; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg029764 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg029764
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold6:9095667..9097468
RNA-Seq ExpressionSpg029764
SyntenySpg029764
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAH93942.1 Os07g0501200 [Oryza sativa Japonica Group]3.5e-0628.65Show/hide
Query:  KNVNSLIDDNNNWTEEKVRAHFNREDANYILNTPLGDPSPKDEIIWSLDKKGIFKVKSAYHLALFCSSVSETSVSDPSKLKSEKQGVYKNKILNDPNKSK
        K V  L++DN  W  E+++ HFN+ D + IL          D + W  DK GIF V+SAYHLA+  ++V+ +S S    L    + V+        N + 
Subjt:  KNVNSLIDDNNNWTEEKVRAHFNREDANYILNTPLGDPSPKDEIIWSLDKKGIFKVKSAYHLALFCSSVSETSVSDPSKLKSEKQGVYKNKILNDPNKSK

Query:  PESIQIF--NQISRSMHDLEGKNRPYQSPVDL----GRCESFRKSGFLESP-PQNCW---------KLNSNASWNESG
        P+ ++IF     + S+  L+ K      P+ +    GR E          P   N W            + ASW+ SG
Subjt:  PESIQIF--NQISRSMHDLEGKNRPYQSPVDL----GRCESFRKSGFLESP-PQNCW---------KLNSNASWNESG

XP_015388020.1 uncharacterized protein LOC107177951 [Citrus sinensis]2.0e-0636.54Show/hide
Query:  VNSLIDDNNNWTEEKVRAHFNREDANYILNTPLGDPSPKDEIIWSLDKKGIFKVKSAYHLALFCSSVSETSVSDPSKLKSEKQGVYKNKILNDPNKSKPE
        V+ LID+++ W ++ +R HF++EDA  IL  PL      D+++W  DKKG + VKS Y LAL     +      PS  K  K        L  P K+K E
Subjt:  VNSLIDDNNNWTEEKVRAHFNREDANYILNTPLGDPSPKDEIIWSLDKKGIFKVKSAYHLALFCSSVSETSVSDPSKLKSEKQGVYKNKILNDPNKSKPE

Query:  SIQI
          Q+
Subjt:  SIQI

XP_024162452.1 uncharacterized protein LOC112169623 [Rosa chinensis]2.6e-0647.54Show/hide
Query:  VNSLIDDNNNWTEEKVRAHFNREDANYILNTPLGDPSPKDEIIWSLDKKGIFKVKSAYHLA
        V+ LI   +NW E KVR+ F  ED   IL  PL    P+D + W  ++KG+F VKSAYH A
Subjt:  VNSLIDDNNNWTEEKVRAHFNREDANYILNTPLGDPSPKDEIIWSLDKKGIFKVKSAYHLA

XP_030502714.1 uncharacterized protein LOC115717884 [Cannabis sativa]5.9e-0641.89Show/hide
Query:  SKNVNSLIDDNNNWTEEKVRAHFNREDANYILNTPLGDPSPKDEIIWSLDKKGIFKVKSAYHLALFCSSVSETS
        S  ++  I D+  W   K+R HF   D   IL  P+   S KD+IIWS +  G+F VKSAYHLAL    +  +S
Subjt:  SKNVNSLIDDNNNWTEEKVRAHFNREDANYILNTPLGDPSPKDEIIWSLDKKGIFKVKSAYHLALFCSSVSETS

XP_040363828.1 uncharacterized protein LOC112169513 [Rosa chinensis]1.2e-0636.15Show/hide
Query:  KNVNSLIDDNNNWTEEKVRAHFNREDANYILNTPLGDPSPKDEIIWSLDKKGIFKVKSAYHLALFCSSVSETSVSDPSKLKSEKQGVYKNKILND--PNK
        + VN LI   NNW E KVR+ F  ++A  IL+ PL +  P+D + W L+KK +F VKSAYH A       + S   PS + +++  V+K KI N   P+ 
Subjt:  KNVNSLIDDNNNWTEEKVRAHFNREDANYILNTPLGDPSPKDEIIWSLDKKGIFKVKSAYHLALFCSSVSETSVSDPSKLKSEKQGVYKNKILND--PNK

