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Spg029769 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg029769
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionClassical arabinogalactan protein 9
Genome locationscaffold6:11497891..11498394
RNA-Seq ExpressionSpg029769
SyntenySpg029769
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053440.1 classical arabinogalactan protein 9 [Cucumis melo var. makuwa]1.5e-4379.64Show/hide
Query:  MGFHFLIVFALFATSSMAQAPTGAPAQPPTTPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPPTATPPPSSPPSQPPASPPTSPAPAGPTSSPTPP
        MGF F++  ALFATS MAQAP  APAQPP+TPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPP A+ PPSSPPSQPPASPPTSP P+ P+S PT P
Subjt:  MGFHFLIVFALFATSSMAQAPTGAPAQPPTTPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPPTATPPPSSPPSQPPASPPTSPAPAGPTSSPTPP

Query:  PKEGPASSPSSPSSSPPAPPPEGNVPVASPGPNSPPPPPEGNGAATVSRAVMVGGAVAGAFLAAVFA
        PKEGP    S P+SSPP+PPPEGNVP  SPGP+ PPPPPEGNGAA+VSR +MVGGAVAGAFLA +FA
Subjt:  PKEGPASSPSSPSSSPPAPPPEGNVPVASPGPNSPPPPPEGNGAATVSRAVMVGGAVAGAFLAAVFA

KAG6600667.1 hypothetical protein SDJN03_05900, partial [Cucurbita argyrosperma subsp. sororia]3.1e-3673.74Show/hide
Query:  MGFHFLIVFALFATSSMAQAPTGAPAQPPTTPAVPPPSTPPPAASPPPA------TPPPATPPPATPPPATPPTATPPPSSPPSQPPASPPTSPAPAGPT
        MG  FL+V A  ATSSMAQAP  APAQPPTTPAVPPPSTPPPAASPPPA      TPPPATPPPATPPPATPP ATPP ++PPSQPPA+PPTSPA   PT
Subjt:  MGFHFLIVFALFATSSMAQAPTGAPAQPPTTPAVPPPSTPPPAASPPPA------TPPPATPPPATPPPATPPTATPPPSSPPSQPPASPPTSPAPAGPT

Query:  SSPTPPPKEGPASSPS-----SPS-SSPPAPPPEGNVPVASPGPNSPPPPPEGNGAATVSRAVMVGGAVAGAFLAAVFA
        SSPTPPPKEGPASSPS     SPS +SPP+PP EGNVP  +PGPN+ PPPPE NGA ++SR  MVG AV+G  LA VFA
Subjt:  SSPTPPPKEGPASSPS-----SPS-SSPPAPPPEGNVPVASPGPNSPPPPPEGNGAATVSRAVMVGGAVAGAFLAAVFA

TYK14854.1 vegetative cell wall protein gp1 [Cucumis melo var. makuwa]6.8e-4479.64Show/hide
Query:  MGFHFLIVFALFATSSMAQAPTGAPAQPPTTPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPPTATPPPSSPPSQPPASPPTSPAPAGPTSSPTPP
        MGF F++  ALFATS MAQAP  APAQPP+TPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPP A+ PPSSPPSQPPASPPTSP P+ P+S PT P
Subjt:  MGFHFLIVFALFATSSMAQAPTGAPAQPPTTPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPPTATPPPSSPPSQPPASPPTSPAPAGPTSSPTPP

Query:  PKEGPASSPSSPSSSPPAPPPEGNVPVASPGPNSPPPPPEGNGAATVSRAVMVGGAVAGAFLAAVFA
        PKEGP    S P+SSPP+PPPEGNVP +SPGP+ PPPPPEGNGAA+VSR +MVGGAVAGAFLA +FA
Subjt:  PKEGPASSPSSPSSSPPAPPPEGNVPVASPGPNSPPPPPEGNGAATVSRAVMVGGAVAGAFLAAVFA

XP_008455676.1 PREDICTED: vegetative cell wall protein gp1 [Cucumis melo]6.8e-4479.64Show/hide
Query:  MGFHFLIVFALFATSSMAQAPTGAPAQPPTTPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPPTATPPPSSPPSQPPASPPTSPAPAGPTSSPTPP
        MGF F++  ALFATS MAQAP  APAQPP+TPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPP A+ PPSSPPSQPPASPPTSP P+ P+S PT P
Subjt:  MGFHFLIVFALFATSSMAQAPTGAPAQPPTTPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPPTATPPPSSPPSQPPASPPTSPAPAGPTSSPTPP

Query:  PKEGPASSPSSPSSSPPAPPPEGNVPVASPGPNSPPPPPEGNGAATVSRAVMVGGAVAGAFLAAVFA
        PKEGP    S P+SSPP+PPPEGNVP +SPGP+ PPPPPEGNGAA+VSR +MVGGAVAGAFLA +FA
Subjt:  PKEGPASSPSSPSSSPPAPPPEGNVPVASPGPNSPPPPPEGNGAATVSRAVMVGGAVAGAFLAAVFA

