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Spg029848 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg029848
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCACTA en-spm transposon protein
Genome locationscaffold6:12053081..12054431
RNA-Seq ExpressionSpg029848
SyntenySpg029848
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038887408.1 poly [ADP-ribose] polymerase 1-like isoform X1 [Benincasa hispida]3.3e-4434.1Show/hide
Query:  MLGQSREHDASTVYREDVDPAVVGSSTEPSSARASGSNAL-------QGRRKRGHSRNIKIDRYVATHNRIPIHIDESVGKPTCKFATQFSGTIGTLTRD
        +L  S +   + +  +  D   +GSSTE  +  ASGS +        + RR RGHSRN+++DR+V  H RI I IDE VGKP C  AT+FS  IGT+ R+
Subjt:  MLGQSREHDASTVYREDVDPAVVGSSTEPSSARASGSNAL-------QGRRKRGHSRNIKIDRYVATHNRIPIHIDESVGKPTCKFATQFSGTIGTLTRD

Query:  TIPLHYKEWPETK-----------------------------------------WDVDLSKPHINKYVECRIMDTFREFRSEFHRHYKGFEDPKVARENP
        TIPL  K+W +                                           +D D+ K H+ KYV  R+ +TF+E+RS+ ++HY+ F+DPK AR  P
Subjt:  TIPLHYKEWPETK-----------------------------------------WDVDLSKPHINKYVECRIMDTFREFRSEFHRHYKGFEDPKVARENP

Query:  PKRITDQNDWNMLCDRWETPEWK-----------------------------------------------------------------LEMDGILKASSE
        PKRITD  DWN+LC+RWETPEWK                                                                 LEM  +++AS +
Subjt:  PKRITDQNDWNMLCDRWETPEWK-----------------------------------------------------------------LEMDGILKASSE

Query:  QGSEQISQPDVLKQVLGTRSGHIRGLGWDPNSGSSVSVSSSNPREKELE
        +    +S  +V KQVLG RSG+I+GLG +P   SS SV+S    +KELE
Subjt:  QGSEQISQPDVLKQVLGTRSGHIRGLGWDPNSGSSVSVSSSNPREKELE

XP_038887409.1 poly [ADP-ribose] polymerase 1-like isoform X2 [Benincasa hispida]2.4e-4736.96Show/hide
Query:  MLGQSREHDASTVYREDVDPAVVGSSTEPSSARASGSNAL-------QGRRKRGHSRNIKIDRYVATHNRIPIHIDESVGKPTCKFATQFSGTIGTLTRD
        +L  S +   + +  +  D   +GSSTE  +  ASGS +        + RR RGHSRN+++DR+V  H RI I IDE VGKP C  AT+FS  IGT+ R+
Subjt:  MLGQSREHDASTVYREDVDPAVVGSSTEPSSARASGSNAL-------QGRRKRGHSRNIKIDRYVATHNRIPIHIDESVGKPTCKFATQFSGTIGTLTRD

Query:  TIPLHYKEWPETK--------------WDVDLSKPHINKYVECRIMDTFREFRSEFHRHYKGFEDPKVARENPPKRITDQNDWNMLCDRWETPEWK----
        TIPL  K+W +                +D D+ K H+ KYV  R+ +TF+E+RS+ ++HY+ F+DPK AR  PPKRITD  DWN+LC+RWETPEWK    
Subjt:  TIPLHYKEWPETK--------------WDVDLSKPHINKYVECRIMDTFREFRSEFHRHYKGFEDPKVARENPPKRITDQNDWNMLCDRWETPEWK----

Query:  -------------------------------------------------------------LEMDGILKASSEQGSEQISQPDVLKQVLGTRSGHIRGLG
                                                                     LEM  +++AS ++    +S  +V KQVLG RSG+I+GLG
Subjt:  -------------------------------------------------------------LEMDGILKASSEQGSEQISQPDVLKQVLGTRSGHIRGLG

Query:  WDPNSGSSVSVSSSNPREKELE
         +P   SS SV+S    +KELE
Subjt:  WDPNSGSSVSVSSSNPREKELE

XP_038887410.1 poly [ADP-ribose] polymerase 1-like isoform X3 [Benincasa hispida]5.4e-3939.15Show/hide
Query:  MLGQSREHDASTVYREDVDPAVVGSSTEPSSARASGSNAL-------QGRRKRGHSRNIKIDRYVATHNRIPIHIDESVGKPTCKFATQFSGTIGTLTRD
        +L  S +   + +  +  D   +GSSTE  +  ASGS +        + RR RGHSRN+++DR+V  H RI I IDE VGKP C  AT+FS  IGT+ R+
Subjt:  MLGQSREHDASTVYREDVDPAVVGSSTEPSSARASGSNAL-------QGRRKRGHSRNIKIDRYVATHNRIPIHIDESVGKPTCKFATQFSGTIGTLTRD

Query:  TIPLHYKEWPETK-----------------------------------------WDVDLSKPHINKYVECRIMDTFREFRSEFHRHYKGFEDPKVARENP
        TIPL  K+W +                                           +D D+ K H+ KYV  R+ +TF+E+RS+ ++HY+ F+DPK AR  P
Subjt:  TIPLHYKEWPETK-----------------------------------------WDVDLSKPHINKYVECRIMDTFREFRSEFHRHYKGFEDPKVARENP

