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Spg029580 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg029580
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGag/pol protein
Genome locationscaffold2:20673946..20680411
RNA-Seq ExpressionSpg029580
SyntenySpg029580
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046800.1 gag/pol protein [Cucumis melo var. makuwa]1.9e-0960.94Show/hide
Query:  VDRAGTLSQSCPSQLLREPQRSGRVVNQPNEYCKSLTGTLIVIPNDNIEDPMTFNQEMDDMDKD
        VD   T  QS PSQLLR P+RSGRVV++PN Y   LT T +VIP+D IEDP+ F Q M+D+DKD
Subjt:  VDRAGTLSQSCPSQLLREPQRSGRVVNQPNEYCKSLTGTLIVIPNDNIEDPMTFNQEMDDMDKD
KAA0050437.1 gag/pol protein [Cucumis melo var. makuwa]1.9e-0957.81Show/hide
Query:  VDRAGTLSQSCPSQLLREPQRSGRVVNQPNEYCKSLTGTLIVIPNDNIEDPMTFNQEMDDMDKD
        VD   T  QS PSQ LR PQRSGR+V+QPN Y   LT T +VIP+D +EDP+++ Q M+D+DKD
Subjt:  VDRAGTLSQSCPSQLLREPQRSGRVVNQPNEYCKSLTGTLIVIPNDNIEDPMTFNQEMDDMDKD
KAA0054700.1 gag/pol protein [Cucumis melo var. makuwa]6.6e-1059.38Show/hide
Query:  VDRAGTLSQSCPSQLLREPQRSGRVVNQPNEYCKSLTGTLIVIPNDNIEDPMTFNQEMDDMDKD
        VD   T  QS PSQLLR PQ SGRVV+QPN Y   LTGT +VIP+D +EDP+++ Q M+D+D D
Subjt:  VDRAGTLSQSCPSQLLREPQRSGRVVNQPNEYCKSLTGTLIVIPNDNIEDPMTFNQEMDDMDKD
KAA0065400.1 gag/pol protein [Cucumis melo var. makuwa]1.1e-0959.38Show/hide
Query:  VDRAGTLSQSCPSQLLREPQRSGRVVNQPNEYCKSLTGTLIVIPNDNIEDPMTFNQEMDDMDKD
        VD   T  QS PSQ LR P+RSGR+V+QPN Y   LT T IVIP+D +EDP+++NQ M+D+DKD
Subjt:  VDRAGTLSQSCPSQLLREPQRSGRVVNQPNEYCKSLTGTLIVIPNDNIEDPMTFNQEMDDMDKD
KAA0067617.1 gag/pol protein [Cucumis melo var. makuwa]3.3e-0957.81Show/hide
Query:  VDRAGTLSQSCPSQLLREPQRSGRVVNQPNEYCKSLTGTLIVIPNDNIEDPMTFNQEMDDMDKD
        VD   T  QS PSQ LR P+RSGR+V+QPN Y   LT TL+VIP+D +EDP ++ Q M+D+DKD
Subjt:  VDRAGTLSQSCPSQLLREPQRSGRVVNQPNEYCKSLTGTLIVIPNDNIEDPMTFNQEMDDMDKD
TrEMBL top hitse value%identityAlignment
A0A5A7TUI8 Gag/pol protein9.3e-1060.94Show/hide
Query:  VDRAGTLSQSCPSQLLREPQRSGRVVNQPNEYCKSLTGTLIVIPNDNIEDPMTFNQEMDDMDKD
        VD   T  QS PSQLLR P+RSGRVV++PN Y   LT T +VIP+D IEDP+ F Q M+D+DKD
Subjt:  VDRAGTLSQSCPSQLLREPQRSGRVVNQPNEYCKSLTGTLIVIPNDNIEDPMTFNQEMDDMDKD
A0A5A7U7T0 Gag/pol protein9.3e-1057.81Show/hide
Query:  VDRAGTLSQSCPSQLLREPQRSGRVVNQPNEYCKSLTGTLIVIPNDNIEDPMTFNQEMDDMDKD
        VD   T  QS PSQ LR PQRSGR+V+QPN Y   LT T +VIP+D +EDP+++ Q M+D+DKD
Subjt:  VDRAGTLSQSCPSQLLREPQRSGRVVNQPNEYCKSLTGTLIVIPNDNIEDPMTFNQEMDDMDKD
A0A5A7UHE8 Gag/pol protein3.2e-1059.38Show/hide
Query:  VDRAGTLSQSCPSQLLREPQRSGRVVNQPNEYCKSLTGTLIVIPNDNIEDPMTFNQEMDDMDKD
        VD   T  QS PSQLLR PQ SGRVV+QPN Y   LTGT +VIP+D +EDP+++ Q M+D+D D
Subjt:  VDRAGTLSQSCPSQLLREPQRSGRVVNQPNEYCKSLTGTLIVIPNDNIEDPMTFNQEMDDMDKD
A0A5A7VDX8 Gag/pol protein5.4e-1059.38Show/hide
