; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg029660 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg029660
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H
Genome locationscaffold2:21319721..21322741
RNA-Seq ExpressionSpg029660
SyntenySpg029660
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]2.0e-2945.45Show/hide
Query:  EKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGQGRPDRAHTFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKS
        ++YMSA E   SK+ E   KR+          K++R+ +  +G     + R  +     KFEKYT T VP EQVLMEI+N  LLK+P RM +S  +R K 
Subjt:  EKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGQGRPDRAHTFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKS

Query:  QYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRAV
        +YCLFH DHGH+T++C  LK+E+E LI  GYLKE+V EPKA           T++G   + P REIRTI GGP    S RKRK   REAR   E   V
Subjt:  QYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRAV

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]2.5e-3246.97Show/hide
Query:  EKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGQGRPDRAHTFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKS
        ++YMSA E   SK+ E + KR+          K++R+ +  +G     + R  +     KFEKYTPT VP EQVLMEI++  LLK+P RMK+S  +R K 
Subjt:  EKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGQGRPDRAHTFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKS

Query:  QYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRAV
        +YCLFHRDHGH+T++C  LK+E+E LI+ GYLKE+V EPKA           T++G   + P REIRTI GGP    S RKRKA  REAR   E   V
Subjt:  QYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRAV

XP_022159192.1 uncharacterized protein LOC111025612 [Momordica charantia]8.9e-3044.72Show/hide
Query:  EKYMSAEEL------LKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGQGRPDRAHTFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSP
        +KYMSAEE       L+ K+++++ +RS      S+ +K+ R             G+ D      KFEKYTPT VP EQVLMEI++  LLK+P  MK+ P
Subjt:  EKYMSAEEL------LKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGQGRPDRAHTFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSP

Query:  DRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEP
        ++R K +YCLFHRDHGH+T +C  LK+E+E LI+ GYLKE+V + KA  ++            D + P REIRTI GG     S RKRKA  REAR  P
Subjt:  DRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEP

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]1.2e-2944.61Show/hide
Query:  EKYMSAEELLKS------KKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGQGRPDRAHTFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSP
        ++YMSA E   S      K+++++ +RS      SR +K+ R+           Q  P R     KFEKYTPT VP EQVLMEI++  LLK+P RMK   
Subjt:  EKYMSAEELLKS------KKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGQGRPDRAHTFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSP

Query:  DRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPE
         +R K +YCLFHRDH H+T++   LK+E+E LI+ GYL+E+V EPKA           T++G  ++ P REIRTI GGP    S+RKRKA  REAR   E
Subjt:  DRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPE

Query:  YRAV
           V
Subjt:  YRAV

XP_024041095.1 uncharacterized protein LOC112098853 [Citrus clementina]1.9e-2436.82Show/hide
Query:  EKYMSAEELLKSKKSER-EHKRSSTSDHDSRKDKKQRTDEGGRG---RP-DHGQGRPDRAHTFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPD
        EKY +AEE  K++  E+ E  +      D R+ +  R D+  R    RP +  + R  R     +F  +T    P+EQ+LM++RN  L + P  MK++P 
Subjt:  EKYMSAEELLKSKKSER-EHKRSSTSDHDSRKDKKQRTDEGGRG---RP-DHGQGRPDRAHTFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPD

Query:  RRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKE---EPLREIRTIFGGPAGGSSSRKRKAIAREARFE
        RR+ ++YC FH+DHGH T  C +LK++IE+L++ G L+E+V  P+       P     + G+ KE   E + ++  I+GGPA G S + RK +AR+AR E
Subjt:  RRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKE---EPLREIRTIFGGPAGGSSSRKRKAIAREARFE

Query:  P
        P
Subjt:  P

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128059.6e-3045.45Show/hide
Query:  EKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGQGRPDRAHTFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKS
        ++YMSA E   SK+ E   KR+          K++R+ +  +G     + R  +     KFEKYT T VP EQVLMEI+N  LLK+P RM +S  +R K 
Subjt:  EKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGQGRPDRAHTFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKS

Query:  QYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRAV
        +YCLFH DHGH+T++C  LK+E+E LI  GYLKE+V EPKA           T++G   + P REIRTI GGP    S RKRK   REAR   E   V
Subjt:  QYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRAV

A0A6J1DDR5 uncharacterized protein LOC1110201153.5e-2439.45Show/hide
Query:  ELIDQVDPPFTE-----EKYMSAEELLKSKKSEREHK-RSSTSDHDSRKDKKQRTDEG---GRGRPDHGQGRPDRAHTFGK-FEKYTPTAVPQEQVLMEI
        +L ++    FTE     +K +  +EL++ K    E K     +  D  K   +  D+G      R D+   R D  H   + +E+YTPT +P  ++L  I
Subjt:  ELIDQVDPPFTE-----EKYMSAEELLKSKKSEREHK-RSSTSDHDSRKDKKQRTDEG---GRGRPDHGQGRPDRAHTFGK-FEKYTPTAVPQEQVLMEI

Query:  RNT---GLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKA-EADQGWPRPRLTKDGRDKEEPLREIRTIFGGPA
          +    LLK P +++  P++R+K +YCLFHRDHGHST NC +LK +IE LIQ+ Y K+FVG+P++  A++   R R     R K+ P   I TIFGGP+
Subjt:  RNT---GLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKA-EADQGWPRPRLTKDGRDKEEPLREIRTIFGGPA

Query:  GGSSSRKRKAIAREARFE
        GG S  KRK +AREAR E
Subjt:  GGSSSRKRKAIAREARFE

A0A6J1DWY0 uncharacterized protein LOC1110252931.2e-3246.97Show/hide
Query:  EKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGQGRPDRAHTFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKS
        ++YMSA E   SK+ E + KR+          K++R+ +  +G     + R  +     KFEKYTPT VP EQVLMEI++  LLK+P RMK+S  +R K 
Subjt:  EKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGQGRPDRAHTFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKS

Query:  QYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRAV
        +YCLFHRDHGH+T++C  LK+E+E LI+ GYLKE+V EPKA           T++G   + P REIRTI GGP    S RKRKA  REAR   E   V
Subjt:  QYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRAV

A0A6J1DYL6 uncharacterized protein LOC1110257855.6e-3044.61Show/hide
Query:  EKYMSAEELLKS------KKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGQGRPDRAHTFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSP
        ++YMSA E   S      K+++++ +RS      SR +K+ R+           Q  P R     KFEKYTPT VP EQVLMEI++  LLK+P RMK   
Subjt:  EKYMSAEELLKS------KKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGQGRPDRAHTFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSP

Query:  DRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPE
         +R K +YCLFHRDH H+T++   LK+E+E LI+ GYL+E+V EPKA           T++G  ++ P REIRTI GGP    S+RKRKA  REAR   E
Subjt:  DRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPE

Query:  YRAV
           V
Subjt:  YRAV

A0A6J1DZ52 uncharacterized protein LOC1110256124.3e-3044.72Show/hide
Query:  EKYMSAEEL------LKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGQGRPDRAHTFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSP
        +KYMSAEE       L+ K+++++ +RS      S+ +K+ R             G+ D      KFEKYTPT VP EQVLMEI++  LLK+P  MK+ P
Subjt:  EKYMSAEEL------LKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGQGRPDRAHTFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSP

Query:  DRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEP
        ++R K +YCLFHRDHGH+T +C  LK+E+E LI+ GYLKE+V + KA  ++            D + P REIRTI GG     S RKRKA  REAR  P
Subjt:  DRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAATTTTGGACCACTCGACGCACAAGGAGCTGACGAGGACGTCCGGGCGAAAATAGGGCTGGGAAACCGACCCAGAGGAGGAACCGACCAAAGGGCCGGGCCAAC
TTGGCCCGACCCAAATGGTCGGCCTCGGCCCAAGGCCGAGGCCCACCATTCGGCCCGCTTGCGCGGGCCGAGCTCGGTCACCTCCTCTAGGTCCCCAATGTCGCTAGCCA
CCCCGGTTTCGCCTGGTTTGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCACGAGCAGTTGGCACCGTCTGTGGGGAAGAAAGCTTGCCAAATCTGCATATC
GGTCATTCCATGAGTAAGGGGATAGAGAAGGGAAATCAAGACATAAACACAGAAAATTCGGATGGTGACCGCCACCAGCGGAGGTCACGGGCTGAATCTCCTCGTCCTCG
GTCTCCACTGCCCTCATCCCGAGAGAAGCAAACTGATCTCAAATTCGCTGCTCTCGAAAACAAAGTAAGTGCGATGGATCAAAATTTGTCCAGGATACTTCGTATCTTGG
ATAAACCTGGTCCTAGCACTAGAACCCTTGATGAGAGGCTGGTTAGGGATCCGAGGAAGGGGAAGGAGCCCCTGGAGCGCACTGCAGAATCGGAGACGAGATCGAAGGGA
AAGAAGACTAGCAGCATGACCAGCAAGGTCAGGGGGCTCAAACCTACTGATCGTACGATTTTGAGGAGCCCAGAGTCAAGCACACTTAAGGGGCATGACTACACAGTTTC
TACCCCAAGCTATGGTCATACTAAGACAGACCTAAGGAATCTGATCGAGGAGAAGCGCAGAAGTGCCAAAACTGCCGAATCTGAGGCCAGGGCTGCCGAGGCCGAGGCCA
GGGCTGCCGAGGCCGAGGCCAGAGCAGCCGAGGCCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAGAAGGACAATCTCCCCTGGAAGACTGAGCTTCTGAATGCACTGAAG
GAGCTCGGAAATCCTCAGGGAGAACTACCCAAGTTAAAGGACTCAGGAGCACAAGACTTGGAAGAATTGATCGATCAAGTTGACCCGCCCTTCACAGAGGAAAAATACAT
GAGCGCAGAAGAGTTGCTCAAGTCAAAGAAATCAGAACGTGAACACAAGAGGTCTTCGACATCTGACCACGACAGTAGGAAGGATAAAAAGCAGCGGACCGACGAGGGAG
GCCGAGGCCGACCAGACCATGGCCAAGGCCGACCAGACCGAGCACATACCTTTGGTAAATTCGAGAAATATACACCAACAGCTGTTCCACAGGAGCAAGTATTGATGGAG
ATTCGAAATACGGGACTCCTGAAATTCCCGGGAAGGATGAAGTCAAGTCCCGATAGAAGAGACAAGAGCCAGTATTGTCTTTTCCATCGAGACCATGGACATTCAACTAG
GAATTGTATTCAGTTGAAGGATGAAATCGAAGCATTGATTCAGAACGGGTATTTGAAGGAGTTCGTCGGCGAGCCCAAGGCCGAGGCCGACCAGGGATGGCCGAGGCCGA
GGCTGACCAAGGATGGCCGAGACAAAGAAGAGCCCCTACGAGAGATCAGAACCATCTTTGGAGGACCAGCTGGAGGAAGTTCAAGCAGGAAGAGGAAAGCTATTGCCAGG
GAAGCAAGGTTCGAGCCAGAGTATCGAGCCGTTAAACCACAGAGGGCCGAGGCCGACCAGAGGATGAGCCGAGGCCGAGCAGGACACACTTCCACCGATACTGAATCTGA
ACTTATGGAGTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAAATTTTGGACCACTCGACGCACAAGGAGCTGACGAGGACGTCCGGGCGAAAATAGGGCTGGGAAACCGACCCAGAGGAGGAACCGACCAAAGGGCCGGGCCAAC
TTGGCCCGACCCAAATGGTCGGCCTCGGCCCAAGGCCGAGGCCCACCATTCGGCCCGCTTGCGCGGGCCGAGCTCGGTCACCTCCTCTAGGTCCCCAATGTCGCTAGCCA
CCCCGGTTTCGCCTGGTTTGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCACGAGCAGTTGGCACCGTCTGTGGGGAAGAAAGCTTGCCAAATCTGCATATC
GGTCATTCCATGAGTAAGGGGATAGAGAAGGGAAATCAAGACATAAACACAGAAAATTCGGATGGTGACCGCCACCAGCGGAGGTCACGGGCTGAATCTCCTCGTCCTCG
GTCTCCACTGCCCTCATCCCGAGAGAAGCAAACTGATCTCAAATTCGCTGCTCTCGAAAACAAAGTAAGTGCGATGGATCAAAATTTGTCCAGGATACTTCGTATCTTGG
ATAAACCTGGTCCTAGCACTAGAACCCTTGATGAGAGGCTGGTTAGGGATCCGAGGAAGGGGAAGGAGCCCCTGGAGCGCACTGCAGAATCGGAGACGAGATCGAAGGGA
AAGAAGACTAGCAGCATGACCAGCAAGGTCAGGGGGCTCAAACCTACTGATCGTACGATTTTGAGGAGCCCAGAGTCAAGCACACTTAAGGGGCATGACTACACAGTTTC
TACCCCAAGCTATGGTCATACTAAGACAGACCTAAGGAATCTGATCGAGGAGAAGCGCAGAAGTGCCAAAACTGCCGAATCTGAGGCCAGGGCTGCCGAGGCCGAGGCCA
GGGCTGCCGAGGCCGAGGCCAGAGCAGCCGAGGCCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAGAAGGACAATCTCCCCTGGAAGACTGAGCTTCTGAATGCACTGAAG
GAGCTCGGAAATCCTCAGGGAGAACTACCCAAGTTAAAGGACTCAGGAGCACAAGACTTGGAAGAATTGATCGATCAAGTTGACCCGCCCTTCACAGAGGAAAAATACAT
GAGCGCAGAAGAGTTGCTCAAGTCAAAGAAATCAGAACGTGAACACAAGAGGTCTTCGACATCTGACCACGACAGTAGGAAGGATAAAAAGCAGCGGACCGACGAGGGAG
GCCGAGGCCGACCAGACCATGGCCAAGGCCGACCAGACCGAGCACATACCTTTGGTAAATTCGAGAAATATACACCAACAGCTGTTCCACAGGAGCAAGTATTGATGGAG
ATTCGAAATACGGGACTCCTGAAATTCCCGGGAAGGATGAAGTCAAGTCCCGATAGAAGAGACAAGAGCCAGTATTGTCTTTTCCATCGAGACCATGGACATTCAACTAG
GAATTGTATTCAGTTGAAGGATGAAATCGAAGCATTGATTCAGAACGGGTATTTGAAGGAGTTCGTCGGCGAGCCCAAGGCCGAGGCCGACCAGGGATGGCCGAGGCCGA
GGCTGACCAAGGATGGCCGAGACAAAGAAGAGCCCCTACGAGAGATCAGAACCATCTTTGGAGGACCAGCTGGAGGAAGTTCAAGCAGGAAGAGGAAAGCTATTGCCAGG
GAAGCAAGGTTCGAGCCAGAGTATCGAGCCGTTAAACCACAGAGGGCCGAGGCCGACCAGAGGATGAGCCGAGGCCGAGCAGGACACACTTCCACCGATACTGAATCTGA
ACTTATGGAGTTTTAG
Protein sequenceShow/hide protein sequence
MGNFGPLDAQGADEDVRAKIGLGNRPRGGTDQRAGPTWPDPNGRPRPKAEAHHSARLRGPSSVTSSRSPMSLATPVSPGLSRNASEFLKTLGARAVGTVCGEESLPNLHI
GHSMSKGIEKGNQDINTENSDGDRHQRRSRAESPRPRSPLPSSREKQTDLKFAALENKVSAMDQNLSRILRILDKPGPSTRTLDERLVRDPRKGKEPLERTAESETRSKG
KKTSSMTSKVRGLKPTDRTILRSPESSTLKGHDYTVSTPSYGHTKTDLRNLIEEKRRSAKTAESEARAAEAEARAAEAEARAAEAEARLAEAEAKKDNLPWKTELLNALK
ELGNPQGELPKLKDSGAQDLEELIDQVDPPFTEEKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGQGRPDRAHTFGKFEKYTPTAVPQEQVLME
IRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAR
EARFEPEYRAVKPQRAEADQRMSRGRAGHTSTDTESELMEF