRKNKWKDRIDYEALQRLKNKSEKSSKIQKKSVLH

XP_022997003.1 RNA-binding protein 42-like [Cucurbita maxima]1.6e-8066.94Show/hide
Query:  SAPSPISSSQFAYSMGPCFPVPFQLQQ----------------------VPVSAAGVYP--------IPQYQQVQQLFQKDAQIITPEALESVKVALARD
        SAPS  S SQF YS G  FP+PF LQQ                      VP+    VYP        +PQYQQ QQLFQ+DAQ ITPEALESVK ALA  
Subjt:  SAPSPISSSQFAYSMGPCFPVPFQLQQ----------------------VPVSAAGVYP--------IPQYQQVQQLFQKDAQIITPEALESVKVALARD

Query:  EMEHNAETKRKAIPRKAAGQKWQDPTLADWPENDYRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANPLDLTTALKEMNGKY
        E+EH AETK+KAIPRKAAGQ W+DPTLA+WPENDYRLFCGDLG+EVNDDVLS+AFS+FPSFNMARVVR K TGKTKGYGFVSF+NP DL  ALKEMNGKY
Subjt:  EMEHNAETKRKAIPRKAAGQKWQDPTLADWPENDYRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANPLDLTTALKEMNGKY

Query:  VGNRPIKLRKNKWKDRIDYEALQRLKNKSEKSSKIQKKSVLH
        VGNRPIKLRK+ WK+R DY+AL+R KN ++K SK+ KKS+LH
Subjt:  VGNRPIKLRKNKWKDRIDYEALQRLKNKSEKSSKIQKKSVLH

XP_023545858.1 RNA-binding protein 42-like [Cucurbita pepo subsp. pepo]1.6e-8066.94Show/hide
Query:  SAPSPISSSQFAYSMGPCFPVPFQLQQ----------------------VPVSAAGVYP--------IPQYQQVQQLFQKDAQIITPEALESVKVALARD
        SAPS  S SQF YS G  FP+PF LQQ                      VP+    VYP        +PQYQQ QQLFQ+DAQ ITPEALESVK ALA  
Subjt:  SAPSPISSSQFAYSMGPCFPVPFQLQQ----------------------VPVSAAGVYP--------IPQYQQVQQLFQKDAQIITPEALESVKVALARD

Query:  EMEHNAETKRKAIPRKAAGQKWQDPTLADWPENDYRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANPLDLTTALKEMNGKY
        E+EH AETK+KAIPRKAAGQ W+DPTLA+WPENDYRLFCGDLG+EVNDDVLS+AFS+FPSFNMARVVR K TGKTKGYGFVSF+NP DL  ALKEMNGKY
Subjt:  EMEHNAETKRKAIPRKAAGQKWQDPTLADWPENDYRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANPLDLTTALKEMNGKY

Query:  VGNRPIKLRKNKWKDRIDYEALQRLKNKSEKSSKIQKKSVLH
        VGNRPIKLRK+ WK+R DY+AL+R KN ++K SK+ KKS+LH
Subjt:  VGNRPIKLRKNKWKDRIDYEALQRLKNKSEKSSKIQKKSVLH

XP_038877084.1 RNA-binding protein 42-like [Benincasa hispida]5.6e-9781.82Show/hide
Query:  MAALSFSAPSPISSSQFAYSMGPCFPVPFQLQQ-------------VPVSAAGVYPIPQYQQVQQLFQKDAQIITPEALESVKVALARDEMEHNAETKRK
        MAA  F APS ISSSQFAYS+GPCFPVPF LQQ             V   AA  YP+PQYQQ QQLFQKDAQIITPEALESVKVALARDEMEH AETKRK
Subjt:  MAALSFSAPSPISSSQFAYSMGPCFPVPFQLQQ-------------VPVSAAGVYPIPQYQQVQQLFQKDAQIITPEALESVKVALARDEMEHNAETKRK

Query:  AIPRKAAGQKWQDPTLADWPENDYRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANPLDLTTALKEMNGKYVGNRPIKLRKN
        AIPRKAAGQKW+DPTLADWPENDYRLFCGDLG+EVNDDVLSRAFSQFPSFNMARVVR K TGKTKGYGFVSF NPLDLT ALKE NGKYVGNRPIKLRK+
Subjt:  AIPRKAAGQKWQDPTLADWPENDYRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANPLDLTTALKEMNGKYVGNRPIKLRKN

