; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg029768 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg029768
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionWD_REPEATS_REGION domain-containing protein
Genome locationscaffold6:8126325..8131727
RNA-Seq ExpressionSpg029768
SyntenySpg029768
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0034198 - cellular response to amino acid starvation (biological process)
GO:1904263 - positive regulation of TORC1 signaling (biological process)
GO:0031080 - nuclear pore outer ring (cellular component)
GO:0035859 - Seh1-associated complex (cellular component)
GO:0005198 - structural molecule activity (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR036322 - WD40-repeat-containing domain superfamily
IPR037363 - Sec13/Seh1 family
IPR037597 - Nucleoporin Seh1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600526.1 Protein SEH1, partial [Cucurbita argyrosperma subsp. sororia]4.4e-17290.52Show/hide
Query:  MEKAMATFDNGTVCSAWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAAIFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQWK
        MEKAMATFD GTVCSAWNYSA+R  TG ADGT+VIFDS DPSSSSTSLTRTS+FKAHEAAIFKIVWVPPEYGDS+ACICSDGS+SLWEE+VEDAQPLQWK
Subjt:  MEKAMATFDNGTVCSAWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAAIFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQWK

Query:  LCKRFKSNSSQILDIQSGNSSSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLAFNSDTPQL
        L K FKSNSSQI+DIQ GNSSSGLKMI AFSDG+VKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKA+CLSASISWNP+RGERQQSSFVLAF SDTPQL
Subjt:  LCKRFKSNSSQILDIQSGNSSSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLAFNSDTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNIGRPHEVIAVATQKGIAIWRLGLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLAST
        +SAKVWEFDQAHQRWLPVAELAL +DKGD VYAVAWAQNIGRP+EVIAVATQKG+AIWRLGLNP +DGRLSTERVALLSGH+GEVW+MEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNIGRPHEVIAVATQKGIAIWRLGLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLAST

Query:  GKDMMVRLWQSNLNGVWHQHAAFEPTS
        GKD MVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDMMVRLWQSNLNGVWHQHAAFEPTS

KAG7031165.1 Protein SEH1 [Cucurbita argyrosperma subsp. argyrosperma]9.8e-17290.52Show/hide
Query:  MEKAMATFDNGTVCSAWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAAIFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQWK
        MEKAMATFD GTVCSAWNYSA+R  TG ADGT+VIFDS DPSSSSTSLTRTS+FKAHE AIFKIVWVPPEYGDS+ACICSDGS+SLWEE+VEDAQPLQWK
Subjt:  MEKAMATFDNGTVCSAWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAAIFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQWK

Query:  LCKRFKSNSSQILDIQSGNSSSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLAFNSDTPQL
        L K FKSNSSQI+DIQ GNSSSGLKMI AFSDG+VKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKA+CLSASISWNP+RGERQQSSFVLAF SDTPQL
Subjt:  LCKRFKSNSSQILDIQSGNSSSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLAFNSDTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNIGRPHEVIAVATQKGIAIWRLGLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLAST
        +SAKVWEFDQAHQRWLPVAELAL +DKGD VYAVAWAQNIGRP+EVIAVATQKGIAIWRLGLNP +DGRLSTERVALLSGH+GEVW+MEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNIGRPHEVIAVATQKGIAIWRLGLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLAST

Query:  GKDMMVRLWQSNLNGVWHQHAAFEPTS
        GKD MVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDMMVRLWQSNLNGVWHQHAAFEPTS

XP_022942103.1 protein SEH1 [Cucurbita moschata]7.5e-17290.52Show/hide
Query:  MEKAMATFDNGTVCSAWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAAIFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQWK
        MEKAMATFD GTVCSAWNYSA+R  TG ADGT+VIFDS DPSSSSTSLTRTS+FKAHEAAIFKIVWVPPEYGDS+ACICSDGS+SLWEE+VEDAQPLQWK
Subjt:  MEKAMATFDNGTVCSAWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAAIFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQWK

Query:  LCKRFKSNSSQILDIQSGNSSSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLAFNSDTPQL
        L K FKSNSSQI+DIQ GNSSSGLKMI AFSDG++KVYELMDPLDLKSWQLQAEFQNVIDSISTVRKA+CLSASISWNP+RGERQQSSFVLAF SDTPQL
Subjt:  LCKRFKSNSSQILDIQSGNSSSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLAFNSDTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNIGRPHEVIAVATQKGIAIWRLGLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLAST
        +SAKVWEFDQAHQRWLPVAELAL +DKGD VYAVAWAQNIGRP+EVIAVATQKGIAIWRLGLNP +DGRLSTERVALLSGH+GEVW+MEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNIGRPHEVIAVATQKGIAIWRLGLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLAST

Query:  GKDMMVRLWQSNLNGVWHQHAAFEPTS
        GKD MVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDMMVRLWQSNLNGVWHQHAAFEPTS

XP_022981824.1 protein SEH1 [Cucurbita maxima]3.7e-17190.21Show/hide
Query:  MEKAMATFDNGTVCSAWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAAIFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQWK
        MEKAMATFD GTVCSAWNYSA+R  TG ADGT+V+FDS DPSSSSTSLTRTS+FKAHEAAIFKIVWVPPEYGDS+ACICSDGS+SLWEE+VEDAQPLQWK
Subjt:  MEKAMATFDNGTVCSAWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAAIFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQWK

Query:  LCKRFKSNSSQILDIQSGNSSSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLAFNSDTPQL
        L K FKSNSSQILDIQ GNSSSGLKMI AFSDG+VKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKA+CLSASISWNP+RGERQQSSFVLAF SDTPQL
Subjt:  LCKRFKSNSSQILDIQSGNSSSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLAFNSDTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNIGRPHEVIAVATQKGIAIWRLGLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLAST
        +SAKVWEFD+AHQRWLPVAELAL +DKGD VYAVAWAQNIGRP+EVIAVATQKGIAIWRLGLNP +DGRLSTERVALLSGH+ EVW+MEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNIGRPHEVIAVATQKGIAIWRLGLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLAST

Query:  GKDMMVRLWQSNLNGVWHQHAAFEPTS
        GKD MVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDMMVRLWQSNLNGVWHQHAAFEPTS

XP_023547085.1 protein SEH1 [Cucurbita pepo subsp. pepo]4.4e-17290.83Show/hide
Query:  MEKAMATFDNGTVCSAWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAAIFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQWK
        MEKAMATFD GTVCSAWNYSA+R  TG ADGT+VIFDS DPSSSSTSLTRTS+FK HEAAIFKIVWVPPEYGDS+ACICSDGS+SLWEE+VEDAQPLQWK
Subjt:  MEKAMATFDNGTVCSAWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAAIFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQWK

Query:  LCKRFKSNSSQILDIQSGNSSSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLAFNSDTPQL
        L K FKSNSSQILDIQ GNSSSGLKMI AFSDG+VKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKA+CLSASISWNP+RGERQQSSFVLAF+SDTPQL
Subjt:  LCKRFKSNSSQILDIQSGNSSSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLAFNSDTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNIGRPHEVIAVATQKGIAIWRLGLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLAST
        +SAKVWEFDQAHQRWLPVAELAL +DKGD VYAVAWAQNIGRP+EVIAVATQKGIAIWRLGLNP +DGRLSTERVALLSGH+GEVW+MEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNIGRPHEVIAVATQKGIAIWRLGLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLAST

Query:  GKDMMVRLWQSNLNGVWHQHAAFEPTS
        GKD MVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDMMVRLWQSNLNGVWHQHAAFEPTS

TrEMBL top hitse value%identityAlignment
A0A0A0KWZ8 WD_REPEATS_REGION domain-containing protein6.2e-16486.24Show/hide
Query:  MEKAMATFDNGTVCSAWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAAIFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQWK
        MEKAMATF  GT+CSAWNYS+ R AT  +DGTLVIFDSP PSSSSTS T TS+FKAHE AI KIVWVPPEYGDSVACICSDG++SLWEE+VEDAQPLQWK
Subjt:  MEKAMATFDNGTVCSAWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAAIFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQWK

Query:  LCKRFKSNSSQILDIQSGNSSSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLAFNSDTPQL
        LCK FKSNSSQILD+Q GNSSSGLKMI AFSDG++KVYELMDPL+LK+WQLQAEFQNVIDSISTVRK+SC SASISWNPHRGE QQSSFV+AF+S+TPQL
Subjt:  LCKRFKSNSSQILDIQSGNSSSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLAFNSDTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNIGRPHEVIAVATQKGIAIWRLGLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLAST
        NSAKVWEFDQAH RWLPVAELAL ++KGDEVYAVAWAQNIGRP+EVIAVATQ+GIAIW LGL+P  DGRLS ERVALLSGH+GEVWEMEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNIGRPHEVIAVATQKGIAIWRLGLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLAST

Query:  GKDMMVRLWQSNLNGVWHQHAAFEPTS
        GKD MVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDMMVRLWQSNLNGVWHQHAAFEPTS

A0A1S3BTS7 protein SEH12.2e-16988.99Show/hide
Query:  MEKAMATFDNGTVCSAWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAAIFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQWK
        MEKAMATFD GT+CSAWN+S++R AT  +DGTLVIFDSP PSSSSTSLTRTS+FKAHEAAI KIVWVPPEYGDSVACICSDG++SLWEE+VEDAQPL+WK
Subjt:  MEKAMATFDNGTVCSAWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAAIFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQWK

Query:  LCKRFKSNSSQILDIQSGNSSSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLAFNSDTPQL
        LCK FKSNSSQILD+Q GNSSSGLKMI AFSDG++KVYELMDPLDLKSWQLQAEFQNVIDSISTVRK+SC SASISWNPHRGE QQSSFVLAF+S+TPQL
Subjt:  LCKRFKSNSSQILDIQSGNSSSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLAFNSDTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNIGRPHEVIAVATQKGIAIWRLGLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLAST
        NSAKVWEFDQAHQRWLPVAELAL ++KGDEVYAVAWAQNIGRP+EVIAVATQ+GIAIWRLGL+P TDGRLSTERVALLSGH+GEVWEMEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNIGRPHEVIAVATQKGIAIWRLGLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLAST

Query:  GKDMMVRLWQSNLNGVWHQHAAFEPTS
        GKD MVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDMMVRLWQSNLNGVWHQHAAFEPTS

A0A6J1C5X6 protein SEH12.0e-17089.91Show/hide
Query:  MEKAMATFDNGTVCSAWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAAIFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQWK
        ME AMA+FD GT+CSAWNYSA+R AT   DGTLVIFDSPDPSSSSTSLTRTS+FKAHEAAI KIVWVPPEYGDSVACICSDG++SLWEE+VEDAQPLQWK
Subjt:  MEKAMATFDNGTVCSAWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAAIFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQWK

Query:  LCKRFKSNSSQILDIQSGNSSSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLAFNSDTPQL
        LCKRFKSNS+Q+LDIQ GNSSSGLKMI AFS  HVKVYELMDPLDLK+WQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLA NS+TPQL
Subjt:  LCKRFKSNSSQILDIQSGNSSSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLAFNSDTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNIGRPHEVIAVATQKGIAIWRLGLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLAST
        NSAKVWEFDQAHQRWLPVAELAL +DKGDEVYAVAWAQNIGRP+EVIAVATQKGIAIW LG NP  DGRLSTERVALLSGH+GEVWEMEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNIGRPHEVIAVATQKGIAIWRLGLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLAST

Query:  GKDMMVRLWQSNLNGVWHQHAAFEPTS
        GKD MVRLWQSNLNGVWHQ AAFEPTS
Subjt:  GKDMMVRLWQSNLNGVWHQHAAFEPTS

A0A6J1FTY0 protein SEH13.6e-17290.52Show/hide
Query:  MEKAMATFDNGTVCSAWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAAIFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQWK
        MEKAMATFD GTVCSAWNYSA+R  TG ADGT+VIFDS DPSSSSTSLTRTS+FKAHEAAIFKIVWVPPEYGDS+ACICSDGS+SLWEE+VEDAQPLQWK
Subjt:  MEKAMATFDNGTVCSAWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAAIFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQWK

Query:  LCKRFKSNSSQILDIQSGNSSSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLAFNSDTPQL
        L K FKSNSSQI+DIQ GNSSSGLKMI AFSDG++KVYELMDPLDLKSWQLQAEFQNVIDSISTVRKA+CLSASISWNP+RGERQQSSFVLAF SDTPQL
Subjt:  LCKRFKSNSSQILDIQSGNSSSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLAFNSDTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNIGRPHEVIAVATQKGIAIWRLGLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLAST
        +SAKVWEFDQAHQRWLPVAELAL +DKGD VYAVAWAQNIGRP+EVIAVATQKGIAIWRLGLNP +DGRLSTERVALLSGH+GEVW+MEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNIGRPHEVIAVATQKGIAIWRLGLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLAST

Query:  GKDMMVRLWQSNLNGVWHQHAAFEPTS
        GKD MVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDMMVRLWQSNLNGVWHQHAAFEPTS

A0A6J1J2X1 protein SEH11.8e-17190.21Show/hide
Query:  MEKAMATFDNGTVCSAWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAAIFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQWK
        MEKAMATFD GTVCSAWNYSA+R  TG ADGT+V+FDS DPSSSSTSLTRTS+FKAHEAAIFKIVWVPPEYGDS+ACICSDGS+SLWEE+VEDAQPLQWK
Subjt:  MEKAMATFDNGTVCSAWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAAIFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQWK

Query:  LCKRFKSNSSQILDIQSGNSSSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLAFNSDTPQL
        L K FKSNSSQILDIQ GNSSSGLKMI AFSDG+VKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKA+CLSASISWNP+RGERQQSSFVLAF SDTPQL
Subjt:  LCKRFKSNSSQILDIQSGNSSSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLAFNSDTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNIGRPHEVIAVATQKGIAIWRLGLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLAST
        +SAKVWEFD+AHQRWLPVAELAL +DKGD VYAVAWAQNIGRP+EVIAVATQKGIAIWRLGLNP +DGRLSTERVALLSGH+ EVW+MEWDMGGMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNIGRPHEVIAVATQKGIAIWRLGLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLAST

Query:  GKDMMVRLWQSNLNGVWHQHAAFEPTS
        GKD MVRLWQSNLNGVWHQHAAFEPTS
Subjt:  GKDMMVRLWQSNLNGVWHQHAAFEPTS

SwissProt top hitse value%identityAlignment
C1BK83 Nucleoporin SEH11.3e-3028.03Show/hide
Query:  AWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAAIFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQ-----WKLCKRFKSNSS
        ++++   R AT  +D ++ ++D  D    +     T+S+K H  +++++ W  PE+G  +A    D +A++WEEIV ++   Q     W        + +
Subjt:  AWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAAIFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQ-----WKLCKRFKSNSS

Query:  QILDIQSGNSSSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLAFNSDTPQLNSAKV--WEF
         + D++      GL +    +DG V++YE  D ++L  W LQ E       IS     SC    ISWNP    R  S  +   + D+    S KV  +E+
Subjt:  QILDIQSGNSSSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLAFNSDTPQLNSAKV--WEF

Query:  DQAHQRWLPVAELALASDKGDEVYAVAWAQNIGRPHEVIAVATQKGIAIWRL-----GLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLASTGKD
         +  +++  V  L   +   D V+ +A+A N+GR   V+A+AT K + I++L       +     +L  +  A   GH+ +VW + W++    LAS+G D
Subjt:  DQAHQRWLPVAELALASDKGDEVYAVAWAQNIGRPHEVIAVATQKGIAIWRL-----GLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLASTGKD

Query:  MMVRLWQSNLNGVW
          VRLW++N    W
Subjt:  MMVRLWQSNLNGVW

Q4FZW5 Nucleoporin SEH1-A5.1e-3026.11Show/hide
Query:  AWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAAIFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQ-----PLQWKLCKRFKSNSS
        ++++   R AT  +D ++ ++D     S + +   T+S+K H  +++++ W  PE+G  +A    D +A++WEEIV ++         W        + +
Subjt:  AWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAAIFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQ-----PLQWKLCKRFKSNSS

Query:  QILDIQSGNSSSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLAFNSDTPQ-LNSAKVWEFD
         + D++      GL +    +DG V++YE  D ++L  W LQ E       IS     SC    ISWNP           +  +  +P  +   +++E++
Subjt:  QILDIQSGNSSSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLAFNSDTPQ-LNSAKVWEFD

Query:  QAHQRWLPVAELALASDKGDEVYAVAWAQNIGRPHEVIAVATQKGIAIWRLG------LNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLASTGKD
        +  +++     L   S   D V+ +A+A N+GR   ++AVAT K + I+ +        + G   +     VA    H+ +VW + W++ G  LAS+G D
Subjt:  QAHQRWLPVAELALASDKGDEVYAVAWAQNIGRPHEVIAVATQKGIAIWRLG------LNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLASTGKD

Query:  MMVRLWQSNLNGVW
          VRLW++N    W
Subjt:  MMVRLWQSNLNGVW

Q6GNF1 Nucleoporin SEH1-B2.3e-3026.11Show/hide
Query:  AWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAAIFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQ-----PLQWKLCKRFKSNSS
        ++++   R AT  +D ++ ++D     S + +   T+S+K H  +++++ W  PE+G  +A    D +A++WEEIV ++         W        + +
Subjt:  AWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAAIFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQ-----PLQWKLCKRFKSNSS

Query:  QILDIQSGNSSSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLAFNSDTPQ-LNSAKVWEFD
         + D++      GL +    +DG V++YE  D ++L  W LQ E       IS     SC    ISWNP           +  +  +P  +   +++E++
Subjt:  QILDIQSGNSSSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLAFNSDTPQ-LNSAKVWEFD

Query:  QAHQRWLPVAELALASDKGDEVYAVAWAQNIGRPHEVIAVATQKGIAIWRLG------LNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLASTGKD
        +  +++     L   S   D V+ +A+A N+GR   ++AVAT K + I+ +        + G   +     VA    H+ +VW + W++ G  LAS+G D
Subjt:  QAHQRWLPVAELALASDKGDEVYAVAWAQNIGRPHEVIAVATQKGIAIWRLG------LNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLASTGKD

Query:  MMVRLWQSNLNGVW
          VRLW++N    W
Subjt:  MMVRLWQSNLNGVW

Q93VR9 Protein SEH19.3e-12563.08Show/hide
Query:  MEKAMATFDNGTVCSAWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAAIFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQWK
        M K+MAT D+GT CS+WN S +R A G  +G L I++S   +SSS++ + TS  +  E++I KIVW+P EYGD+VAC+C DGS S+WEE+ EDA  L+WK
Subjt:  MEKAMATFDNGTVCSAWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAAIFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQWK

Query:  LCKRFKSNSSQILDIQSGNSSSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLAFNSDTPQL
        LCK  K+ SSQ+LD+Q G S   LKM+ A+SDG+++V+EL++PL+LK+WQLQAEFQNVIDS+ST+ K S LSAS+SWNP +GE Q+ SFVLAFNSD+P L
Subjt:  LCKRFKSNSSQILDIQSGNSSSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLAFNSDTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNIGRPHEVIAVATQKGIAIWRLGLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLAST
        NS+K+WEFD+AH RWL VAELAL  DKGD VYA++WA NIGRP+EV+AVAT KGI IW +GL P  +GRL  ++V+ LSGH GEVW+MEWDM GMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNIGRPHEVIAVATQKGIAIWRLGLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLAST

Query:  GKDMMVRLWQSNLNGVWHQHAAFEP
        G D MV+LWQSNLNG WH+ A  EP
Subjt:  GKDMMVRLWQSNLNGVWHQHAAFEP

Q96EE3 Nucleoporin SEH16.7e-3026.11Show/hide
Query:  AWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAAIFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQ-----PLQWKLCKRFKSNSS
        ++++   R AT  +D ++ ++D     S S     T+S+K H  +++++ W  PE+G  +A    D +A++WEEIV ++         W        + +
Subjt:  AWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAAIFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQ-----PLQWKLCKRFKSNSS

Query:  QILDIQSGNSSSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLAFNSDTPQ-LNSAKVWEFD
         + D++      GL +    +DG V++YE  D ++L  W LQ E       IS     SC    ISWNP           +  +  +P  +   +++E++
Subjt:  QILDIQSGNSSSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLAFNSDTPQ-LNSAKVWEFD

Query:  QAHQRWLPVAELALASDKGDEVYAVAWAQNIGRPHEVIAVATQKGIAIWRLG------LNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLASTGKD
        +  +++     L   +   D V+ +A+A N+GR   ++A+AT K + I+ L        + G   +     VA    H+ +VW + W++ G  LAS+G D
Subjt:  QAHQRWLPVAELALASDKGDEVYAVAWAQNIGRPHEVIAVATQKGIAIWRLG------LNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLASTGKD

Query:  MMVRLWQSNLNGVW
          VRLW++N    W
Subjt:  MMVRLWQSNLNGVW

Arabidopsis top hitse value%identityAlignment
AT1G64350.1 Transducin/WD40 repeat-like superfamily protein6.6e-12663.08Show/hide
Query:  MEKAMATFDNGTVCSAWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAAIFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQWK
        M K+MAT D+GT CS+WN S +R A G  +G L I++S   +SSS++ + TS  +  E++I KIVW+P EYGD+VAC+C DGS S+WEE+ EDA  L+WK
Subjt:  MEKAMATFDNGTVCSAWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAAIFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQWK

Query:  LCKRFKSNSSQILDIQSGNSSSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLAFNSDTPQL
        LCK  K+ SSQ+LD+Q G S   LKM+ A+SDG+++V+EL++PL+LK+WQLQAEFQNVIDS+ST+ K S LSAS+SWNP +GE Q+ SFVLAFNSD+P L
Subjt:  LCKRFKSNSSQILDIQSGNSSSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLAFNSDTPQL

Query:  NSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNIGRPHEVIAVATQKGIAIWRLGLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLAST
        NS+K+WEFD+AH RWL VAELAL  DKGD VYA++WA NIGRP+EV+AVAT KGI IW +GL P  +GRL  ++V+ LSGH GEVW+MEWDM GMTLAST
Subjt:  NSAKVWEFDQAHQRWLPVAELALASDKGDEVYAVAWAQNIGRPHEVIAVATQKGIAIWRLGLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLAST

Query:  GKDMMVRLWQSNLNGVWHQHAAFEP
        G D MV+LWQSNLNG WH+ A  EP
Subjt:  GKDMMVRLWQSNLNGVWHQHAAFEP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGGCTATGGCGACCTTCGACAATGGCACGGTTTGTTCAGCTTGGAACTACTCCGCCAACAGATTTGCCACCGGTTTGGCCGACGGAACCCTCGTCATCTTCGA
CTCTCCCGACCCTTCTTCTTCATCGACGTCCTTAACTCGCACTTCAAGCTTCAAGGCACATGAGGCTGCAATTTTTAAGATTGTTTGGGTCCCTCCAGAGTATGGTGATT
CTGTTGCATGCATTTGTTCAGATGGATCTGCATCATTGTGGGAGGAGATTGTTGAAGATGCCCAGCCTCTGCAGTGGAAGCTATGCAAACGCTTCAAAAGTAATTCATCC
CAAATCCTTGACATCCAATCTGGAAATTCCTCCTCTGGTCTGAAAATGATTGTAGCATTTTCAGATGGTCATGTAAAAGTTTATGAGCTTATGGATCCTTTGGATTTGAA
GAGTTGGCAACTTCAGGCTGAATTTCAGAATGTCATTGATTCCATTTCTACAGTCAGGAAAGCATCTTGCTTATCTGCAAGTATATCTTGGAATCCACATCGAGGTGAAA
GACAACAATCAAGCTTTGTTTTGGCTTTTAATTCGGATACACCACAGCTTAATTCTGCCAAGGTTTGGGAATTTGATCAGGCTCATCAAAGATGGCTTCCTGTTGCAGAG
TTGGCTTTGGCTTCAGACAAAGGAGATGAGGTTTATGCTGTTGCGTGGGCACAAAATATTGGAAGGCCACATGAGGTAATAGCTGTTGCAACCCAGAAAGGAATTGCAAT
ATGGCGTCTTGGATTAAACCCGGGCACAGATGGAAGGCTCTCAACAGAAAGAGTTGCTCTGCTTTCTGGGCATCATGGCGAGGTTTGGGAGATGGAGTGGGACATGGGTG
GTATGACATTGGCATCAACAGGAAAAGATATGATGGTCCGGTTATGGCAATCCAACCTCAATGGTGTTTGGCACCAACATGCTGCATTTGAGCCCACTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGGCTATGGCGACCTTCGACAATGGCACGGTTTGTTCAGCTTGGAACTACTCCGCCAACAGATTTGCCACCGGTTTGGCCGACGGAACCCTCGTCATCTTCGA
CTCTCCCGACCCTTCTTCTTCATCGACGTCCTTAACTCGCACTTCAAGCTTCAAGGCACATGAGGCTGCAATTTTTAAGATTGTTTGGGTCCCTCCAGAGTATGGTGATT
CTGTTGCATGCATTTGTTCAGATGGATCTGCATCATTGTGGGAGGAGATTGTTGAAGATGCCCAGCCTCTGCAGTGGAAGCTATGCAAACGCTTCAAAAGTAATTCATCC
CAAATCCTTGACATCCAATCTGGAAATTCCTCCTCTGGTCTGAAAATGATTGTAGCATTTTCAGATGGTCATGTAAAAGTTTATGAGCTTATGGATCCTTTGGATTTGAA
GAGTTGGCAACTTCAGGCTGAATTTCAGAATGTCATTGATTCCATTTCTACAGTCAGGAAAGCATCTTGCTTATCTGCAAGTATATCTTGGAATCCACATCGAGGTGAAA
GACAACAATCAAGCTTTGTTTTGGCTTTTAATTCGGATACACCACAGCTTAATTCTGCCAAGGTTTGGGAATTTGATCAGGCTCATCAAAGATGGCTTCCTGTTGCAGAG
TTGGCTTTGGCTTCAGACAAAGGAGATGAGGTTTATGCTGTTGCGTGGGCACAAAATATTGGAAGGCCACATGAGGTAATAGCTGTTGCAACCCAGAAAGGAATTGCAAT
ATGGCGTCTTGGATTAAACCCGGGCACAGATGGAAGGCTCTCAACAGAAAGAGTTGCTCTGCTTTCTGGGCATCATGGCGAGGTTTGGGAGATGGAGTGGGACATGGGTG
GTATGACATTGGCATCAACAGGAAAAGATATGATGGTCCGGTTATGGCAATCCAACCTCAATGGTGTTTGGCACCAACATGCTGCATTTGAGCCCACTTCTTAA
Protein sequenceShow/hide protein sequence
MEKAMATFDNGTVCSAWNYSANRFATGLADGTLVIFDSPDPSSSSTSLTRTSSFKAHEAAIFKIVWVPPEYGDSVACICSDGSASLWEEIVEDAQPLQWKLCKRFKSNSS
QILDIQSGNSSSGLKMIVAFSDGHVKVYELMDPLDLKSWQLQAEFQNVIDSISTVRKASCLSASISWNPHRGERQQSSFVLAFNSDTPQLNSAKVWEFDQAHQRWLPVAE
LALASDKGDEVYAVAWAQNIGRPHEVIAVATQKGIAIWRLGLNPGTDGRLSTERVALLSGHHGEVWEMEWDMGGMTLASTGKDMMVRLWQSNLNGVWHQHAAFEPTS