CuGenDBv2

Gene ID	Spg029825
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	DNA-directed RNA polymerase III subunit RPC5
Genome location	scaffold6:9872961..9879028
RNA-Seq Expression	Spg029825
Synteny	Spg029825
Gene Ontology terms	GO:0006351 - transcription, DNA-templated (biological process) GO:0005666 - RNA polymerase III complex (cellular component) GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domains	IPR006886 - DNA-directed RNA polymerase III subunit Rpc5

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022136590.1 DNA-directed RNA polymerase III subunit RPC5 [Momordica charantia]

3.3e-192

89.18

Show/hide

Query:  DYMDSLCPGASTSSNKPKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARDFVLS
        DYM+SLCPGA TSS KP+GPSKRYLLSLSL+ERIKKLLSEGPP+QRFSALKHYAPDYEA+EFIE+LQQYAQ VQGLWV KSSFLLPQDG GRCARDFVL 
Subjt:  DYMDSLCPGASTSSNKPKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARDFVLS

Query:  LFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPELVPKPE
        LFSKNP+++SSQINVPKSLRDK KHFLNLF VERPAFKDWKF+EKTDRSFLNNYLDIVQKQEK+WRSVEEGITNSFRGSVKS   ANAATGKP++VPK E
Subjt:  LFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPELVPKPE

Query:  KQVSHDKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKVISQVATEIHGL
        KQVS DKATTKSS+A LNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARM VAAAYGVDAPPDELKK+I QVATEIHGL
Subjt:  KQVSHDKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKVISQVATEIHGL

Query:  YVLTSSPEHPEYDPLRKVVIQLFLGRGPKAVLKRADVWEASQRELGRGFNSNEYSKVMNEICVSHGSSWVLKSGDGNSR
        YV+TSSPEHPEYDPLRKV+IQL  GRGPKAVLK+ADV EAS+RELGR  NSNEY+KVMNEICVSHGSSWVLKSGDGNSR
Subjt:  YVLTSSPEHPEYDPLRKVVIQLFLGRGPKAVLKRADVWEASQRELGRGFNSNEYSKVMNEICVSHGSSWVLKSGDGNSR

XP_022929283.1 DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucurbita moschata]

7.1e-195

90.53

Show/hide

Query:  HDYMDSLCPGASTSSNKPKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARDFVL
        HDY+DSLCPGAS+S NKPKGPSKR+LLSLSLEERIKKLL+EGPPIQRFSALKHYAPDYE DEFIE+LQQYAQSVQGLWV KSSFLLPQDGSGRCARDFVL
Subjt:  HDYMDSLCPGASTSSNKPKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARDFVL

Query:  SLFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPELVPKP
        SLFSKNPVV+SSQINVPKSLRDKVKHFLN FGVERPAFKDW+FKEKTDR FLNNY+DIVQKQEKVWRSVEEGITNSFRGSVK++  ANAA  KPE+VPKP
Subjt:  SLFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPELVPKP

Query:  EKQVSHDKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKVISQVATEIHG
        EKQV HDKA+TKSSNAALNRKSTMSDETREALPKALQKLFQ HKVCSFQLICQGLRDLAVSQSTLPKADARM VAAAYGVDAPPDELK++I QVATEIHG
Subjt:  EKQVSHDKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKVISQVATEIHG

Query:  LYVLTSSPEHPEYDPLRKVVIQLFLGRGPKAVLKRADVWEASQRELGRGFNSNEYSKVMNEICVSHGSSWVLKSGDGNSR
        LYVLTSSPEHPEYDPLRKVVIQL  GRGPKAVLK+ADV EAS+RELGR  NSNEYSKVMNEICVSHGS+W LKSGDGNSR
Subjt:  LYVLTSSPEHPEYDPLRKVVIQLFLGRGPKAVLKRADVWEASQRELGRGFNSNEYSKVMNEICVSHGSSWVLKSGDGNSR

XP_022985072.1 DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucurbita maxima]

3.2e-195

90.79

Show/hide

Query:  HDYMDSLCPGASTSSNKPKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARDFVL
        HDY+DSLCPGAS+S NKPKGPSKR+LLSLSLEERIKKLL+EGPPIQRFSALKHYAPDYE DEFIE+LQQYAQSVQGLWV KSSFLLPQDGSGRCARDFVL
Subjt:  HDYMDSLCPGASTSSNKPKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARDFVL

Query:  SLFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPELVPKP
        SLFSKNPVV+SSQINVPKSLRDKVKHFLN FGVERPAFKDW+FKEKTDR FLNNY+DIVQKQEKVWRSVEEGITNSFRGSVK++  ANAA  KPE+VPKP
Subjt:  SLFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPELVPKP

Query:  EKQVSHDKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKVISQVATEIHG
        EKQV HDKA+TKSSNAALNRKSTMSDETREALPKALQKLFQ HKVCSFQLICQGLRDLAVSQSTLPKADARM VAAAYGVDAPPDELK++I QVATEIHG
Subjt:  EKQVSHDKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKVISQVATEIHG

Query:  LYVLTSSPEHPEYDPLRKVVIQLFLGRGPKAVLKRADVWEASQRELGRGFNSNEYSKVMNEICVSHGSSWVLKSGDGNSR
        LYVLTSSPEHPEYDPLRKVVIQL  GRGPKAVLK+ADV EAS+RELGR  NSNEYSKVMNEICVSHGSSW LKSGDGNSR
Subjt:  LYVLTSSPEHPEYDPLRKVVIQLFLGRGPKAVLKRADVWEASQRELGRGFNSNEYSKVMNEICVSHGSSWVLKSGDGNSR

XP_023552355.1 DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Cucurbita pepo subsp. pepo]

1.8e-193

Show/hide

Query:  HDYMDSLCPGASTSSNKPKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARDFVL
        HDY+DSLCPGAS+S NKPKGPSKR+LLSLSLEERIKKLL+EGPPI+RFSALKHYAPDYE DEFIE+LQQYAQSVQGLWV KSSFLLPQDGSGRCARDFVL
Subjt:  HDYMDSLCPGASTSSNKPKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARDFVL

Query:  SLFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPELVPKP
        SLFSKNPVV+SSQINVPKSLRDKVKHFLN FGVERPAFKDW+FKEKTDR FLNNY+DIVQKQEKVWRSVEEGITNSFRGSVK++  ANAA  KPE+VPKP
Subjt:  SLFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPELVPKP

Query:  EKQVSHDKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKVISQVATEIHG
        EKQV HDKA+TKSSNAALNR+STMSDETREALPKALQKLFQ HKVCSFQLICQGLRDLAVSQSTLPKADARM VAAAYGVDAPPDELK++I QVATEIHG
Subjt:  EKQVSHDKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKVISQVATEIHG

Query:  LYVLTSSPEHPEYDPLRKVVIQLFLGRGPKAVLKRADVWEASQRELGRGFNSNEYSKVMNEICVSHGSSWVLKSGDGNSR
        LYVLTSS EHPEYDPLRKVVIQL  GRGPKAVLK+ADV EAS+RELGR  NSNEYSKVMNEICVSHGSSW LKSGDGNSR
Subjt:  LYVLTSSPEHPEYDPLRKVVIQLFLGRGPKAVLKRADVWEASQRELGRGFNSNEYSKVMNEICVSHGSSWVLKSGDGNSR

XP_038876785.1 DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Benincasa hispida]

1.5e-192

89.71

Show/hide

Query:  DYMDSLCPGASTSSNKPKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARDFVLS
        DYMDSLCPG STSSNKPKGPSKRYLLSLSLEERIKKLL+EGPP+QRFSALKHYAPDYEA+EFIE+LQQYAQSVQGLWVPKSS LLPQD SGRCARDFVL+
Subjt:  DYMDSLCPGASTSSNKPKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARDFVLS

Query:  LFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPELVPKPE
        LFSKNPVV+SSQINVPKSLR+KVKHFLNLFGVERPAFKDWKFKEKTD  FL+NY+D+VQKQEK+WRSVEEGI+  F GS KSV  ANAATGKP++V KPE
Subjt:  LFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPELVPKPE

Query:  KQVSHDKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKVISQVATEIHGL
        KQVS+DKAT KSSNAALNRKSTMSDETREALPKALQKLF NHKVCSFQLICQGLRDLAVSQSTLPKADARM VAAAYGVDAPPDELKK+ISQVATEIHGL
Subjt:  KQVSHDKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKVISQVATEIHGL

Query:  YVLTSSPEHPEYDPLRKVVIQLFLGRGPKAVLKRADVWEASQRELGRGFNSNEYSKVMNEICVSHGSSWVLKSGDGNSR
        YVLTSSPEHPEYDPLRKVVIQL  GRGPKAVLK+ADV EAS+RELGRG  SNEYSKVMNEICVSHGSSW LKSGDGNSR
Subjt:  YVLTSSPEHPEYDPLRKVVIQLFLGRGPKAVLKRADVWEASQRELGRGFNSNEYSKVMNEICVSHGSSWVLKSGDGNSR

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TMP0 DNA-directed RNA polymerase III subunit RPC5 isoform X1

6.1e-184

85.53

Show/hide

Query:  HDYMDSLCPGASTSSNKPKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARDFVL
        HDYMDSLCPG STSSNKPKGPSK+YLLSLSLEERIKKLL+EGPP+QRFSALKHYAPDYEA+EF+E+LQQYAQ VQGLWVPKS FL+PQDGSGRCARDFVL
Subjt:  HDYMDSLCPGASTSSNKPKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARDFVL

Query:  SLFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPELVPKP
         LFSKNPVV+SSQINVPKSLRD+VKHFLNLFGVERPAFKDWKFKEKTD SFL+N++ IVQKQE+ W ++E+ +   F  S+KS P   A TGKP++VPKP
Subjt:  SLFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPELVPKP

Query:  EKQVSHDKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKVISQVATEIHG
        EKQVS DK TTKSSNA LNRK  MSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARM VAAAYGVDAPP+ELKK+ISQVATEIHG
Subjt:  EKQVSHDKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKVISQVATEIHG

Query:  LYVLTSSPEHPEYDPLRKVVIQLFLGRGPKAVLKRADVWEASQRELGRGFNSNEYSKVMNEICVSHGSSWVLKSGDGNSR
        LYVLTSSPEHPEYDPLRKVVIQL  GRGPKAVLK+ADV EAS+RELGR  NSNEYSKVMNEICVSHGSSW LKSGDGNSR
Subjt:  LYVLTSSPEHPEYDPLRKVVIQLFLGRGPKAVLKRADVWEASQRELGRGFNSNEYSKVMNEICVSHGSSWVLKSGDGNSR

A0A5D3CZA9 DNA-directed RNA polymerase III subunit RPC5 isoform X1

6.1e-184

85.53

Show/hide

Query:  HDYMDSLCPGASTSSNKPKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARDFVL
        HDYMDSLCPG STSSNKPKGPSK+YLLSLSLEERIKKLL+EGPP+QRFSALKHYAPDYEA+EF+E+LQQYAQ VQGLWVPKS FL+PQDGSGRCARDFVL
Subjt:  HDYMDSLCPGASTSSNKPKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARDFVL

Query:  SLFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPELVPKP
         LFSKNPVV+SSQINVPKSLRD+VKHFLNLFGVERPAFKDWKFKEKTD SFL+N++ IVQKQE+ W ++E+ +   F  S+KS P   A TGKP++VPKP
Subjt:  SLFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPELVPKP

Query:  EKQVSHDKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKVISQVATEIHG
        EKQVS DK TTKSSNA LNRK  MSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARM VAAAYGVDAPP+ELKK+ISQVATEIHG
Subjt:  EKQVSHDKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKVISQVATEIHG

Query:  LYVLTSSPEHPEYDPLRKVVIQLFLGRGPKAVLKRADVWEASQRELGRGFNSNEYSKVMNEICVSHGSSWVLKSGDGNSR
        LYVLTSSPEHPEYDPLRKVVIQL  GRGPKAVLK+ADV EAS+RELGR  NSNEYSKVMNEICVSHGSSW LKSGDGNSR
Subjt:  LYVLTSSPEHPEYDPLRKVVIQLFLGRGPKAVLKRADVWEASQRELGRGFNSNEYSKVMNEICVSHGSSWVLKSGDGNSR

A0A6J1C4C6 DNA-directed RNA polymerase III subunit RPC5

1.6e-192

89.18

Show/hide

Query:  DYMDSLCPGASTSSNKPKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARDFVLS
        DYM+SLCPGA TSS KP+GPSKRYLLSLSL+ERIKKLLSEGPP+QRFSALKHYAPDYEA+EFIE+LQQYAQ VQGLWV KSSFLLPQDG GRCARDFVL 
Subjt:  DYMDSLCPGASTSSNKPKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARDFVLS

Query:  LFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPELVPKPE
        LFSKNP+++SSQINVPKSLRDK KHFLNLF VERPAFKDWKF+EKTDRSFLNNYLDIVQKQEK+WRSVEEGITNSFRGSVKS   ANAATGKP++VPK E
Subjt:  LFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPELVPKPE

Query:  KQVSHDKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKVISQVATEIHGL
        KQVS DKATTKSS+A LNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARM VAAAYGVDAPPDELKK+I QVATEIHGL
Subjt:  KQVSHDKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKVISQVATEIHGL

Query:  YVLTSSPEHPEYDPLRKVVIQLFLGRGPKAVLKRADVWEASQRELGRGFNSNEYSKVMNEICVSHGSSWVLKSGDGNSR
        YV+TSSPEHPEYDPLRKV+IQL  GRGPKAVLK+ADV EAS+RELGR  NSNEY+KVMNEICVSHGSSWVLKSGDGNSR
Subjt:  YVLTSSPEHPEYDPLRKVVIQLFLGRGPKAVLKRADVWEASQRELGRGFNSNEYSKVMNEICVSHGSSWVLKSGDGNSR

A0A6J1EMD6 DNA-directed RNA polymerase III subunit RPC5 isoform X1

3.5e-195

90.53

Show/hide

Query:  HDYMDSLCPGASTSSNKPKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARDFVL
        HDY+DSLCPGAS+S NKPKGPSKR+LLSLSLEERIKKLL+EGPPIQRFSALKHYAPDYE DEFIE+LQQYAQSVQGLWV KSSFLLPQDGSGRCARDFVL
Subjt:  HDYMDSLCPGASTSSNKPKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARDFVL

Query:  SLFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPELVPKP
        SLFSKNPVV+SSQINVPKSLRDKVKHFLN FGVERPAFKDW+FKEKTDR FLNNY+DIVQKQEKVWRSVEEGITNSFRGSVK++  ANAA  KPE+VPKP
Subjt:  SLFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPELVPKP

Query:  EKQVSHDKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKVISQVATEIHG
        EKQV HDKA+TKSSNAALNRKSTMSDETREALPKALQKLFQ HKVCSFQLICQGLRDLAVSQSTLPKADARM VAAAYGVDAPPDELK++I QVATEIHG
Subjt:  EKQVSHDKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKVISQVATEIHG

Query:  LYVLTSSPEHPEYDPLRKVVIQLFLGRGPKAVLKRADVWEASQRELGRGFNSNEYSKVMNEICVSHGSSWVLKSGDGNSR
        LYVLTSSPEHPEYDPLRKVVIQL  GRGPKAVLK+ADV EAS+RELGR  NSNEYSKVMNEICVSHGS+W LKSGDGNSR
Subjt:  LYVLTSSPEHPEYDPLRKVVIQLFLGRGPKAVLKRADVWEASQRELGRGFNSNEYSKVMNEICVSHGSSWVLKSGDGNSR