Query:  KWKDRIDYEALQRLKNKSEKSSKIQKKSVLH
        KWKDRIDYEAL +LKNK++K+ K+QKKSVLH
Subjt:  KWKDRIDYEALQRLKNKSEKSSKIQKKSVLH

TrEMBL top hitse value%identityAlignment
A0A1S4BXV5 RNA-binding protein 42-like isoform X25.1e-8066.53Show/hide
Query:  SFSAPSPISSSQFAYSMGPCFPVPFQLQQ----------------------VPVSAAGVYPIPQYQQVQQLFQKDAQIITPEALESVKVALARDEMEHNA
        S SA +  SSSQ+ YS G  FP PF LQQ                       P  A GVY +PQ+QQ QQLFQ+DAQ ITPEALE+VK ALA  E+EH A
Subjt:  SFSAPSPISSSQFAYSMGPCFPVPFQLQQ----------------------VPVSAAGVYPIPQYQQVQQLFQKDAQIITPEALESVKVALARDEMEHNA

Query:  ETKRKAIPRKAAGQKWQDPTLADWPENDYRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANPLDLTTALKEMNGKYVGNRPI
        E K+KA+PRKAAGQ W+DPTLA+WPENDYRLFCGDLG+EVNDDVLS+AFS+FP+FNMA+VVR K TGKTKGYGFVSF+NPLDL  ALKEMNGKYVGNRPI
Subjt:  ETKRKAIPRKAAGQKWQDPTLADWPENDYRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANPLDLTTALKEMNGKYVGNRPI

Query:  KLRKNKWKDRIDYEALQRLKNKSEKSSKIQKKSVLH
        KLRK+KW++RIDYEAL+  KN+S K  K+ KKS+LH
Subjt:  KLRKNKWKDRIDYEALQRLKNKSEKSSKIQKKSVLH

A0A6J1ET57 RNA-binding protein 42-like7.9e-8166.94Show/hide
Query:  SAPSPISSSQFAYSMGPCFPVPFQLQQ----------------------VPVSAAGVYP--------IPQYQQVQQLFQKDAQIITPEALESVKVALARD
        SAPS  S SQF YS G  FP+PF LQQ                      VP+    VYP        +PQYQQ QQLFQ+DAQ ITPEALESVK ALA  
Subjt:  SAPSPISSSQFAYSMGPCFPVPFQLQQ----------------------VPVSAAGVYP--------IPQYQQVQQLFQKDAQIITPEALESVKVALARD

Query:  EMEHNAETKRKAIPRKAAGQKWQDPTLADWPENDYRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANPLDLTTALKEMNGKY
        E+EH AETK+KAIPRKAAGQ W+DPTLA+WPENDYRLFCGDLG+EVNDDVLS+AFS+FPSFNMARVVR K TGKTKGYGFVSF+NP DL  ALKEMNGKY
Subjt:  EMEHNAETKRKAIPRKAAGQKWQDPTLADWPENDYRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANPLDLTTALKEMNGKY

Query:  VGNRPIKLRKNKWKDRIDYEALQRLKNKSEKSSKIQKKSVLH
        VGNRPIKLRK+ WK+R DY+AL+R KN ++K SK+ KKS+LH
Subjt:  VGNRPIKLRKNKWKDRIDYEALQRLKNKSEKSSKIQKKSVLH

A0A6J1FBP0 RNA-binding protein 42-like5.1e-8066.53Show/hide
Query:  FSAPSPISSS---QFAYSMGPCFPVPFQLQQ----------------------VPVSAAGVYP----------IPQYQQVQQLFQKDAQIITPEALESVK
        FSAPS  SSS   QF YS G  FP+PF LQQ                      VP+  A VYP          +PQYQQ QQLFQ+DAQ ITPEALESVK
Subjt:  FSAPSPISSS---QFAYSMGPCFPVPFQLQQ----------------------VPVSAAGVYP----------IPQYQQVQQLFQKDAQIITPEALESVK

Query:  VALARDEMEHNAETKRKAIPRKAAGQKWQDPTLADWPENDYRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANPLDLTTALK
         ALA  E+EH AETK+KAIPRKAAGQ W+DPTL +WPENDYRLFCGDLG+EVNDDVLS+AFS+FPSFNMARVVR K TGKTKGYGFVSF+NP DL  ALK
Subjt:  VALARDEMEHNAETKRKAIPRKAAGQKWQDPTLADWPENDYRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANPLDLTTALK

Query:  EMNGKYVGNRPIKLRKNKWKDRIDYEALQRLKNKSEKSSKIQKKSVLH
        EMNGKYVGNRPIKLRK+ WK+R DYEAL R KN ++K SK+ KKS+LH
Subjt:  EMNGKYVGNRPIKLRKNKWKDRIDYEALQRLKNKSEKSSKIQKKSVLH

A0A6J1HLU5 RNA-binding protein 42-like8.7e-8066Show/hide
Query:  FSAPSPISSS---QFAYSMGPCFPVPFQLQQ----------------------VPVSAAGVYP------------IPQYQQVQQLFQKDAQIITPEALES
        FSAPS  SSS   QF YS G  FP+PF LQQ                      VP+  A VYP            +PQYQQ QQLFQ+DAQ ITPEALES
Subjt:  FSAPSPISSS---QFAYSMGPCFPVPFQLQQ----------------------VPVSAAGVYP------------IPQYQQVQQLFQKDAQIITPEALES

Query:  VKVALARDEMEHNAETKRKAIPRKAAGQKWQDPTLADWPENDYRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANPLDLTTA
        VK ALA  E+EH AETK+KAIPRKAAGQ W+DPTL +WPENDYRLFCGDLG+EVNDDVLS+AFS+FPSFNMARVVR K TGKTKGYGFVSF+NP DL  A
Subjt:  VKVALARDEMEHNAETKRKAIPRKAAGQKWQDPTLADWPENDYRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANPLDLTTA

Query:  LKEMNGKYVGNRPIKLRKNKWKDRIDYEALQRLKNKSEKSSKIQKKSVLH
        LKEMNGKYVGNRPIKLRK+ WK+R DYEAL R KN ++K SK+ KKS+LH
Subjt:  LKEMNGKYVGNRPIKLRKNKWKDRIDYEALQRLKNKSEKSSKIQKKSVLH

A0A6J1KCL6 RNA-binding protein 42-like7.9e-8166.94Show/hide
Query:  SAPSPISSSQFAYSMGPCFPVPFQLQQ----------------------VPVSAAGVYP--------IPQYQQVQQLFQKDAQIITPEALESVKVALARD
        SAPS  S SQF YS G  FP+PF LQQ                      VP+    VYP        +PQYQQ QQLFQ+DAQ ITPEALESVK ALA  
Subjt:  SAPSPISSSQFAYSMGPCFPVPFQLQQ----------------------VPVSAAGVYP--------IPQYQQVQQLFQKDAQIITPEALESVKVALARD

Query:  EMEHNAETKRKAIPRKAAGQKWQDPTLADWPENDYRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANPLDLTTALKEMNGKY
        E+EH AETK+KAIPRKAAGQ W+DPTLA+WPENDYRLFCGDLG+EVNDDVLS+AFS+FPSFNMARVVR K TGKTKGYGFVSF+NP DL  ALKEMNGKY
Subjt:  EMEHNAETKRKAIPRKAAGQKWQDPTLADWPENDYRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANPLDLTTALKEMNGKY

Query:  VGNRPIKLRKNKWKDRIDYEALQRLKNKSEKSSKIQKKSVLH
        VGNRPIKLRK+ WK+R DY+AL+R KN ++K SK+ KKS+LH
Subjt:  VGNRPIKLRKNKWKDRIDYEALQRLKNKSEKSSKIQKKSVLH

SwissProt top hitse value%identityAlignment
Q0P5L0 RNA-binding protein 423.0e-3754.42Show/hide
Query:  ALESVKVALARDEMEHNAETKRKAIPRKAAGQKWQDPTLADWPENDYRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANPLD
        ALE V   L+ D+ +   E  ++ I R AAG  W+DP+L +W  +D+R+FCGDLG+EVNDD+L+RAFS+FPSF  A+V+R K TGKTKGYGFVSF +P D
Subjt:  ALESVKVALARDEMEHNAETKRKAIPRKAAGQKWQDPTLADWPENDYRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANPLD

Query:  LTTALKEMNGKYVGNRPIKLRKNKWKDRIDYEALQRLKNKSEKSSKI
           A++EMNGKYVG+RPIKLRK+ WKDR     L  ++ K ++  K+
Subjt:  LTTALKEMNGKYVGNRPIKLRKNKWKDRIDYEALQRLKNKSEKSSKI