XP_023545089.1 classical arabinogalactan protein 4-like [Cucurbita pepo subsp. pepo]3.6e-3774.01Show/hide
Query:  MGFHFLIVFALFATSSMAQAPTGAPAQPPTTPAVPPPSTPPPAASPPP------ATPPPATPPPATPPPATPPTATP----PPSSPPSQPPASPPTSPAP
        MG  FL++ A  ATSSMAQAP  APAQPPTTPAVPPPSTPPPAASPPP      ATPPPATPPPATPPPATPP ATP    PPSSPPSQPPA+PPTSPA 
Subjt:  MGFHFLIVFALFATSSMAQAPTGAPAQPPTTPAVPPPSTPPPAASPPP------ATPPPATPPPATPPPATPPTATP----PPSSPPSQPPASPPTSPAP

Query:  AGPTSSPTPPPKEGPASSPSSPSSSPPAPPPEGNVPVASPGPNSPPPPPEGNGAATVSRAVMVGGAVAGAFLAAVFA
          PTSSPTPPPKEGPASSPS  ++SPP+PP EGNVP  +PGPN+ PPPPE NGA ++SR  MVG AV+G  LA VFA
Subjt:  AGPTSSPTPPPKEGPASSPSSPSSSPPAPPPEGNVPVASPGPNSPPPPPEGNGAATVSRAVMVGGAVAGAFLAAVFA

TrEMBL top hitse value%identityAlignment
A0A0A0L0L1 Uncharacterized protein5.6e-4480.24Show/hide
Query:  MGFHFLIVFALFATSSMAQAPTGAPAQPPTTPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPPTATPPPSSPPSQPPASPPTSPAPAGPTSSPTPP
        MGF F++  ALFATS MAQAP  APAQPP+TPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPP A+ PPSSPPSQPPASPPTSP P+ P+S PT P
Subjt:  MGFHFLIVFALFATSSMAQAPTGAPAQPPTTPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPPTATPPPSSPPSQPPASPPTSPAPAGPTSSPTPP

Query:  PKEGPASSPSSPSSSPPAPPPEGNVPVASPGPNSPPPPPEGNGAATVSRAVMVGGAVAGAFLAAVFA
        PKEGP    S P+SSPP+PPPEGNVP  SPGP+ PPPPPEGNGAA+VSR +MVGGAVAGAFLA VFA
Subjt:  PKEGPASSPSSPSSSPPAPPPEGNVPVASPGPNSPPPPPEGNGAATVSRAVMVGGAVAGAFLAAVFA

A0A1S3C1K1 vegetative cell wall protein gp13.3e-4479.64Show/hide
Query:  MGFHFLIVFALFATSSMAQAPTGAPAQPPTTPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPPTATPPPSSPPSQPPASPPTSPAPAGPTSSPTPP
        MGF F++  ALFATS MAQAP  APAQPP+TPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPP A+ PPSSPPSQPPASPPTSP P+ P+S PT P
Subjt:  MGFHFLIVFALFATSSMAQAPTGAPAQPPTTPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPPTATPPPSSPPSQPPASPPTSPAPAGPTSSPTPP

Query:  PKEGPASSPSSPSSSPPAPPPEGNVPVASPGPNSPPPPPEGNGAATVSRAVMVGGAVAGAFLAAVFA
        PKEGP    S P+SSPP+PPPEGNVP +SPGP+ PPPPPEGNGAA+VSR +MVGGAVAGAFLA +FA
Subjt:  PKEGPASSPSSPSSSPPAPPPEGNVPVASPGPNSPPPPPEGNGAATVSRAVMVGGAVAGAFLAAVFA

A0A5A7UE17 Classical arabinogalactan protein 97.3e-4479.64Show/hide
Query:  MGFHFLIVFALFATSSMAQAPTGAPAQPPTTPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPPTATPPPSSPPSQPPASPPTSPAPAGPTSSPTPP
        MGF F++  ALFATS MAQAP  APAQPP+TPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPP A+ PPSSPPSQPPASPPTSP P+ P+S PT P
Subjt:  MGFHFLIVFALFATSSMAQAPTGAPAQPPTTPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPPTATPPPSSPPSQPPASPPTSPAPAGPTSSPTPP

Query:  PKEGPASSPSSPSSSPPAPPPEGNVPVASPGPNSPPPPPEGNGAATVSRAVMVGGAVAGAFLAAVFA
        PKEGP    S P+SSPP+PPPEGNVP  SPGP+ PPPPPEGNGAA+VSR +MVGGAVAGAFLA +FA
Subjt:  PKEGPASSPSSPSSSPPAPPPEGNVPVASPGPNSPPPPPEGNGAATVSRAVMVGGAVAGAFLAAVFA

