; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg029612 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg029612
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H
Genome locationscaffold2:23366630..23370236
RNA-Seq ExpressionSpg029612
SyntenySpg029612
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MQL77781.1 hypothetical protein [Colocasia esculenta]7.7e-1738.04Show/hide
Query:  IDQKYMSVEELLKSKKLEREHKRPSSSDRDSRKDKKQRTDDHGQGRPDHGRGRLDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRD
        I Q++ + EE L +          S++++  + DKK+ +D+        GR   D    L+ F  YTP ++  EQIL EIRN   L  P++++S+P  RD
Subjt:  IDQKYMSVEELLKSKKLEREHKRPSSSDRDSRKDKKQRTDDHGQGRPDHGRGRLDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRD

Query:  KSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQ
        +++YC FHRDHGH T  C QLKDEIE LI+ GYL  F  + E   R    T + P K++   Q
Subjt:  KSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQ

XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]2.8e-1943.36Show/hide
Query:  QKYMSVEELLKSKKLEREHKRPSSSDRDSRKDKKQRTDDHGQGRPDHGRGRLDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKS
        Q+YMS  E   SK+ E   KR           K++R+ D  QG     R R  Q D  +KFE+YT T++P EQ+LMEI+N  LL  P ++ ++   R K 
Subjt:  QKYMSVEELLKSKKLEREHKRPSSSDRDSRKDKKQRTDDHGQGRPDHGRGRLDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKS

Query:  QYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQ
        +YCLFH DHGH+T++C  LK+E+E LI  GYLKE+  + +A Q
Subjt:  QYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQ

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]3.6e-2245.45Show/hide
Query:  QKYMSVEELLKSKKLEREHKRPSSSDRDSRKDKKQRTDDHGQGRPDHGRGRLDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKS
        Q+YMS  E   SK+ E + KR           K++R+ D  QG     R R  Q D  +KFE+YTPT++P EQ+LMEI++  LL  P ++K++   R K 
Subjt:  QKYMSVEELLKSKKLEREHKRPSSSDRDSRKDKKQRTDDHGQGRPDHGRGRLDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKS

Query:  QYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQ
        +YCLFHRDHGH+T++C  LK+E+E LIR GYLKE+  + +A Q
Subjt:  QYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQ

XP_022159192.1 uncharacterized protein LOC111025612 [Momordica charantia]1.1e-2039.75Show/hide
Query:  QKYMSVEEL------LKSKKLEREHKRPSSSDRDSRKDKKQRTDDHGQGRPDHGRGRLDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNP
        QKYMS EE       L+ K+ +++ +R       S+ +K+ R               + Q D  +KFE+YTPT++P EQ+LMEI++  LL  P  +K+ P
Subjt:  QKYMSVEEL------LKSKKLEREHKRPSSSDRDSRKDKKQRTDDHGQGRPDHGRGRLDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNP

Query:  DNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGK
        + R K +YCLFHRDHGH+T +C  LK+E+E LIR GYLKE+    +A      P R++  K
Subjt:  DNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGK

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]2.2e-1943.36Show/hide
Query:  QKYMSVEELLKSKKLEREHKRPSSSDRDSRKDKKQRTDDHGQGRPDHGRGRLDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKS
        Q+YMS  E   SK+ E + KR           K++R+ D  QG     R R  Q D  +KFE+YTPT++P EQ+LMEI++  LL  P ++K     R K 
Subjt:  QKYMSVEELLKSKKLEREHKRPSSSDRDSRKDKKQRTDDHGQGRPDHGRGRLDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKS

Query:  QYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQ
        +YCLFHRDH H+T++   LK+E+E LIR GYL+E+  + +A Q
Subjt:  QYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQ

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128051.4e-1943.36Show/hide
Query:  QKYMSVEELLKSKKLEREHKRPSSSDRDSRKDKKQRTDDHGQGRPDHGRGRLDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKS
        Q+YMS  E   SK+ E   KR           K++R+ D  QG     R R  Q D  +KFE+YT T++P EQ+LMEI+N  LL  P ++ ++   R K 
Subjt:  QKYMSVEELLKSKKLEREHKRPSSSDRDSRKDKKQRTDDHGQGRPDHGRGRLDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKS

Query:  QYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQ
        +YCLFH DHGH+T++C  LK+E+E LI  GYLKE+  + +A Q
Subjt:  QYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQ

A0A6J1DWY0 uncharacterized protein LOC1110252931.7e-2245.45Show/hide
Query:  QKYMSVEELLKSKKLEREHKRPSSSDRDSRKDKKQRTDDHGQGRPDHGRGRLDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKS
        Q+YMS  E   SK+ E + KR           K++R+ D  QG     R R  Q D  +KFE+YTPT++P EQ+LMEI++  LL  P ++K++   R K 
Subjt:  QKYMSVEELLKSKKLEREHKRPSSSDRDSRKDKKQRTDDHGQGRPDHGRGRLDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKS

Query:  QYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQ
        +YCLFHRDHGH+T++C  LK+E+E LIR GYLKE+  + +A Q
Subjt:  QYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQ

A0A6J1DYL6 uncharacterized protein LOC1110257851.0e-1943.36Show/hide
Query:  QKYMSVEELLKSKKLEREHKRPSSSDRDSRKDKKQRTDDHGQGRPDHGRGRLDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKS
        Q+YMS  E   SK+ E + KR           K++R+ D  QG     R R  Q D  +KFE+YTPT++P EQ+LMEI++  LL  P ++K     R K 
Subjt:  QKYMSVEELLKSKKLEREHKRPSSSDRDSRKDKKQRTDDHGQGRPDHGRGRLDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKS

Query:  QYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQ
        +YCLFHRDH H+T++   LK+E+E LIR GYL+E+  + +A Q
Subjt:  QYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQ

A0A6J1DZ52 uncharacterized protein LOC1110256125.5e-2139.75Show/hide
Query:  QKYMSVEEL------LKSKKLEREHKRPSSSDRDSRKDKKQRTDDHGQGRPDHGRGRLDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNP
        QKYMS EE       L+ K+ +++ +R       S+ +K+ R               + Q D  +KFE+YTPT++P EQ+LMEI++  LL  P  +K+ P
Subjt:  QKYMSVEEL------LKSKKLEREHKRPSSSDRDSRKDKKQRTDDHGQGRPDHGRGRLDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNP

Query:  DNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGK
        + R K +YCLFHRDHGH+T +C  LK+E+E LIR GYLKE+    +A      P R++  K
Subjt:  DNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGK

A0A7N2N013 Ribonuclease H2.4e-1641.67Show/hide
Query:  KYMSVEELLKSKKLEREHKRPSSSDR--DSRKDKKQRTDDHGQGRPDHGRGRLDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDK
        KYM+ E+ L S++      RP   DR  DSR+D+ ++    G  R D  R +   G    +F  +TP + P +Q+LM+I++   L  P KLKS+P  R +
Subjt:  KYMSVEELLKSKKLEREHKRPSSSDR--DSRKDKKQRTDDHGQGRPDHGRGRLDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDK

Query:  SQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQ
         +YC FHRDHGH T +C  LK +IEALIR G L++F  K   DQ
Subjt:  SQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGGAATTGGCTACAAAATGGGAGCCCTCCTCACCCTTGCATTTCACGATTTTCTTGAACCAGGCAATTTTGGACCACCCGACGCACAAGGAGCTGACGAGGACAA
CCGGGCAGAAATAGGGCTGAGAGATGGATCCCAGAGGCAAAACCAGCAAGCGGGACAGGTCAAGACCGAAGGGGTCGGGCGCCTTGCCCGACCCCCCTACTCGGCCCGCT
TGCGCGGGCCGAGTCCCACCGACTCCGCTCGATCCCTGCAGTCTTCAGCCGCCCCGGTTCCGCCTGTTGGCGCCGTCTGTGGGGAAGAAAGCTTGCCAAATCTGCATATC
GGTCATTCCATGAGTAAGGGGATGGAGAAGAGAATTCTAGACATAAACACAGAGAATTCGGATGGTGACCGCCACCAGCGGAGGTCACGAGAAGAAGGCCGAGATCGGCC
TCGGACTGAATCTCCTCGTCCTCGGTCTCCACTGCCCTCATCCCGAGAGAAGCAAGCTGATCTCAAATTTGCTACTCTTGAAAACAAAGTAAGTGCGATGGATCATAATT
TGTCCAGGATACTTCGTATCTTGGATAAACCTGGTCCTAGCACTAAAACCCCTGACGAGAGGCTGGTTAGGGATCCGAGGAAGGGGAAGGAGCCCATGGAGCACACTGCA
GAATCGGAGACGAGATCGAAGGGAAAGAAGACTAGCAGCATGACCAGCAAGGTCAGGGGGCTCAAGCCTACTGATCGTATGATTTCGAGGAGCCCAGAGTCAAGCACACT
TAAGGGGCGTGACTACACAGTTTCTACCCCAAGCTATGGTCATACTAAGACAGACCTGAGGAATCTGATCGAGGAGAAGCGCAGAAGTGCCAAAACTGCCGAATCCGAGG
CCAGGGCTGCCGAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCTAGGTTAGCTGAGGCCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAGAAGGACAGCCTCCCTTGGAAG
ACTGAGCTTCTTAACGCACTAAAGGAACTTGGAAATCCACAGGGAGACCTACCTAAGTTGAAAGACTCAGGAACACAAGACTTGGAAGAATTGATCGACCAAAAGTACAT
GAGCGTAGAGGAGTTGCTCAAATCAAAGAAGTTAGAACGTGAACACAAGAGGCCTTCTTCATCTGACCGCGACAGTAGGAAGGACAAAAAGCAGCGGACCGACGACCATG
GCCAAGGCCGACCAGACCATGGCCGAGGCCGACTAGACCAAGGAGACTACTTGAAGAAGTTTGAAAGGTACACCCCTACTTCAATCCCACAGGAGCAGATCTTGATGGAG
ATAAGGAATACAAACCTGCTCAACGCGCCCAGGAAGCTGAAGTCCAATCCTGACAACAGAGACAAGAGCCAGTATTGCCTCTTTCATCGAGATCATGGACATTCAACTAG
GAACTGCATTCAGCTAAAGGACGAGATTGAAGCGCTGATTCGGAACGGATACCTGAAGGAGTTCACCACTAAGGCCGAGGCAGACCAGAGGTGGCCGAGGCCGACCAGAG
ACGACCCAGGCAAAGACAAGGGTGGACCTCAACTGGAAATTCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGGAATTGGCTACAAAATGGGAGCCCTCCTCACCCTTGCATTTCACGATTTTCTTGAACCAGGCAATTTTGGACCACCCGACGCACAAGGAGCTGACGAGGACAA
CCGGGCAGAAATAGGGCTGAGAGATGGATCCCAGAGGCAAAACCAGCAAGCGGGACAGGTCAAGACCGAAGGGGTCGGGCGCCTTGCCCGACCCCCCTACTCGGCCCGCT
TGCGCGGGCCGAGTCCCACCGACTCCGCTCGATCCCTGCAGTCTTCAGCCGCCCCGGTTCCGCCTGTTGGCGCCGTCTGTGGGGAAGAAAGCTTGCCAAATCTGCATATC
GGTCATTCCATGAGTAAGGGGATGGAGAAGAGAATTCTAGACATAAACACAGAGAATTCGGATGGTGACCGCCACCAGCGGAGGTCACGAGAAGAAGGCCGAGATCGGCC
TCGGACTGAATCTCCTCGTCCTCGGTCTCCACTGCCCTCATCCCGAGAGAAGCAAGCTGATCTCAAATTTGCTACTCTTGAAAACAAAGTAAGTGCGATGGATCATAATT
TGTCCAGGATACTTCGTATCTTGGATAAACCTGGTCCTAGCACTAAAACCCCTGACGAGAGGCTGGTTAGGGATCCGAGGAAGGGGAAGGAGCCCATGGAGCACACTGCA
GAATCGGAGACGAGATCGAAGGGAAAGAAGACTAGCAGCATGACCAGCAAGGTCAGGGGGCTCAAGCCTACTGATCGTATGATTTCGAGGAGCCCAGAGTCAAGCACACT
TAAGGGGCGTGACTACACAGTTTCTACCCCAAGCTATGGTCATACTAAGACAGACCTGAGGAATCTGATCGAGGAGAAGCGCAGAAGTGCCAAAACTGCCGAATCCGAGG
CCAGGGCTGCCGAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCTAGGTTAGCTGAGGCCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAGAAGGACAGCCTCCCTTGGAAG
ACTGAGCTTCTTAACGCACTAAAGGAACTTGGAAATCCACAGGGAGACCTACCTAAGTTGAAAGACTCAGGAACACAAGACTTGGAAGAATTGATCGACCAAAAGTACAT
GAGCGTAGAGGAGTTGCTCAAATCAAAGAAGTTAGAACGTGAACACAAGAGGCCTTCTTCATCTGACCGCGACAGTAGGAAGGACAAAAAGCAGCGGACCGACGACCATG
GCCAAGGCCGACCAGACCATGGCCGAGGCCGACTAGACCAAGGAGACTACTTGAAGAAGTTTGAAAGGTACACCCCTACTTCAATCCCACAGGAGCAGATCTTGATGGAG
ATAAGGAATACAAACCTGCTCAACGCGCCCAGGAAGCTGAAGTCCAATCCTGACAACAGAGACAAGAGCCAGTATTGCCTCTTTCATCGAGATCATGGACATTCAACTAG
GAACTGCATTCAGCTAAAGGACGAGATTGAAGCGCTGATTCGGAACGGATACCTGAAGGAGTTCACCACTAAGGCCGAGGCAGACCAGAGGTGGCCGAGGCCGACCAGAG
ACGACCCAGGCAAAGACAAGGGTGGACCTCAACTGGAAATTCATTGA
Protein sequenceShow/hide protein sequence
MVGIGYKMGALLTLAFHDFLEPGNFGPPDAQGADEDNRAEIGLRDGSQRQNQQAGQVKTEGVGRLARPPYSARLRGPSPTDSARSLQSSAAPVPPVGAVCGEESLPNLHI
GHSMSKGMEKRILDINTENSDGDRHQRRSREEGRDRPRTESPRPRSPLPSSREKQADLKFATLENKVSAMDHNLSRILRILDKPGPSTKTPDERLVRDPRKGKEPMEHTA
ESETRSKGKKTSSMTSKVRGLKPTDRMISRSPESSTLKGRDYTVSTPSYGHTKTDLRNLIEEKRRSAKTAESEARAAEAEARAAEAEARLAEAEARLAEAEAKKDSLPWK
TELLNALKELGNPQGDLPKLKDSGTQDLEELIDQKYMSVEELLKSKKLEREHKRPSSSDRDSRKDKKQRTDDHGQGRPDHGRGRLDQGDYLKKFERYTPTSIPQEQILME
IRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDPGKDKGGPQLEIH