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Spg029716 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg029716
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold6:13429235..13435003
RNA-Seq ExpressionSpg029716
SyntenySpg029716
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060579.1 hypothetical protein E6C27_scaffold22G004510 [Cucumis melo var. makuwa]1.1e-2793.59Show/hide
Query:  LSDDSSPKDSIKSGHHPSSSSNTGSMVAIILLGILVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        LSDDSS KDSI SG+HPSS SNTGSMVAIILLGILV VLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Subjt:  LSDDSSPKDSIKSGHHPSSSSNTGSMVAIILLGILVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

KAE8650189.1 hypothetical protein Csa_011006, partial [Cucumis sativus]3.9e-2886.81Show/hide
Query:  SFTSSVSGPF-SALSDDSSPKDSIKSGHHPSSSSNTGSMVAIILLGILVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        SF++S+S  F SALSDDSS KDS  SG+HPSS S+TGSMVAIILLGILVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Subjt:  SFTSSVSGPF-SALSDDSSPKDSIKSGHHPSSSSNTGSMVAIILLGILVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

KAG7015450.1 hypothetical protein SDJN02_23086, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-2691.25Show/hide
Query:  SALSDDSSPKDSIKSGHHPSSSSNTGSMVAIILLGILVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        SALS+DSS KDSI SG H SSSS TGSMVAIILLG LVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Subjt:  SALSDDSSPKDSIKSGHHPSSSSNTGSMVAIILLGILVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

KAG7031355.1 hypothetical protein SDJN02_05395 [Cucurbita argyrosperma subsp. argyrosperma]4.3e-2784.62Show/hide
Query:  SFTSSVSGPF-SALSDDSSPKDSIKSGHHPSSSSNTGSMVAIILLGILVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        SF++ +S  F SALSDDS+PKDSIKSG+HPSS SNT SM+AIILLG+LVVV LSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Subjt:  SFTSSVSGPF-SALSDDSSPKDSIKSGHHPSSSSNTGSMVAIILLGILVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

XP_016901207.1 PREDICTED: uncharacterized protein LOC103493315 [Cucumis melo]6.0e-2987.91Show/hide
Query:  SFTSSVSGPF-SALSDDSSPKDSIKSGHHPSSSSNTGSMVAIILLGILVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        SF++S+S  F SALSDDSS KDSI SG+HPSS SNTGSMVAIILLGILV VLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Subjt:  SFTSSVSGPF-SALSDDSSPKDSIKSGHHPSSSSNTGSMVAIILLGILVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

TrEMBL top hitse value%identityAlignment
A0A0A0L5F0 Uncharacterized protein1.9e-2886.81Show/hide
Query:  SFTSSVSGPF-SALSDDSSPKDSIKSGHHPSSSSNTGSMVAIILLGILVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        SF++S+S  F SALSDDSS KDS  SG+HPSS S+TGSMVAIILLGILVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Subjt:  SFTSSVSGPF-SALSDDSSPKDSIKSGHHPSSSSNTGSMVAIILLGILVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

A0A1S4DZ07 uncharacterized protein LOC1034933152.9e-2987.91Show/hide
Query:  SFTSSVSGPF-SALSDDSSPKDSIKSGHHPSSSSNTGSMVAIILLGILVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        SF++S+S  F SALSDDSS KDSI SG+HPSS SNTGSMVAIILLGILV VLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Subjt:  SFTSSVSGPF-SALSDDSSPKDSIKSGHHPSSSSNTGSMVAIILLGILVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

A0A5A7V4C4 Uncharacterized protein5.5e-2893.59Show/hide
Query:  LSDDSSPKDSIKSGHHPSSSSNTGSMVAIILLGILVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        LSDDSS KDSI SG+HPSS SNTGSMVAIILLGILV VLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Subjt:  LSDDSSPKDSIKSGHHPSSSSNTGSMVAIILLGILVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

