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Spg029773 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg029773
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationscaffold6:12915777..12919149
RNA-Seq ExpressionSpg029773
SyntenySpg029773
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFS38892.1 hypothetical protein Acr_00g0060010 [Actinidia rufa]1.6e-1142.86Show/hide
Query:  AEAAAKAKVEADAEAMARAETDPDKWNKNKYCVFHRDHGHTTRNCIQLRDELESLIKEGYLKEFVRGEESKRPRPTREDRDEGNNDPSL-EIKTILGG
        A+  +K K E   +   + +TDP K N+NKYC FHRDHGH T++C QL++++  LIK GYL++++    + RP P   +R  G+N P+  +I+TI GG
Subjt:  AEAAAKAKVEADAEAMARAETDPDKWNKNKYCVFHRDHGHTTRNCIQLRDELESLIKEGYLKEFVRGEESKRPRPTREDRDEGNNDPSL-EIKTILGG

GFY96755.1 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein [Actinidia rufa]7.2e-1244.9Show/hide
Query:  AEAAAKAKVEADAEAMARAETDPDKWNKNKYCVFHRDHGHTTRNCIQLRDELESLIKEGYLKEFVRGEESKRPRPTREDRDEGNNDPSL-EIKTILGG
        A+  ++ K E   +   + +TDP K NKNKYC FHRDHGH T +C QL++++  LIK GYL+++V    + RPRP   +R  G+N P+   I+TI GG
Subjt:  AEAAAKAKVEADAEAMARAETDPDKWNKNKYCVFHRDHGHTTRNCIQLRDELESLIKEGYLKEFVRGEESKRPRPTREDRDEGNNDPSL-EIKTILGG

GFZ10151.1 hypothetical protein Acr_21g0007500 [Actinidia rufa]1.6e-1143.88Show/hide
Query:  AEAAAKAKVEADAEAMARAETDPDKWNKNKYCVFHRDHGHTTRNCIQLRDELESLIKEGYLKEFVRGEESKRPRPTREDRDEGNNDPSL-EIKTILGG
        A+  ++ K E   +   + +TDP K N+NKYC FHRDHGH T NC QLR+++  LIK GYL++++    + RP P   +R  G+N P+   I+TI GG
Subjt:  AEAAAKAKVEADAEAMARAETDPDKWNKNKYCVFHRDHGHTTRNCIQLRDELESLIKEGYLKEFVRGEESKRPRPTREDRDEGNNDPSL-EIKTILGG

GFZ10155.1 hypothetical protein Acr_21g0007540 [Actinidia rufa]4.2e-1244.9Show/hide
Query:  AEAAAKAKVEADAEAMARAETDPDKWNKNKYCVFHRDHGHTTRNCIQLRDELESLIKEGYLKEFVRGEESKRPRPTREDRDEGNNDPSL-EIKTILGG
        A+  ++ K E   +   + +TDP K N+NKYC FHRDHGH T NC QLR+++  LIKEGYL++++    + RP P   +R  G+N P+   I+TI GG
Subjt:  AEAAAKAKVEADAEAMARAETDPDKWNKNKYCVFHRDHGHTTRNCIQLRDELESLIKEGYLKEFVRGEESKRPRPTREDRDEGNNDPSL-EIKTILGG

XP_022151636.1 uncharacterized protein LOC111019544 [Momordica charantia]1.2e-1141.67Show/hide
Query:  RAETDPDKWNKNKYCVFHRDHGHTTRNCIQLRDELESLIKEGYLKEFVRGEESKRPRPTREDRDEGNNDPSLEIKTILGGQSKKESNRLVKMSLLE
        R +  P+K +K +YC+FHRDHGH T +C  L++E+E  I +GYLKE++     + P+ T+   ++ N  P+ EI+TI+GG ++ ES R  K+S+ E
Subjt:  RAETDPDKWNKNKYCVFHRDHGHTTRNCIQLRDELESLIKEGYLKEFVRGEESKRPRPTREDRDEGNNDPSLEIKTILGGQSKKESNRLVKMSLLE

TrEMBL top hitse value%identityAlignment
A0A6J1DF96 uncharacterized protein LOC1110195445.9e-1241.67Show/hide
Query:  RAETDPDKWNKNKYCVFHRDHGHTTRNCIQLRDELESLIKEGYLKEFVRGEESKRPRPTREDRDEGNNDPSLEIKTILGGQSKKESNRLVKMSLLE
        R +  P+K +K +YC+FHRDHGH T +C  L++E+E  I +GYLKE++     + P+ T+   ++ N  P+ EI+TI+GG ++ ES R  K+S+ E
Subjt:  RAETDPDKWNKNKYCVFHRDHGHTTRNCIQLRDELESLIKEGYLKEFVRGEESKRPRPTREDRDEGNNDPSLEIKTILGGQSKKESNRLVKMSLLE

A0A7J0DN97 Ribonuclease H7.7e-1242.86Show/hide
Query:  AEAAAKAKVEADAEAMARAETDPDKWNKNKYCVFHRDHGHTTRNCIQLRDELESLIKEGYLKEFVRGEESKRPRPTREDRDEGNNDPSL-EIKTILGG
        A+  +K K E   +   + +TDP K N+NKYC FHRDHGH T++C QL++++  LIK GYL++++    + RP P   +R  G+N P+  +I+TI GG
Subjt:  AEAAAKAKVEADAEAMARAETDPDKWNKNKYCVFHRDHGHTTRNCIQLRDELESLIKEGYLKEFVRGEESKRPRPTREDRDEGNNDPSL-EIKTILGG

A0A7J0FDJ8 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein3.5e-1244.9Show/hide
Query:  AEAAAKAKVEADAEAMARAETDPDKWNKNKYCVFHRDHGHTTRNCIQLRDELESLIKEGYLKEFVRGEESKRPRPTREDRDEGNNDPSL-EIKTILGG
        A+  ++ K E   +   + +TDP K NKNKYC FHRDHGH T +C QL++++  LIK GYL+++V    + RPRP   +R  G+N P+   I+TI GG
Subjt:  AEAAAKAKVEADAEAMARAETDPDKWNKNKYCVFHRDHGHTTRNCIQLRDELESLIKEGYLKEFVRGEESKRPRPTREDRDEGNNDPSL-EIKTILGG

A0A7J0GHA7 Uncharacterized protein2.0e-1244.9Show/hide
Query:  AEAAAKAKVEADAEAMARAETDPDKWNKNKYCVFHRDHGHTTRNCIQLRDELESLIKEGYLKEFVRGEESKRPRPTREDRDEGNNDPSL-EIKTILGG
        A+  ++ K E   +   + +TDP K N+NKYC FHRDHGH T NC QLR+++  LIKEGYL++++    + RP P   +R  G+N P+   I+TI GG
Subjt:  AEAAAKAKVEADAEAMARAETDPDKWNKNKYCVFHRDHGHTTRNCIQLRDELESLIKEGYLKEFVRGEESKRPRPTREDRDEGNNDPSL-EIKTILGG