A0A6J1JCH8 DNA-directed RNA polymerase III subunit RPC5 isoform X1

1.6e-195

90.79

Show/hide

Query:  HDYMDSLCPGASTSSNKPKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARDFVL
        HDY+DSLCPGAS+S NKPKGPSKR+LLSLSLEERIKKLL+EGPPIQRFSALKHYAPDYE DEFIE+LQQYAQSVQGLWV KSSFLLPQDGSGRCARDFVL
Subjt:  HDYMDSLCPGASTSSNKPKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARDFVL

Query:  SLFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPELVPKP
        SLFSKNPVV+SSQINVPKSLRDKVKHFLN FGVERPAFKDW+FKEKTDR FLNNY+DIVQKQEKVWRSVEEGITNSFRGSVK++  ANAA  KPE+VPKP
Subjt:  SLFSKNPVVNSSQINVPKSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPELVPKP

Query:  EKQVSHDKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKVISQVATEIHG
        EKQV HDKA+TKSSNAALNRKSTMSDETREALPKALQKLFQ HKVCSFQLICQGLRDLAVSQSTLPKADARM VAAAYGVDAPPDELK++I QVATEIHG
Subjt:  EKQVSHDKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKVISQVATEIHG

Query:  LYVLTSSPEHPEYDPLRKVVIQLFLGRGPKAVLKRADVWEASQRELGRGFNSNEYSKVMNEICVSHGSSWVLKSGDGNSR
        LYVLTSSPEHPEYDPLRKVVIQL  GRGPKAVLK+ADV EAS+RELGR  NSNEYSKVMNEICVSHGSSW LKSGDGNSR
Subjt:  LYVLTSSPEHPEYDPLRKVVIQLFLGRGPKAVLKRADVWEASQRELGRGFNSNEYSKVMNEICVSHGSSWVLKSGDGNSR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G49530.1 SIN-like family protein

1.0e-82

44.41

Show/hide

Query:  YMDSLCPGASTSSNKPKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARDFVLSL
        Y++ LC G S+ +++ K   KR LLSL L+ER++KLL EG P+ R+S LKHYAP++  ++F+ +LQ+Y + VQGLW PK+  LL  DG    ARD+VLSL
Subjt:  YMDSLCPGASTSSNKPKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARDFVLSL

Query:  FSKNPVVNSSQINVP-KSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFR---GSVKSVPQANAATGKPELVP
        FS+N  +  S++      ++  ++  L  F  ER   KDWKFKE TD SF+ +Y +IV++Q+  W    E + +      G  ++  + N       +  
Subjt:  FSKNPVVNSSQINVP-KSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFR---GSVKSVPQANAATGKPELVP

Query:  KPEKQVS-HDKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKVISQVATE
        KPE   +  DK  +  +         M +E ++ALPKAL+K+FQ HKVC ++ ICQGLRDLAVS S  PKAD+ M V  A  VDA   EL+ VI+ VAT 
Subjt:  KPEKQVS-HDKATTKSSNAALNRKSTMSDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKVISQVATE

Query:  IHGLYVLTSSPEHPEYDPLRKVVIQLFLGRGPKAVLKRADVWEASQRELGRGFNSNEYSKVMNEICVSHGSSWVLK
        IHG YV  SSP+HPEYD LR+VVI L  G  P   L +A+V+ A + +L R   +NEY KVM+EIC ++ S WVL+
Subjt:  IHGLYVLTSSPEHPEYDPLRKVVIQLFLGRGPKAVLKRADVWEASQRELGRGFNSNEYSKVMNEICVSHGSSWVLK