Q6AXT7 RNA-binding protein 424.0e-3754.42Show/hide
Query:  ALESVKVALARDEMEHNAETKRKAIPRKAAGQKWQDPTLADWPENDYRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANPLD
        ALE V   L  D+ +   E  ++ I R AAG  W+DP+L +W  +D+R+FCGDLG+EVNDD+L+RAFS+FPSF  A+V+R K TGKTKGYGFVSF +P D
Subjt:  ALESVKVALARDEMEHNAETKRKAIPRKAAGQKWQDPTLADWPENDYRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANPLD

Query:  LTTALKEMNGKYVGNRPIKLRKNKWKDRIDYEALQRLKNKSEKSSKI
           A++EMNGKYVG+RPIKLRK+ WKDR     L  ++ K ++  K+
Subjt:  LTTALKEMNGKYVGNRPIKLRKNKWKDRIDYEALQRLKNKSEKSSKI

Q6DRG1 RNA-binding protein 423.4e-3653.1Show/hide
Query:  PEALESVKVALARDEMEHNAETKRKAIPRKAAGQKWQDPTLADWPENDYRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANP
        PE +    V  + ++ +   + K K   R AAG  W+D +L +W  +D+R+FCGDLG+EVNDD+L+RAFS++PSF  A+VVR K TGKTKGYGFVSF +P
Subjt:  PEALESVKVALARDEMEHNAETKRKAIPRKAAGQKWQDPTLADWPENDYRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANP

Query:  LDLTTALKEMNGKYVGNRPIKLRKNKWKDRIDYEALQRLKNKSEK
         D   A++EMNG+YVG+RPIKLRK+ WKDR + E ++  KN+ EK
Subjt:  LDLTTALKEMNGKYVGNRPIKLRKNKWKDRIDYEALQRLKNKSEK

Q91V81 RNA-binding protein 424.0e-3754.42Show/hide
Query:  ALESVKVALARDEMEHNAETKRKAIPRKAAGQKWQDPTLADWPENDYRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANPLD
        ALE V   L  D+ +   E  ++ I R AAG  W+DP+L +W  +D+R+FCGDLG+EVNDD+L+RAFS+FPSF  A+V+R K TGKTKGYGFVSF +P D
Subjt:  ALESVKVALARDEMEHNAETKRKAIPRKAAGQKWQDPTLADWPENDYRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANPLD

Query:  LTTALKEMNGKYVGNRPIKLRKNKWKDRIDYEALQRLKNKSEKSSKI
           A++EMNGKYVG+RPIKLRK+ WKDR     L  ++ K ++  K+
Subjt:  LTTALKEMNGKYVGNRPIKLRKNKWKDRIDYEALQRLKNKSEKSSKI

Q9BTD8 RNA-binding protein 424.0e-3754.42Show/hide
Query:  ALESVKVALARDEMEHNAETKRKAIPRKAAGQKWQDPTLADWPENDYRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANPLD
        ALE V   L  D+ +   E  ++ I R AAG  W+DP+L +W  +D+R+FCGDLG+EVNDD+L+RAFS+FPSF  A+V+R K TGKTKGYGFVSF +P D
Subjt:  ALESVKVALARDEMEHNAETKRKAIPRKAAGQKWQDPTLADWPENDYRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANPLD

Query:  LTTALKEMNGKYVGNRPIKLRKNKWKDRIDYEALQRLKNKSEKSSKI
           A++EMNGKYVG+RPIKLRK+ WKDR     L  ++ K ++  K+
Subjt:  LTTALKEMNGKYVGNRPIKLRKNKWKDRIDYEALQRLKNKSEKSSKI

Arabidopsis top hitse value%identityAlignment
AT1G17370.1 oligouridylate binding protein 1B2.7e-1243.84Show/hide
Query:  YRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANPLDLTTALKEMNGKYVGNRPIK
        + +F GDL  EV D +L   FS +P+ + ARV+  + TG+++G+GFVSF N  D  TA+ E+ GK++G+R I+
Subjt:  YRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANPLDLTTALKEMNGKYVGNRPIK

AT1G17370.2 oligouridylate binding protein 1B2.7e-1243.84Show/hide
Query:  YRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANPLDLTTALKEMNGKYVGNRPIK
        + +F GDL  EV D +L   FS +P+ + ARV+  + TG+++G+GFVSF N  D  TA+ E+ GK++G+R I+
Subjt:  YRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANPLDLTTALKEMNGKYVGNRPIK