A0A5D3CV77 Vegetative cell wall protein gp13.3e-4479.64Show/hide
Query:  MGFHFLIVFALFATSSMAQAPTGAPAQPPTTPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPPTATPPPSSPPSQPPASPPTSPAPAGPTSSPTPP
        MGF F++  ALFATS MAQAP  APAQPP+TPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPP A+ PPSSPPSQPPASPPTSP P+ P+S PT P
Subjt:  MGFHFLIVFALFATSSMAQAPTGAPAQPPTTPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPPTATPPPSSPPSQPPASPPTSPAPAGPTSSPTPP

Query:  PKEGPASSPSSPSSSPPAPPPEGNVPVASPGPNSPPPPPEGNGAATVSRAVMVGGAVAGAFLAAVFA
        PKEGP    S P+SSPP+PPPEGNVP +SPGP+ PPPPPEGNGAA+VSR +MVGGAVAGAFLA +FA
Subjt:  PKEGPASSPSSPSSSPPAPPPEGNVPVASPGPNSPPPPPEGNGAATVSRAVMVGGAVAGAFLAAVFA

A0A6J1J5L5 classical arabinogalactan protein 4-like2.5e-3675.6Show/hide
Query:  MGFHFLIVFALFATSSMAQAPTGAPAQPPTTPAVPPPSTPPPAASPPPATPPP-ATPPPATPPPATPPTATPPPSSPPSQPPASPPTSPAPAGPTSSPTP
        MGF F++V ALFATSSMAQAP  APAQPPTTPAVPPPSTPPP  +  PATPPP ATPPPATPPPA  P  + PPSSPP+QPPASPPT         SPTP
Subjt:  MGFHFLIVFALFATSSMAQAPTGAPAQPPTTPAVPPPSTPPPAASPPPATPPP-ATPPPATPPPATPPTATPPPSSPPSQPPASPPTSPAPAGPTSSPTP

Query:  PPKEGPASSPSSPSSSPPAPPPEGNVPVASPGPNSPPPPPEGNGAATVSRAVMVGGAVAGAFLAAVFA
        PPKEGPASSP+  S+SPP+PP EG VP ASPGPNSPPPPP  NGAATVSR VMVGGAVAGA LA VFA
Subjt:  PPKEGPASSPSSPSSSPPAPPPEGNVPVASPGPNSPPPPPEGNGAATVSRAVMVGGAVAGAFLAAVFA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTCCATTTTCTCATCGTTTTCGCCTTATTCGCTACTTCTTCCATGGCTCAGGCTCCCACTGGTGCTCCGGCTCAGCCACCCACCACCCCCGCCGTCCCCCCGCC
GTCTACTCCTCCTCCCGCCGCCTCCCCACCTCCCGCCACCCCTCCTCCGGCCACCCCACCACCGGCAACCCCACCACCGGCCACCCCACCAACCGCCACTCCCCCACCAT
CATCGCCCCCGAGCCAACCGCCAGCTTCACCTCCTACATCTCCGGCGCCGGCAGGACCGACCTCCTCTCCGACTCCGCCACCGAAGGAGGGTCCGGCCTCATCTCCGTCT
TCACCCTCTTCCTCGCCGCCGGCACCACCACCGGAAGGAAATGTCCCGGTCGCCAGCCCTGGACCCAACTCGCCGCCACCCCCACCGGAAGGAAATGGCGCCGCCACCGT
TAGCCGGGCAGTCATGGTCGGTGGTGCTGTGGCCGGAGCTTTCTTGGCAGCGGTGTTTGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTCCATTTTCTCATCGTTTTCGCCTTATTCGCTACTTCTTCCATGGCTCAGGCTCCCACTGGTGCTCCGGCTCAGCCACCCACCACCCCCGCCGTCCCCCCGCC
GTCTACTCCTCCTCCCGCCGCCTCCCCACCTCCCGCCACCCCTCCTCCGGCCACCCCACCACCGGCAACCCCACCACCGGCCACCCCACCAACCGCCACTCCCCCACCAT
CATCGCCCCCGAGCCAACCGCCAGCTTCACCTCCTACATCTCCGGCGCCGGCAGGACCGACCTCCTCTCCGACTCCGCCACCGAAGGAGGGTCCGGCCTCATCTCCGTCT
TCACCCTCTTCCTCGCCGCCGGCACCACCACCGGAAGGAAATGTCCCGGTCGCCAGCCCTGGACCCAACTCGCCGCCACCCCCACCGGAAGGAAATGGCGCCGCCACCGT
TAGCCGGGCAGTCATGGTCGGTGGTGCTGTGGCCGGAGCTTTCTTGGCAGCGGTGTTTGCTTAA
Protein sequenceShow/hide protein sequence
MGFHFLIVFALFATSSMAQAPTGAPAQPPTTPAVPPPSTPPPAASPPPATPPPATPPPATPPPATPPTATPPPSSPPSQPPASPPTSPAPAGPTSSPTPPPKEGPASSPS
SPSSSPPAPPPEGNVPVASPGPNSPPPPPEGNGAATVSRAVMVGGAVAGAFLAAVFA