Sequences

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CDS sequence

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ATGGAGACGGGGTGGAAGCAGCGGTTGGATAGTGGTGAACGAACTGTGTTGGAGGGAGGCAATTGTGAAAGGAAGATGAGAACAACAAAAGGTAACCCTAATTACATGGG
CCAGACATTCATGGGTGAGCTGAGTTTAATTGAATTAGTGAAGCCCATTACTTGTCAATTGAAGGAAATCCAGAGGGTTTACATCATGGATTTTGGCTGGGCTGCCTCAC
ATCTGGAACTTGGGAATTGGGATCCAACCTACTATTATAGACTCACGCTGCCGGCCATCTCAATTGAGCAAGGGTGTGGAGAATTTTGGCATGACTATATGGACTCCTTG
TGTCCTGGTGCAAGCACAAGCAGCAATAAGCCCAAAGGTCCATCTAAAAGGTATTTGCTTTCATTGTCTTTGGAGGAACGGATTAAGAAATTGCTGAGCGAGGGACCTCC
AATTCAAAGATTTAGTGCACTTAAGCATTATGCCCCTGATTATGAAGCAGATGAGTTTATCGAATCTCTTCAGCAGTATGCTCAGTCAGTACAGGGTCTCTGGGTTCCAA
AAAGTTCATTTCTACTTCCCCAAGATGGCAGTGGACGTTGTGCTAGGGATTTTGTTCTCTCTCTGTTTAGCAAGAATCCAGTGGTCAACTCTTCGCAGATAAATGTTCCG
AAGTCTCTTCGGGACAAAGTGAAACATTTTTTGAATTTGTTTGGTGTTGAAAGACCTGCATTTAAGGACTGGAAATTTAAGGAGAAAACAGATCGTTCATTTTTAAATAA
CTACCTGGATATTGTTCAGAAGCAAGAAAAGGTCTGGAGGTCTGTGGAAGAAGGGATCACTAATTCTTTCCGGGGATCTGTGAAAAGTGTGCCCCAAGCAAATGCTGCTA
CAGGAAAGCCTGAATTGGTTCCTAAACCTGAAAAACAAGTCAGTCATGACAAAGCTACAACCAAAAGCAGTAATGCAGCTCTTAACCGGAAAAGTACCATGTCGGATGAA
ACTCGAGAAGCTTTACCGAAAGCCCTTCAAAAGCTTTTTCAAAATCACAAGGTTTGCAGCTTTCAGTTGATATGTCAAGGTTTGCGTGATTTGGCCGTGTCCCAGTCTAC
TCTTCCAAAAGCTGATGCCAGAATGGTGGTGGCTGCTGCATATGGTGTTGATGCTCCTCCAGACGAATTAAAAAAGGTCATAAGCCAAGTTGCAACTGAGATTCATGGTC
TCTATGTCTTGACGTCATCTCCAGAGCATCCAGAATACGATCCATTAAGGAAAGTTGTCATTCAACTTTTTCTTGGACGTGGACCTAAAGCAGTGCTTAAAAGAGCTGAT
GTTTGGGAAGCTTCCCAACGTGAACTTGGGAGAGGTTTCAATAGCAATGAATATAGCAAGGTTATGAATGAGATTTGCGTGTCCCACGGTTCTTCTTGGGTCTTGAAGAG
TGGTGATGGAAATTCAAGATGA

mRNA sequence

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Protein sequence

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METGWKQRLDSGERTVLEGGNCERKMRTTKGNPNYMGQTFMGELSLIELVKPITCQLKEIQRVYIMDFGWAASHLELGNWDPTYYYRLTLPAISIEQGCGEFWHDYMDSL
CPGASTSSNKPKGPSKRYLLSLSLEERIKKLLSEGPPIQRFSALKHYAPDYEADEFIESLQQYAQSVQGLWVPKSSFLLPQDGSGRCARDFVLSLFSKNPVVNSSQINVP
KSLRDKVKHFLNLFGVERPAFKDWKFKEKTDRSFLNNYLDIVQKQEKVWRSVEEGITNSFRGSVKSVPQANAATGKPELVPKPEKQVSHDKATTKSSNAALNRKSTMSDE
TREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMVVAAAYGVDAPPDELKKVISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLFLGRGPKAVLKRAD
VWEASQRELGRGFNSNEYSKVMNEICVSHGSSWVLKSGDGNSR

Spg029825 (gene) of Sponge gourd (cylindrica) v1 genome