| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_022133415.1 RNA-binding protein 39 isoform X1 [Momordica charantia] | 8.6e-59 | 89.86 | Show/hide |
Query: RMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGF---------QMAIALSGQLLLGQPVMVKPSEAEKN
RMKEKKDMVEPEADPERDQRTVFAYQMPLKATERD YEFFSKAGKVRDVRLIMDRNSRRSKGVG+ MAIALSGQLLLGQPVMVKPSEAEKN
Subjt: RMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGF---------QMAIALSGQLLLGQPVMVKPSEAEKN
Query: LVQSITLGASGAGPYGAVDRKLYVGNLHFNMTETHLRE
LVQS T GASGAGPYGAVDRKLYVGNLHFNMTETHLRE
Subjt: LVQSITLGASGAGPYGAVDRKLYVGNLHFNMTETHLRE
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| XP_022133416.1 RNA-binding protein 39 isoform X2 [Momordica charantia] | 8.6e-59 | 89.86 | Show/hide |
Query: RMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGF---------QMAIALSGQLLLGQPVMVKPSEAEKN
RMKEKKDMVEPEADPERDQRTVFAYQMPLKATERD YEFFSKAGKVRDVRLIMDRNSRRSKGVG+ MAIALSGQLLLGQPVMVKPSEAEKN
Subjt: RMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGF---------QMAIALSGQLLLGQPVMVKPSEAEKN
Query: LVQSITLGASGAGPYGAVDRKLYVGNLHFNMTETHLRE
LVQS T GASGAGPYGAVDRKLYVGNLHFNMTETHLRE
Subjt: LVQSITLGASGAGPYGAVDRKLYVGNLHFNMTETHLRE
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| XP_038881755.1 RNA-binding protein 39 isoform X1 [Benincasa hispida] | 8.6e-59 | 89.86 | Show/hide |
Query: RMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGF---------QMAIALSGQLLLGQPVMVKPSEAEKN
RMKEKKDMVEPEADPERDQRTVFAYQMPLKATERD YEFFSKAGKVRDVRLIMDRNSRRSKGVG+ MAIALSGQLLLGQPVMVKPSEAEKN
Subjt: RMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGF---------QMAIALSGQLLLGQPVMVKPSEAEKN
Query: LVQSITLGASGAGPYGAVDRKLYVGNLHFNMTETHLRE
LVQS T GASGAGPYGAVDRKLYVGNLHFNMTETHLRE
Subjt: LVQSITLGASGAGPYGAVDRKLYVGNLHFNMTETHLRE
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| XP_038881757.1 RNA-binding protein 39 isoform X2 [Benincasa hispida] | 8.6e-59 | 89.86 | Show/hide |
Query: RMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGF---------QMAIALSGQLLLGQPVMVKPSEAEKN
RMKEKKDMVEPEADPERDQRTVFAYQMPLKATERD YEFFSKAGKVRDVRLIMDRNSRRSKGVG+ MAIALSGQLLLGQPVMVKPSEAEKN
Subjt: RMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGF---------QMAIALSGQLLLGQPVMVKPSEAEKN
Query: LVQSITLGASGAGPYGAVDRKLYVGNLHFNMTETHLRE
LVQS T GASGAGPYGAVDRKLYVGNLHFNMTETHLRE
Subjt: LVQSITLGASGAGPYGAVDRKLYVGNLHFNMTETHLRE
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| XP_038881758.1 probable RNA-binding protein 23 isoform X3 [Benincasa hispida] | 8.6e-59 | 89.86 | Show/hide |
Query: RMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGF---------QMAIALSGQLLLGQPVMVKPSEAEKN
RMKEKKDMVEPEADPERDQRTVFAYQMPLKATERD YEFFSKAGKVRDVRLIMDRNSRRSKGVG+ MAIALSGQLLLGQPVMVKPSEAEKN
Subjt: RMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGF---------QMAIALSGQLLLGQPVMVKPSEAEKN
Query: LVQSITLGASGAGPYGAVDRKLYVGNLHFNMTETHLRE
LVQS T GASGAGPYGAVDRKLYVGNLHFNMTETHLRE
