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Spg029743 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg029743
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTetratricopeptide-like helical
Genome locationscaffold6:10969776..10971678
RNA-Seq ExpressionSpg029743
SyntenySpg029743
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649147.1 hypothetical protein Csa_014525, partial [Cucumis sativus]2.7e-0979.17Show/hide
Query:  MSVSLEALAMAGIDSNDWAMDAEEWGSNI-AMEND--VPPHLLADEDE
        M VSLEALAMAGIDSN+WAMDAEEW +N   MEND  +PPHLLADEDE
Subjt:  MSVSLEALAMAGIDSNDWAMDAEEWGSNI-AMEND--VPPHLLADEDE

KAG6577295.1 hypothetical protein SDJN03_24869, partial [Cucurbita argyrosperma subsp. sororia]5.0e-1153.26Show/hide
Query:  MSVSLEALAMAGIDSNDWAMDAEEWGSNIAMENDVPPHLLADEDEVDFNEWALDAEEWETNQMDNNVPPHLVADEEEDKFPAAGFFRRWRRK
        MSVSLEALAMAGI SN+WAMDAEEW  N  +ENDVPPHLLADED+ D N          T+ + N              FP AGFF   RR+
Subjt:  MSVSLEALAMAGIDSNDWAMDAEEWGSNIAMENDVPPHLLADEDEVDFNEWALDAEEWETNQMDNNVPPHLVADEEEDKFPAAGFFRRWRRK

KAG7015382.1 hypothetical protein SDJN02_23017, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-0867.92Show/hide
Query:  MSVSLEALAMAGIDSNDWAMDAEEWGSNIAMENDVPPHLLADEDEVDFNEWAL
        MSVSLEALAMAGIDSN+WAMDA+EW  +  M NDVPPHLL +ED  + +E A+
Subjt:  MSVSLEALAMAGIDSNDWAMDAEEWGSNIAMENDVPPHLLADEDEVDFNEWAL

KAG7015383.1 hypothetical protein SDJN02_23018, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-1079.59Show/hide
Query:  MSVSLEALAMAGIDSNDWAMDAEEWGSNIAMENDVPPHLLADEDEVDFN
        MSVSLEALAMAGI SN+WAMDAEEW  N  +ENDVPPHLLADED+ D N
Subjt:  MSVSLEALAMAGIDSNDWAMDAEEWGSNIAMENDVPPHLLADEDEVDFN

XP_022943015.1 uncharacterized protein LOC111447880 [Cucurbita moschata]4.2e-1082.22Show/hide
Query:  MSVSLEALAMAGIDSNDWAMDAEEWGSNIAMENDVPPHLLADEDE
        MSVSLEALAMAGIDSN+WAMDAEEW  N  ME D+PPHLLADED+
Subjt:  MSVSLEALAMAGIDSNDWAMDAEEWGSNIAMENDVPPHLLADEDE

TrEMBL top hitse value%identityAlignment
A0A0A0KU90 Uncharacterized protein1.3e-0979.17Show/hide
Query:  MSVSLEALAMAGIDSNDWAMDAEEWGSNI-AMEND--VPPHLLADEDE
        M VSLEALAMAGIDSN+WAMDAEEW +N   MEND  +PPHLLADEDE
Subjt:  MSVSLEALAMAGIDSNDWAMDAEEWGSNI-AMEND--VPPHLLADEDE

A0A0A0KWE7 Uncharacterized protein3.3e-0850.55Show/hide
Query:  MSVSLEALAMAGIDSNDWAMDAEEWGSNIAMEND-VPPHLLADEDEVDFNEWALDAEEWETNQMDNNVPPHLVADEEEDKFPAAGFFRRWR
        MSVSLEALAMAGIDSN+WAMDAEEW  N   E D VPPHLLADE++ +      D +E  T    +N             FP  G F  WR
Subjt:  MSVSLEALAMAGIDSNDWAMDAEEWGSNIAMEND-VPPHLLADEDEVDFNEWALDAEEWETNQMDNNVPPHLVADEEEDKFPAAGFFRRWR