Query:  SKPESIQIFNQISRSMHDLEGKNRPYQSPV
        +K  + +I + I  +M  L+ ++   +S V
Subjt:  SKPESIQIFNQISRSMHDLEGKNRPYQSPV

TrEMBL top hitse value%identityAlignment
A0A1S8AC01 Ribonuclease H-like superfamily protein7.5e-0746.77Show/hide
Query:  VNSLIDDNNNWTEEKVRAHFNREDANYILNTPLGDPSPKDEIIWSLDKKGIFKVKSAYHLAL
        V+ LIDD+N W E K+  HF++ DA+ I++ PL      D+I+W  DKKG + VKS Y +AL
Subjt:  VNSLIDDNNNWTEEKVRAHFNREDANYILNTPLGDPSPKDEIIWSLDKKGIFKVKSAYHLAL

A0A5D3CRR9 Putative non-LTR retroelement reverse transcriptase3.7e-0634.58Show/hide
Query:  MTSKNVNSLIDDNNNWTEEKVRAHFNREDANYILNTPLGDPSPKDEIIWSLDKKGIFKVKSAYHLALFCSSVSETSVSDPSKLKSEKQGVYKNKILNDPN
        +  + V+SLI+    W E+ ++A F + DAN ILN P       D+I W  D KG F +KSAYH A+              + K E +G +K+   +D  
Subjt:  MTSKNVNSLIDDNNNWTEEKVRAHFNREDANYILNTPLGDPSPKDEIIWSLDKKGIFKVKSAYHLALFCSSVSETSVSDPSKLKSEKQGVYKNKILNDPN

Query:  KSKPESI
        K K ES+
Subjt:  KSKPESI

A0A803QI38 Uncharacterized protein2.9e-0640.26Show/hide
Query:  VNSLIDDNNNWTEEKVRAHFNREDANYILNTPLGDPSPKDEIIWSLDKKGIFKVKSAYHLALFCSSVSETSVSDPSK
        V+  ID++  W  EK++ +F+    + IL  P+G P   D +IW+ D  GIF VKSAYH+A   S    +S S  SK
Subjt:  VNSLIDDNNNWTEEKVRAHFNREDANYILNTPLGDPSPKDEIIWSLDKKGIFKVKSAYHLALFCSSVSETSVSDPSK

A0A803QSV1 Uncharacterized protein1.3e-0641.89Show/hide
Query:  SKNVNSLIDDNNNWTEEKVRAHFNREDANYILNTPLGDPSPKDEIIWSLDKKGIFKVKSAYHLALFCSSVSETS
        S  ++  I D+  W   K+R HF+  +   IL+ P+   S KD++IWS D  G+F VKSAYHLAL    +  TS
Subjt:  SKNVNSLIDDNNNWTEEKVRAHFNREDANYILNTPLGDPSPKDEIIWSLDKKGIFKVKSAYHLALFCSSVSETS

C7J4L5 Os07g0501200 protein1.7e-0628.65Show/hide
Query:  KNVNSLIDDNNNWTEEKVRAHFNREDANYILNTPLGDPSPKDEIIWSLDKKGIFKVKSAYHLALFCSSVSETSVSDPSKLKSEKQGVYKNKILNDPNKSK
        K V  L++DN  W  E+++ HFN+ D + IL          D + W  DK GIF V+SAYHLA+  ++V+ +S S    L    + V+        N + 
Subjt:  KNVNSLIDDNNNWTEEKVRAHFNREDANYILNTPLGDPSPKDEIIWSLDKKGIFKVKSAYHLALFCSSVSETSVSDPSKLKSEKQGVYKNKILNDPNKSK