Query:  VDRAGTLSQSCPSQLLREPQRSGRVVNQPNEYCKSLTGTLIVIPNDNIEDPMTFNQEMDDMDKD
        VD   T  QS PSQ LR P+RSGR+V+QPN Y   LT T IVIP+D +EDP+++NQ M+D+DKD
Subjt:  VDRAGTLSQSCPSQLLREPQRSGRVVNQPNEYCKSLTGTLIVIPNDNIEDPMTFNQEMDDMDKD
A0A5A7VKD2 Gag/pol protein1.6e-0957.81Show/hide
Query:  VDRAGTLSQSCPSQLLREPQRSGRVVNQPNEYCKSLTGTLIVIPNDNIEDPMTFNQEMDDMDKD
        VD   T  QS PSQ LR P+RSGR+V+QPN Y   LT TL+VIP+D +EDP ++ Q M+D+DKD
Subjt:  VDRAGTLSQSCPSQLLREPQRSGRVVNQPNEYCKSLTGTLIVIPNDNIEDPMTFNQEMDDMDKD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAATGGAGTTGGCTGGTTTGGACATGCAAAAACAGAAAGTAAATTCTCTCAAAAACACCATGTTTTCTCTCATGTTTTTCTTGGGGGTTTCAAGCTTTCTTCCCAC
AAATTCATCACTCATAAGCTCCCACAAGCTCGTTCTAAGGCCGGAGAATAGCGGGGAAGATCTCGGTGATCGTCCACAACTCGATCGTGTTGAGAATCATCCAACCAAAT
GCTCCAATCGAGCTCCAAAAGTGTCTCGTACACTCCTTCAATTGAGTCTGAAAAATTTGGGAGTCAATAGACAAGAAATTGTGGGATTGGAATTCCGTAATTCCGTAAAG
CGGAAGCGTGATTGGGACCGATTCTGCGAACACCACCACTATGGCTACATCGGTATGACTCTGAGACTTCTAGAGGCAGGAGACTGGTGGGAGTCTAGAGGAAGCCTTGA
GGGGAATTCTCTGAGACCCCCATTCGGTCTTGCCCCTGAAATGGATACCCCCACCCGCATGTCTCCTACATGGATGCTTTGGATCATTGCATCTGTATCGAATACAAGGT
GGGTCGTATCAGATAGTGTCACCAGGATAAGAGGAGTAGCAGTTGATCACCCATTTGGTTACTGTTGCTCTAAACCTCTGAAGTATCGTTGCAAAAGAATTATGATTCTT
AGGGGCCCACTAATCACGGTTGTTGATCGAGCTGGAACATTGAGTCAGTCCTGTCCTTCTCAATTGTTGAGAGAGCCTCAACGTAGTGGGAGGGTTGTTAATCAACCTAA
TGAATACTGTAAGAGTTTAACTGGAACTCTGATTGTCATACCTAATGACAATATCGAGGATCCAATGACCTTTAATCAGGAAATGGATGACATGGATAAAGACAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTAATGGAGTTGGCTGGTTTGGACATGCAAAAACAGAAAGTAAATTCTCTCAAAAACACCATGTTTTCTCTCATGTTTTTCTTGGGGGTTTCAAGCTTTCTTCCCAC
AAATTCATCACTCATAAGCTCCCACAAGCTCGTTCTAAGGCCGGAGAATAGCGGGGAAGATCTCGGTGATCGTCCACAACTCGATCGTGTTGAGAATCATCCAACCAAAT
GCTCCAATCGAGCTCCAAAAGTGTCTCGTACACTCCTTCAATTGAGTCTGAAAAATTTGGGAGTCAATAGACAAGAAATTGTGGGATTGGAATTCCGTAATTCCGTAAAG
CGGAAGCGTGATTGGGACCGATTCTGCGAACACCACCACTATGGCTACATCGGTATGACTCTGAGACTTCTAGAGGCAGGAGACTGGTGGGAGTCTAGAGGAAGCCTTGA
GGGGAATTCTCTGAGACCCCCATTCGGTCTTGCCCCTGAAATGGATACCCCCACCCGCATGTCTCCTACATGGATGCTTTGGATCATTGCATCTGTATCGAATACAAGGT
GGGTCGTATCAGATAGTGTCACCAGGATAAGAGGAGTAGCAGTTGATCACCCATTTGGTTACTGTTGCTCTAAACCTCTGAAGTATCGTTGCAAAAGAATTATGATTCTT
AGGGGCCCACTAATCACGGTTGTTGATCGAGCTGGAACATTGAGTCAGTCCTGTCCTTCTCAATTGTTGAGAGAGCCTCAACGTAGTGGGAGGGTTGTTAATCAACCTAA
TGAATACTGTAAGAGTTTAACTGGAACTCTGATTGTCATACCTAATGACAATATCGAGGATCCAATGACCTTTAATCAGGAAATGGATGACATGGATAAAGACAATTGA
Protein sequenceShow/hide protein sequence
MVMELAGLDMQKQKVNSLKNTMFSLMFFLGVSSFLPTNSSLISSHKLVLRPENSGEDLGDRPQLDRVENHPTKCSNRAPKVSRTLLQLSLKNLGVNRQEIVGLEFRNSVK
RKRDWDRFCEHHHYGYIGMTLRLLEAGDWWESRGSLEGNSLRPPFGLAPEMDTPTRMSPTWMLWIIASVSNTRWVVSDSVTRIRGVAVDHPFGYCCSKPLKYRCKRIMIL
RGPLITVVDRAGTLSQSCPSQLLREPQRSGRVVNQPNEYCKSLTGTLIVIPNDNIEDPMTFNQEMDDMDKDN