Subjt: LVQSITLGASGAGPYGAVDRKLYVGNLHFNMTETHLRE
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A6J1BV17 RNA-binding protein 39 isoform X2 | 4.2e-59 | 89.86 | Show/hide |
Query: RMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGF---------QMAIALSGQLLLGQPVMVKPSEAEKN
RMKEKKDMVEPEADPERDQRTVFAYQMPLKATERD YEFFSKAGKVRDVRLIMDRNSRRSKGVG+ MAIALSGQLLLGQPVMVKPSEAEKN
Subjt: RMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGF---------QMAIALSGQLLLGQPVMVKPSEAEKN
Query: LVQSITLGASGAGPYGAVDRKLYVGNLHFNMTETHLRE
LVQS T GASGAGPYGAVDRKLYVGNLHFNMTETHLRE
Subjt: LVQSITLGASGAGPYGAVDRKLYVGNLHFNMTETHLRE
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| A0A6J1BV68 RNA-binding protein 39 isoform X1 | 4.2e-59 | 89.86 | Show/hide |
Query: RMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGF---------QMAIALSGQLLLGQPVMVKPSEAEKN
RMKEKKDMVEPEADPERDQRTVFAYQMPLKATERD YEFFSKAGKVRDVRLIMDRNSRRSKGVG+ MAIALSGQLLLGQPVMVKPSEAEKN
Subjt: RMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGF---------QMAIALSGQLLLGQPVMVKPSEAEKN
Query: LVQSITLGASGAGPYGAVDRKLYVGNLHFNMTETHLRE
LVQS T GASGAGPYGAVDRKLYVGNLHFNMTETHLRE
Subjt: LVQSITLGASGAGPYGAVDRKLYVGNLHFNMTETHLRE
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| A0A6J1BWL9 RNA-binding protein 39 isoform X3 | 4.2e-59 | 89.86 | Show/hide |
Query: RMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGF---------QMAIALSGQLLLGQPVMVKPSEAEKN
RMKEKKDMVEPEADPERDQRTVFAYQMPLKATERD YEFFSKAGKVRDVRLIMDRNSRRSKGVG+ MAIALSGQLLLGQPVMVKPSEAEKN
Subjt: RMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGF---------QMAIALSGQLLLGQPVMVKPSEAEKN
Query: LVQSITLGASGAGPYGAVDRKLYVGNLHFNMTETHLRE
LVQS T GASGAGPYGAVDRKLYVGNLHFNMTETHLRE
Subjt: LVQSITLGASGAGPYGAVDRKLYVGNLHFNMTETHLRE
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| A0A6J1ILK9 RNA-binding protein 39-like isoform X3 | 1.2e-58 | 89.13 | Show/hide |
Query: RMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGF---------QMAIALSGQLLLGQPVMVKPSEAEKN
RMKEKKDMVEPEADPERDQRTVFAYQMPLKATERD YEFFSKAGKVRDVRLIMDRNSRRSKGVG+ MAIALSGQLL GQPVMVKPSEAEKN
Subjt: RMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGF---------QMAIALSGQLLLGQPVMVKPSEAEKN
Query: LVQSITLGASGAGPYGAVDRKLYVGNLHFNMTETHLRE
LVQS T GASGAGPYGAVDRKLYVGNLHFNMTETHLRE
Subjt: LVQSITLGASGAGPYGAVDRKLYVGNLHFNMTETHLRE
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| A0A6J1ISX3 RNA-binding protein 39-like isoform X1 | 1.2e-58 | 89.13 | Show/hide |
Query: RMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGF---------QMAIALSGQLLLGQPVMVKPSEAEKN
RMKEKKDMVEPEADPERDQRTVFAYQMPLKATERD YEFFSKAGKVRDVRLIMDRNSRRSKGVG+ MAIALSGQLL GQPVMVKPSEAEKN
Subjt: RMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGF---------QMAIALSGQLLLGQPVMVKPSEAEKN
Query: LVQSITLGASGAGPYGAVDRKLYVGNLHFNMTETHLRE
LVQS T GASGAGPYGAVDRKLYVGNLHFNMTETHLRE
Subjt: LVQSITLGASGAGPYGAVDRKLYVGNLHFNMTETHLRE