A0A6J1EUP1 uncharacterized protein LOC1114360827.9e-2791.25Show/hide
Query:  SALSDDSSPKDSIKSGHHPSSSSNTGSMVAIILLGILVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        SALS+DSS KDSI SG H SSSS TGSMVAIILLG LVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Subjt:  SALSDDSSPKDSIKSGHHPSSSSNTGSMVAIILLGILVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

A0A6J1J6C2 uncharacterized protein LOC1114829877.9e-2791.25Show/hide
Query:  SALSDDSSPKDSIKSGHHPSSSSNTGSMVAIILLGILVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        SALS+DSS KDSI SG H SSSS TGSMVAIILLG LVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
Subjt:  SALSDDSSPKDSIKSGHHPSSSSNTGSMVAIILLGILVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G09645.1 unknown protein1.3e-1862.2Show/hide
Query:  FSALSDDSSPKDS-IKSGHHPSSSSNTGSMVAIILLGILVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        F  LS DS   ++ +K+  H +SSS TG+ V ++L+G + V + SFFL+KLWQKK+R+EQYARLLKLFEEDDELEVELGLRD
Subjt:  FSALSDDSSPKDS-IKSGHHPSSSSNTGSMVAIILLGILVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

AT1G57765.1 unknown protein1.1e-1761.73Show/hide
Query:  FSALSDDSSPKDSIKSGHHPSSSSNTGSMVAIILLGILVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        F  +S D +   +       +SSS TG+ V  ILLG   V  LSFFL+KLWQKK+R+EQYARLLKLFEEDDELEVELGLRD
Subjt:  FSALSDDSSPKDSIKSGHHPSSSSNTGSMVAIILLGILVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

AT1G57765.2 unknown protein1.5e-1760.49Show/hide
Query:  FSALSDDSSPKDSIKSGHHPSSSSNTGSMVAIILLGILVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        +  +S D +   +       +SSS TG+ V  ILLG   V  LSFFL+KLWQKK+R+EQYARLLKLFEEDDELEVELGLRD
Subjt:  FSALSDDSSPKDSIKSGHHPSSSSNTGSMVAIILLGILVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD

AT3G53490.1 unknown protein4.4e-0638.16Show/hide
Query:  DDSSPKDSIKSGHHPSSSSNTGSMVAIILLGILVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD
        +  + K+  K G HP        ++ ++LLG++ V LL    +K W+KK+R+++ AR LKLFE+ D++E ELGL +
Subjt:  DDSSPKDSIKSGHHPSSSSNTGSMVAIILLGILVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTCTCGTACACTCCTTCACCTCCTCCGTCTCCGGCCCGTTTTCTGCCCTTTCTGATGATTCCAGTCCCAAAGATAGTATTAAGTCTGGACATCATCCATCCTCCAG
CAGCAACACTGGCTCGATGGTTGCCATCATCCTCCTTGGGATTTTGGTAGTTGTGTTATTATCATTTTTCCTTTTCAAGTTATGGCAAAAGAAGAGAAGAGAGGAACAAT
ATGCCCGACTTCTGAAATTGTTTGAAGAAGATGATGAGCTCGAGGTTGAACTTGGTCTTCGGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTCTCGTACACTCCTTCACCTCCTCCGTCTCCGGCCCGTTTTCTGCCCTTTCTGATGATTCCAGTCCCAAAGATAGTATTAAGTCTGGACATCATCCATCCTCCAG
CAGCAACACTGGCTCGATGGTTGCCATCATCCTCCTTGGGATTTTGGTAGTTGTGTTATTATCATTTTTCCTTTTCAAGTTATGGCAAAAGAAGAGAAGAGAGGAACAAT
ATGCCCGACTTCTGAAATTGTTTGAAGAAGATGATGAGCTCGAGGTTGAACTTGGTCTTCGGGATTGA
Protein sequenceShow/hide protein sequence
MCLVHSFTSSVSGPFSALSDDSSPKDSIKSGHHPSSSSNTGSMVAIILLGILVVVLLSFFLFKLWQKKRREEQYARLLKLFEEDDELEVELGLRD