Query:  PESIQIF--NQISRSMHDLEGKNRPYQSPVDL----GRCESFRKSGFLESP-PQNCW---------KLNSNASWNESG
        P+ ++IF     + S+  L+ K      P+ +    GR E          P   N W            + ASW+ SG
Subjt:  PESIQIF--NQISRSMHDLEGKNRPYQSPVDL----GRCESFRKSGFLESP-PQNCW---------KLNSNASWNESG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAGCAAGAATGTCAATAGCCTTATTGATGATAACAACAATTGGACAGAAGAAAAAGTGAGAGCCCATTTCAATCGGGAAGATGCTAATTACATCCTAAACACTCC
CCTTGGGGATCCTAGTCCTAAGGATGAAATCATTTGGAGCCTTGACAAGAAAGGGATCTTTAAAGTTAAGAGTGCCTACCATTTGGCCCTCTTTTGCTCATCAGTTAGTG
AGACTTCTGTTTCCGACCCTAGTAAACTGAAATCGGAAAAACAAGGAGTCTACAAGAACAAAATTCTCAATGACCCAAATAAATCAAAACCAGAGTCGATACAGATTTTC
AATCAAATCAGCAGGAGCATGCATGATCTTGAAGGAAAGAATAGGCCTTACCAGTCCCCTGTTGATTTGGGGAGATGCGAGAGCTTCCGGAAGTCAGGTTTCTTGGAATC
CCCGCCCCAAAACTGCTGGAAGCTAAATTCAAATGCCTCTTGGAATGAATCAGGCAGAGGTGATGTGGGAAGGTCTGAAATCATTGCTTACCTTGTCTGTAGACCGCCTC
TGATTGAAGCAGAGTCTGACTGCTTAGAGCTCATCGCCGCCTTTAATGAAGATGAAGATGATCAATCGGAGATGAAGAGTTGCACTGAAGCTATTCGTCTCCTGTTCCCT
GATCAGGGAGTGCTCGTCTTCAAGCACTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGAGCAAGAATGTCAATAGCCTTATTGATGATAACAACAATTGGACAGAAGAAAAAGTGAGAGCCCATTTCAATCGGGAAGATGCTAATTACATCCTAAACACTCC
CCTTGGGGATCCTAGTCCTAAGGATGAAATCATTTGGAGCCTTGACAAGAAAGGGATCTTTAAAGTTAAGAGTGCCTACCATTTGGCCCTCTTTTGCTCATCAGTTAGTG
AGACTTCTGTTTCCGACCCTAGTAAACTGAAATCGGAAAAACAAGGAGTCTACAAGAACAAAATTCTCAATGACCCAAATAAATCAAAACCAGAGTCGATACAGATTTTC
AATCAAATCAGCAGGAGCATGCATGATCTTGAAGGAAAGAATAGGCCTTACCAGTCCCCTGTTGATTTGGGGAGATGCGAGAGCTTCCGGAAGTCAGGTTTCTTGGAATC
CCCGCCCCAAAACTGCTGGAAGCTAAATTCAAATGCCTCTTGGAATGAATCAGGCAGAGGTGATGTGGGAAGGTCTGAAATCATTGCTTACCTTGTCTGTAGACCGCCTC
TGATTGAAGCAGAGTCTGACTGCTTAGAGCTCATCGCCGCCTTTAATGAAGATGAAGATGATCAATCGGAGATGAAGAGTTGCACTGAAGCTATTCGTCTCCTGTTCCCT
GATCAGGGAGTGCTCGTCTTCAAGCACTGA
Protein sequenceShow/hide protein sequence
MTSKNVNSLIDDNNNWTEEKVRAHFNREDANYILNTPLGDPSPKDEIIWSLDKKGIFKVKSAYHLALFCSSVSETSVSDPSKLKSEKQGVYKNKILNDPNKSKPESIQIF
NQISRSMHDLEGKNRPYQSPVDLGRCESFRKSGFLESPPQNCWKLNSNASWNESGRGDVGRSEIIAYLVCRPPLIEAESDCLELIAAFNEDEDDQSEMKSCTEAIRLLFP
DQGVLVFKH