AT1G54080.1 oligouridylate-binding protein 1A7.0e-1347.95Show/hide
Query:  YRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANPLDLTTALKEMNGKYVGNRPIK
        + +F GDL  EV D  L  +FS F S + ARV+  + TG+++G+GFVSF N  D  TA+ EMNGK+V +R I+
Subjt:  YRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANPLDLTTALKEMNGKYVGNRPIK

AT3G04500.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.1e-7360.25Show/hide
Query:  SFSAPSPISSSQFAYSMGPCFPVPFQLQQ---------VPVSAA----------------GVYPIPQYQQVQQLFQKDAQIITPEALESVKVALARDEME
        S  + S  SSSQ+ Y+    +  P+Q  Q         VP   A                 VY  PQYQQ  QLFQ+DAQ ITPEALE+VK ALA  E E
Subjt:  SFSAPSPISSSQFAYSMGPCFPVPFQLQQ---------VPVSAA----------------GVYPIPQYQQVQQLFQKDAQIITPEALESVKVALARDEME

Query:  HNAETKRKAIPRKAAGQKWQDPTLADWPENDYRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANPLDLTTALKEMNGKYVGN
        H AETK++AIPRKAAGQ W+DPTL++WPENDYRLFCGDLG+EVNDDVLS+AF++FP+FNMA+V+R K TGKTKGYGFVSF NP DL  ALKEMNGKYVGN
Subjt:  HNAETKRKAIPRKAAGQKWQDPTLADWPENDYRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANPLDLTTALKEMNGKYVGN

Query:  RPIKLRKNKWKDRIDYEALQRLKNKSEKSSKIQKKSVLH
        RPIKLRK+ WK+R D EA +R K+ S K  K  KKS+LH
Subjt:  RPIKLRKNKWKDRIDYEALQRLKNKSEKSSKIQKKSVLH