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O13845 RNA-binding protein rsd1 | 1.3e-17 | 39.86 | Show/hide |
Query: RGRMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGF---------QMAIALSGQLLLGQPVMVKPSEAE
R R +E+ + E ERD+RTVF Q+ + T R+ Y+FF +AG VRD +++ D+ S RSKGV + Q AIALSG+ LLG PV+V+ +EAE
Subjt: RGRMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGF---------QMAIALSGQLLLGQPVMVKPSEAE
Query: KNL----VQSITLGASGAGPYGAVDRKLYVGNLHFNMTETHLR
KN + AS P+ +L V N+HFN+T+ ++
Subjt: KNL----VQSITLGASGAGPYGAVDRKLYVGNLHFNMTETHLR
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| Q14498 RNA-binding protein 39 | 1.3e-22 | 45.58 | Show/hide |
Query: SPASFIRGRMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGF---------QMAIALSGQLLLGQPVMV
SP + ++E D + PE ERD RTVF Q+ + RD EFFS GKVRDVR+I DRNSRRSKG+ + +AI L+GQ +LG P++V
Subjt: SPASFIRGRMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGF---------QMAIALSGQLLLGQPVMV
Query: KPSEAEKNLVQSI--TLGASGAGPYGAVDRKLYVGNLHFNMTETHLR
+ S+AEKN ++ L AGP +LYVG+LHFN+TE LR
Subjt: KPSEAEKNLVQSI--TLGASGAGPYGAVDRKLYVGNLHFNMTETHLR
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| Q5RC80 RNA-binding protein 39 | 1.3e-22 | 45.58 | Show/hide |
Query: SPASFIRGRMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGF---------QMAIALSGQLLLGQPVMV
SP + ++E D + PE ERD RTVF Q+ + RD EFFS GKVRDVR+I DRNSRRSKG+ + +AI L+GQ +LG P++V
Subjt: SPASFIRGRMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGF---------QMAIALSGQLLLGQPVMV
Query: KPSEAEKNLVQSI--TLGASGAGPYGAVDRKLYVGNLHFNMTETHLR
+ S+AEKN ++ L AGP +LYVG+LHFN+TE LR
Subjt: KPSEAEKNLVQSI--TLGASGAGPYGAVDRKLYVGNLHFNMTETHLR
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| Q86U06 Probable RNA-binding protein 23 | 2.3e-22 | 44.9 | Show/hide |
Query: SPASFIRGRMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGF---------QMAIALSGQLLLGQPVMV
SP + ++E D + PE ERD RTVF Q+ + RD +FFS GKVRDVR+I DRNSRRSKG+ + +AI L+GQ LLG P++V
Subjt: SPASFIRGRMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGF---------QMAIALSGQLLLGQPVMV
Query: KPSEAEKNLVQSI--TLGASGAGPYGAVDRKLYVGNLHFNMTETHLR
+ S+AEKN + ++ L GP +LYVG+LHFN+TE LR
Subjt: KPSEAEKNLVQSI--TLGASGAGPYGAVDRKLYVGNLHFNMTETHLR
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| Q8VH51 RNA-binding protein 39 | 1.3e-22 | 45.58 | Show/hide |
Query: SPASFIRGRMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGF---------QMAIALSGQLLLGQPVMV
SP + ++E D + PE ERD RTVF Q+ + RD EFFS GKVRDVR+I DRNSRRSKG+ + +AI L+GQ +LG P++V
Subjt: SPASFIRGRMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGF---------QMAIALSGQLLLGQPVMV
Query: KPSEAEKNLVQSI--TLGASGAGPYGAVDRKLYVGNLHFNMTETHLR
+ S+AEKN ++ L AGP +LYVG+LHFN+TE LR
Subjt: KPSEAEKNLVQSI--TLGASGAGPYGAVDRKLYVGNLHFNMTETHLR
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G07350.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 5.8e-05 | 33.75 | Show/hide |