A0A5A7TS68 Tetratricopeptide-like helical4.7e-0767.31Show/hide
Query:  MSVSLEALAMAGIDSNDWAMDAEEWGSNIAMEND-VPPHLLADEDEVDFNEW
        MSVSLEALAMAGIDSN+W MDA+EW  N   E D VPPHLLADE++ +  E+
Subjt:  MSVSLEALAMAGIDSNDWAMDAEEWGSNIAMEND-VPPHLLADEDEVDFNEW

A0A5D3CZU0 Tetratricopeptide-like helical4.7e-0767.31Show/hide
Query:  MSVSLEALAMAGIDSNDWAMDAEEWGSNIAMEND-VPPHLLADEDEVDFNEW
        MSVSLEALAMAGIDSN+W MDA+EW  N   E D VPPHLLADE++ +  E+
Subjt:  MSVSLEALAMAGIDSNDWAMDAEEWGSNIAMEND-VPPHLLADEDEVDFNEW

A0A6J1FX98 uncharacterized protein LOC1114478802.0e-1082.22Show/hide
Query:  MSVSLEALAMAGIDSNDWAMDAEEWGSNIAMENDVPPHLLADEDE
        MSVSLEALAMAGIDSN+WAMDAEEW  N  ME D+PPHLLADED+
Subjt:  MSVSLEALAMAGIDSNDWAMDAEEWGSNIAMENDVPPHLLADEDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G22320.1 unknown protein1.3e-0445.16Show/hide
Query:  LEALAMAGIDSNDWAMDAEEWGSNIAMENDVPPHLLADEDEVDFNEWALDAEEWETNQMDNN
        +EALAMAG+D  +W +  EEW      E+ VP HLLAD    DF E     EE E +  DN+
Subjt:  LEALAMAGIDSNDWAMDAEEWGSNIAMENDVPPHLLADEDEVDFNEWALDAEEWETNQMDNN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGTTTCTTTGGAAGCTTTGGCAATGGCGGGGATTGATTCCAATGACTGGGCTATGGATGCTGAAGAATGGGGAAGCAATATTGCAATGGAGAATGACGTTCCGCC
GCATTTATTAGCCGATGAAGACGAAGTTGATTTTAATGAGTGGGCTCTGGACGCTGAAGAATGGGAAACAAACCAAATGGACAACAATGTGCCACCGCATTTAGTAGCCG
ATGAAGAAGAAGACAAGTTTCCGGCCGCCGGATTCTTCCGCAGATGGCGGCGGAAGATGGCGGAGCTGGTGGTGTTCGTTGCAATTCCGGTATTATGTGTCACTTCACTT
TAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGGTTTCTTTGGAAGCTTTGGCAATGGCGGGGATTGATTCCAATGACTGGGCTATGGATGCTGAAGAATGGGGAAGCAATATTGCAATGGAGAATGACGTTCCGCC
GCATTTATTAGCCGATGAAGACGAAGTTGATTTTAATGAGTGGGCTCTGGACGCTGAAGAATGGGAAACAAACCAAATGGACAACAATGTGCCACCGCATTTAGTAGCCG
ATGAAGAAGAAGACAAGTTTCCGGCCGCCGGATTCTTCCGCAGATGGCGGCGGAAGATGGCGGAGCTGGTGGTGTTCGTTGCAATTCCGGTATTATGTGTCACTTCACTT
TAG
Protein sequenceShow/hide protein sequence
MSVSLEALAMAGIDSNDWAMDAEEWGSNIAMENDVPPHLLADEDEVDFNEWALDAEEWETNQMDNNVPPHLVADEEEDKFPAAGFFRRWRRKMAELVVFVAIPVLCVTSL