AT3G14100.1 RNA-binding (RRM/RBD/RNP motifs) family protein7.0e-1346.58Show/hide
Query:  YRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANPLDLTTALKEMNGKYVGNRPIK
        + +F GDL  EV D  L ++FS F S + ARV+  + TG+++G+GFVSF N  D  TA+ EMNGK++ +R I+
Subjt:  YRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANPLDLTTALKEMNGKYVGNRPIK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCCCTGTCTTTCTCGGCTCCCTCACCCATTTCTTCTTCCCAATTTGCTTATTCCATGGGGCCCTGCTTTCCGGTTCCATTTCAGCTTCAACAAGTTCCAGTTTC
CGCCGCTGGTGTCTACCCTATCCCTCAGTACCAGCAGGTGCAGCAGTTGTTTCAAAAAGATGCCCAAATAATAACACCTGAAGCACTTGAGAGTGTAAAAGTTGCCCTTG
CAAGAGACGAAATGGAGCACAATGCAGAAACGAAAAGAAAAGCGATTCCTCGTAAAGCTGCTGGGCAGAAATGGCAGGATCCTACACTTGCAGATTGGCCTGAAAATGAT
TATCGACTTTTCTGTGGCGATCTTGGTCACGAGGTGAATGATGATGTTCTTTCTAGAGCATTTTCACAATTTCCGTCCTTTAACATGGCCAGGGTTGTGAGATATAAGGG
AACAGGCAAAACGAAGGGCTATGGTTTTGTTAGCTTTGCCAATCCTTTGGATCTCACAACAGCACTCAAAGAAATGAATGGTAAATACGTTGGGAATAGGCCAATAAAAC
TAAGGAAAAACAAGTGGAAGGACAGAATTGATTACGAGGCTCTTCAAAGACTAAAGAATAAAAGTGAAAAGAGTTCGAAGATACAAAAGAAAAGTGTGTTGCACAGCCCA
GTCACCCAGATCCGTCTCTCTCCCTTTCGTTTCTCCTCCGCCGGCAGCAAGATCTCACCGTCGCTTGCCCAGATCTGCCGCTCACGAGTACGCTGTCCTCGCCTAGATCA
GCCGAGGCTCGTCGTCGTTCGCCCAGATCCGCTGCTCGCGAGTGTCCAGATCTCGTCGTCGTCTCCCTCGTCTCCGTCGTGGGCTCGTTCCAGCCTCGTCTTCCCTTCGA
ATCGGCTGGAGCGGGCTCGATCTGGGCTCATTCCAGCCTTGTTTATAAAAATAAAAAAAAAAGATAATCGAAGAGGGTTCTGGGCTCCCCTTTTTCTTCGGTTCGAGGAA
GAAGAAGACCCGCAGCTTCAGACCGACGATGTGGAGAAAATCGCAACAGCAGCGAACAGAGCAGGCCGACGGCACCTTGCAGATAGATCGACGGCAACAACGGACAGATC
GACGACAACAGCTTCAGATTTGACGCGATTCCACTGCAAGCTTGACGGTGGCTCGATGTCAGCTACAGATCTAAGAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCCCTGTCTTTCTCGGCTCCCTCACCCATTTCTTCTTCCCAATTTGCTTATTCCATGGGGCCCTGCTTTCCGGTTCCATTTCAGCTTCAACAAGTTCCAGTTTC
CGCCGCTGGTGTCTACCCTATCCCTCAGTACCAGCAGGTGCAGCAGTTGTTTCAAAAAGATGCCCAAATAATAACACCTGAAGCACTTGAGAGTGTAAAAGTTGCCCTTG
CAAGAGACGAAATGGAGCACAATGCAGAAACGAAAAGAAAAGCGATTCCTCGTAAAGCTGCTGGGCAGAAATGGCAGGATCCTACACTTGCAGATTGGCCTGAAAATGAT
TATCGACTTTTCTGTGGCGATCTTGGTCACGAGGTGAATGATGATGTTCTTTCTAGAGCATTTTCACAATTTCCGTCCTTTAACATGGCCAGGGTTGTGAGATATAAGGG
AACAGGCAAAACGAAGGGCTATGGTTTTGTTAGCTTTGCCAATCCTTTGGATCTCACAACAGCACTCAAAGAAATGAATGGTAAATACGTTGGGAATAGGCCAATAAAAC
TAAGGAAAAACAAGTGGAAGGACAGAATTGATTACGAGGCTCTTCAAAGACTAAAGAATAAAAGTGAAAAGAGTTCGAAGATACAAAAGAAAAGTGTGTTGCACAGCCCA
GTCACCCAGATCCGTCTCTCTCCCTTTCGTTTCTCCTCCGCCGGCAGCAAGATCTCACCGTCGCTTGCCCAGATCTGCCGCTCACGAGTACGCTGTCCTCGCCTAGATCA
GCCGAGGCTCGTCGTCGTTCGCCCAGATCCGCTGCTCGCGAGTGTCCAGATCTCGTCGTCGTCTCCCTCGTCTCCGTCGTGGGCTCGTTCCAGCCTCGTCTTCCCTTCGA
ATCGGCTGGAGCGGGCTCGATCTGGGCTCATTCCAGCCTTGTTTATAAAAATAAAAAAAAAAGATAATCGAAGAGGGTTCTGGGCTCCCCTTTTTCTTCGGTTCGAGGAA
GAAGAAGACCCGCAGCTTCAGACCGACGATGTGGAGAAAATCGCAACAGCAGCGAACAGAGCAGGCCGACGGCACCTTGCAGATAGATCGACGGCAACAACGGACAGATC
GACGACAACAGCTTCAGATTTGACGCGATTCCACTGCAAGCTTGACGGTGGCTCGATGTCAGCTACAGATCTAAGAGGATGA
Protein sequenceShow/hide protein sequence
MAALSFSAPSPISSSQFAYSMGPCFPVPFQLQQVPVSAAGVYPIPQYQQVQQLFQKDAQIITPEALESVKVALARDEMEHNAETKRKAIPRKAAGQKWQDPTLADWPEND
YRLFCGDLGHEVNDDVLSRAFSQFPSFNMARVVRYKGTGKTKGYGFVSFANPLDLTTALKEMNGKYVGNRPIKLRKNKWKDRIDYEALQRLKNKSEKSSKIQKKSVLHSP
VTQIRLSPFRFSSAGSKISPSLAQICRSRVRCPRLDQPRLVVVRPDPLLASVQISSSSPSSPSWARSSLVFPSNRLERARSGLIPALFIKIKKKDNRRGFWAPLFLRFEE
EEDPQLQTDDVEKIATAANRAGRRHLADRSTATTDRSTTTASDLTRFHCKLDGGSMSATDLRG