Query: PNTSPASFIRGRMKEKKDMVEP----EADPERDQRTVFAYQMPLKATERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGF
P+ SP RGR + P +D E +++ + + TERD + F+K GKV DV L++D +R S+G GF
Subjt: PNTSPASFIRGRMKEKKDMVEP----EADPERDQRTVFAYQMPLKATERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGF
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| AT2G16940.1 Splicing factor, CC1-like | 4.4e-45 | 70.14 | Show/hide |
Query: RGRMKEKK-DMVEPEADPERDQRTVFAYQMPLKATERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGF---------QMAIALSGQLLLGQPVMVKPSEA
R R K+KK D VEPEADPERDQRTVFAYQ+ L+ATERD YEFFS+AGKVRDVR+IMDR SRRS+G+G+ MAIALSGQ LLGQPVMVKPSEA
Subjt: RGRMKEKK-DMVEPEADPERDQRTVFAYQMPLKATERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGF---------QMAIALSGQLLLGQPVMVKPSEA
Query: EKNLVQSIT--LGASG-AGPYGAVDRKLYVGNLHFNMTETHLRE
EKNLVQS T GA G GPY R+LYVGNLH NM+E LR+
Subjt: EKNLVQSIT--LGASG-AGPYGAVDRKLYVGNLHFNMTETHLRE
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| AT2G16940.2 Splicing factor, CC1-like | 2.6e-45 | 68.71 | Show/hide |
Query: SFIRGRMKEKK-DMVEPEADPERDQRTVFAYQMPLKATERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGF---------QMAIALSGQLLLGQPVMVKP
++ R R K+KK D VEPEADPERDQRTVFAYQ+ L+ATERD YEFFS+AGKVRDVR+IMDR SRRS+G+G+ MAIALSGQ LLGQPVMVKP
Subjt: SFIRGRMKEKK-DMVEPEADPERDQRTVFAYQMPLKATERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGF---------QMAIALSGQLLLGQPVMVKP
Query: SEAEKNLVQSIT--LGASG-AGPYGAVDRKLYVGNLHFNMTETHLRE
SEAEKNLVQS T GA G GPY R+LYVGNLH NM+E LR+
Subjt: SEAEKNLVQSIT--LGASG-AGPYGAVDRKLYVGNLHFNMTETHLRE
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| AT2G16940.3 Splicing factor, CC1-like | 3.2e-43 | 62.8 | Show/hide |
Query: GIKPNTSPASFIRGRMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDAYEFFSKAGK---------VRDVRLIMDRNSRRSKGVGF---------QMA
G P + FIR + K K+D VEPEADPERDQRTVFAYQ+ L+ATERD YEFFS+AGK VRDVR+IMDR SRRS+G+G+ MA
Subjt: GIKPNTSPASFIRGRMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDAYEFFSKAGK---------VRDVRLIMDRNSRRSKGVGF---------QMA
Query: IALSGQLLLGQPVMVKPSEAEKNLVQSIT--LGASG-AGPYGAVDRKLYVGNLHFNMTETHLRE
IALSGQ LLGQPVMVKPSEAEKNLVQS T GA G GPY R+LYVGNLH NM+E LR+
Subjt: IALSGQLLLGQPVMVKPSEAEKNLVQSIT--LGASG-AGPYGAVDRKLYVGNLHFNMTETHLRE
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| AT5G09880.1 Splicing factor, CC1-like | 1.5e-48 | 75.36 | Show/hide |
Query: RMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGF---------QMAIALSGQLLLGQPVMVKPSEAEKN
R ++KKD EPEADPERDQRTVFAYQMPLKATERD YEFFSKAGKVRDVRLIMDRNSRRSKGVG+ MAIALSGQL LGQPVMVKPSEAEKN
Subjt: RMKEKKDMVEPEADPERDQRTVFAYQMPLKATERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGF---------QMAIALSGQLLLGQPVMVKPSEAEKN
Query: LVQSITLGASGAGPYGAVDRKLYVGNLHFNMTETHLRE
L QS + G GP DRKLYVGNLHFNM+E LR+
Subjt: LVQSITLGASGAGPYGAVDRKLYVGNLHFNMTETHLRE
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