A0A7J0GHF0 Uncharacterized protein7.7e-1243.88Show/hide
Query:  AEAAAKAKVEADAEAMARAETDPDKWNKNKYCVFHRDHGHTTRNCIQLRDELESLIKEGYLKEFVRGEESKRPRPTREDRDEGNNDPSL-EIKTILGG
        A+  ++ K E   +   + +TDP K N+NKYC FHRDHGH T NC QLR+++  LIK GYL++++    + RP P   +R  G+N P+   I+TI GG
Subjt:  AEAAAKAKVEADAEAMARAETDPDKWNKNKYCVFHRDHGHTTRNCIQLRDELESLIKEGYLKEFVRGEESKRPRPTREDRDEGNNDPSL-EIKTILGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAAGAAAACCCAGTAGGCGATGGAGGTCCTCGGCCTCACGCTAATCCACAGGACATGGAGATGGAAGTTAATGAGATGAGACAGAGTTTGGCCAAGATT
TTGAACATCCTGAAGCAACCGAATCCCGGCACGAAGTGGCAAAAAAGCTTCGTGCGCGATCGAGAGAAAGGGAAAGGAGTCTTAGATGAGGAAGAAAGGGAAACA
GATAGCGTTACTAGCAAGCTGCGACAACCCGATGGAAGCAAAGAATTTGACCTGAAGGGGCCAGGGCCGAGCAAATGGGTAGCGCGCAAAGACACACTTGACTTT
CCAGATGAAACCAGTACAGTGGGTTCGGACAGGAAGACCGAGACCGAGGTCGAGGCCAAAATTCGGGAGAAGATTGAACTTGAGACGAAGATCCGGGCCGGGGTT
GAGTTTAAGCTTAGGGCCGAAGCCGAAGCCGCGGCCAAAGCTAAGGTCGAGGCTGATGCCGAGGCCATGGCTAGGGCTGAAACGGATCCTGACAAGTGGAATAAA
AACAAGTATTGCGTGTTTCATCGGGACCATGGACATACAACTCGCAATTGCATACAACTTCGAGACGAGCTAGAAAGTCTGATCAAGGAAGGATACCTGAAGGAG
TTTGTCAGGGGTGAGGAGAGCAAGAGGCCGAGGCCAACCAGAGAAGATCGTGACGAAGGAAATAATGATCCATCGTTGGAAATCAAAACCATTTTGGGAGGACAG
TCGAAAAAGGAAAGCAATCGACTTGTAAAAATGTCCTTGTTGGAGTGGCAACGCCTATACTCCCAAGGTTCTCTGGTGGAGTGGCAACGCCTATACTCCCCGAGT
GGCAACGCCTATACTCCCAAGGTTCCCGGTGGAGTGGCAACACCTATACTCCCCGAGACCCTCGGGAACGGAGCCAAGGCCCCAATCGGAGCCGTACCAATAGAC
GAAGGTGTGGAGGCATTAAAGCTTCAAGGCGCGGACTTAAGAAGTGAAGTTGACAGCCTCTTTGGCAGATTGAATATGTACCTTTTTCTTCCTTGTCTTTTATGT
GCAAAAAAGATGGTGTGTCCTAGTGAAAGTATTTGCTCTACCTTAGTTGGCCAAGCTTGTGGTCGGCCTCGGCATGTTTCTAGAGCCGACCACGCTCGTTTGTTT
CAGTTTAATCTTATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAAGAAAACCCAGTAGGCGATGGAGGTCCTCGGCCTCACGCTAATCCACAGGACATGGAGATGGAAGTTAATGAGATGAGACAGAGTTTGGCCAAGATT
TTGAACATCCTGAAGCAACCGAATCCCGGCACGAAGTGGCAAAAAAGCTTCGTGCGCGATCGAGAGAAAGGGAAAGGAGTCTTAGATGAGGAAGAAAGGGAAACA
GATAGCGTTACTAGCAAGCTGCGACAACCCGATGGAAGCAAAGAATTTGACCTGAAGGGGCCAGGGCCGAGCAAATGGGTAGCGCGCAAAGACACACTTGACTTT
CCAGATGAAACCAGTACAGTGGGTTCGGACAGGAAGACCGAGACCGAGGTCGAGGCCAAAATTCGGGAGAAGATTGAACTTGAGACGAAGATCCGGGCCGGGGTT
GAGTTTAAGCTTAGGGCCGAAGCCGAAGCCGCGGCCAAAGCTAAGGTCGAGGCTGATGCCGAGGCCATGGCTAGGGCTGAAACGGATCCTGACAAGTGGAATAAA
AACAAGTATTGCGTGTTTCATCGGGACCATGGACATACAACTCGCAATTGCATACAACTTCGAGACGAGCTAGAAAGTCTGATCAAGGAAGGATACCTGAAGGAG
TTTGTCAGGGGTGAGGAGAGCAAGAGGCCGAGGCCAACCAGAGAAGATCGTGACGAAGGAAATAATGATCCATCGTTGGAAATCAAAACCATTTTGGGAGGACAG
TCGAAAAAGGAAAGCAATCGACTTGTAAAAATGTCCTTGTTGGAGTGGCAACGCCTATACTCCCAAGGTTCTCTGGTGGAGTGGCAACGCCTATACTCCCCGAGT
GGCAACGCCTATACTCCCAAGGTTCCCGGTGGAGTGGCAACACCTATACTCCCCGAGACCCTCGGGAACGGAGCCAAGGCCCCAATCGGAGCCGTACCAATAGAC
GAAGGTGTGGAGGCATTAAAGCTTCAAGGCGCGGACTTAAGAAGTGAAGTTGACAGCCTCTTTGGCAGATTGAATATGTACCTTTTTCTTCCTTGTCTTTTATGT
GCAAAAAAGATGGTGTGTCCTAGTGAAAGTATTTGCTCTACCTTAGTTGGCCAAGCTTGTGGTCGGCCTCGGCATGTTTCTAGAGCCGACCACGCTCGTTTGTTT
CAGTTTAATCTTATTTAG
Protein sequenceShow/hide protein sequence
MEKENPVGDGGPRPHANPQDMEMEVNEMRQSLAKILNILKQPNPGTKWQKSFVRDREKGKGVLDEEERETDSVTSKLRQPDGSKEFDLKGPGPSKWVARKDTLDF
PDETSTVGSDRKTETEVEAKIREKIELETKIRAGVEFKLRAEAEAAAKAKVEADAEAMARAETDPDKWNKNKYCVFHRDHGHTTRNCIQLRDELESLIKEGYLKE
FVRGEESKRPRPTREDRDEGNNDPSLEIKTILGGQSKKESNRLVKMSLLEWQRLYSQGSLVEWQRLYSPSGNAYTPKVPGGVATPILPETLGNGAKAPIGAVPID
EGVEALKLQGADLRSEVDSLFGRLNMYLFLPCLLCAKKMVCPSESICSTLVGQACGRPRHVSRADHARLFQFNLI