Query:  PKRITDQNDWNMLCDRWETPEWKLEMDGILKASSE
        PKRITD  DWN+LC+RWETPEWK + +   K+ S+
Subjt:  PKRITDQNDWNMLCDRWETPEWKLEMDGILKASSE

XP_038887411.1 poly [ADP-ribose] polymerase 1-like isoform X4 [Benincasa hispida]5.4e-3939.15Show/hide
Query:  MLGQSREHDASTVYREDVDPAVVGSSTEPSSARASGSNAL-------QGRRKRGHSRNIKIDRYVATHNRIPIHIDESVGKPTCKFATQFSGTIGTLTRD
        +L  S +   + +  +  D   +GSSTE  +  ASGS +        + RR RGHSRN+++DR+V  H RI I IDE VGKP C  AT+FS  IGT+ R+
Subjt:  MLGQSREHDASTVYREDVDPAVVGSSTEPSSARASGSNAL-------QGRRKRGHSRNIKIDRYVATHNRIPIHIDESVGKPTCKFATQFSGTIGTLTRD

Query:  TIPLHYKEWPETK-----------------------------------------WDVDLSKPHINKYVECRIMDTFREFRSEFHRHYKGFEDPKVARENP
        TIPL  K+W +                                           +D D+ K H+ KYV  R+ +TF+E+RS+ ++HY+ F+DPK AR  P
Subjt:  TIPLHYKEWPETK-----------------------------------------WDVDLSKPHINKYVECRIMDTFREFRSEFHRHYKGFEDPKVARENP

Query:  PKRITDQNDWNMLCDRWETPEWKLEMDGILKASSE
        PKRITD  DWN+LC+RWETPEWK + +   K+ S+
Subjt:  PKRITDQNDWNMLCDRWETPEWKLEMDGILKASSE

XP_038887413.1 uncharacterized protein LOC120077557 isoform X5 [Benincasa hispida]3.3e-4434.1Show/hide
Query:  MLGQSREHDASTVYREDVDPAVVGSSTEPSSARASGSNAL-------QGRRKRGHSRNIKIDRYVATHNRIPIHIDESVGKPTCKFATQFSGTIGTLTRD
        +L  S +   + +  +  D   +GSSTE  +  ASGS +        + RR RGHSRN+++DR+V  H RI I IDE VGKP C  AT+FS  IGT+ R+
Subjt:  MLGQSREHDASTVYREDVDPAVVGSSTEPSSARASGSNAL-------QGRRKRGHSRNIKIDRYVATHNRIPIHIDESVGKPTCKFATQFSGTIGTLTRD

Query:  TIPLHYKEWPETK-----------------------------------------WDVDLSKPHINKYVECRIMDTFREFRSEFHRHYKGFEDPKVARENP
        TIPL  K+W +                                           +D D+ K H+ KYV  R+ +TF+E+RS+ ++HY+ F+DPK AR  P
Subjt:  TIPLHYKEWPETK-----------------------------------------WDVDLSKPHINKYVECRIMDTFREFRSEFHRHYKGFEDPKVARENP

Query:  PKRITDQNDWNMLCDRWETPEWK-----------------------------------------------------------------LEMDGILKASSE
        PKRITD  DWN+LC+RWETPEWK                                                                 LEM  +++AS +
Subjt:  PKRITDQNDWNMLCDRWETPEWK-----------------------------------------------------------------LEMDGILKASSE

Query:  QGSEQISQPDVLKQVLGTRSGHIRGLGWDPNSGSSVSVSSSNPREKELE
        +    +S  +V KQVLG RSG+I+GLG +P   SS SV+S    +KELE
Subjt:  QGSEQISQPDVLKQVLGTRSGHIRGLGWDPNSGSSVSVSSSNPREKELE

TrEMBL top hitse value%identityAlignment
A0A5A7TFG0 Transposon protein, putative, CACTA, En/Spm sub-class9.4e-2935.16Show/hide
Query:  STEPSSARASG-SNALQGRRKRGHSRNIKIDRYVATHNRIPIHIDESVGKPTCKFATQFSGTIGTLTRDTIPLHYKEWP--------------ETKWDVD
        S +PS+   S      +GR  RG+ RNI++D++V  H +I I I+E  GKP   FA + +  IGT  R+TIPL  + W               ET ++ D
Subjt:  STEPSSARASG-SNALQGRRKRGHSRNIKIDRYVATHNRIPIHIDESVGKPTCKFATQFSGTIGTLTRDTIPLHYKEWP--------------ETKWDVD

Query:  LSKPHINKYVECRIMDTFREFRSEFHRHYKGFEDPKVARENPPKRITDQNDWNMLCDRWETPEWK--------------------------------LEM
         +   + KY+E ++ + FREFR++ H++Y  F+D   AR NPP RIT   DWNM+CDRWET  WK                                LEM
Subjt:  LSKPHINKYVECRIMDTFREFRSEFHRHYKGFEDPKVARENPPKRITDQNDWNMLCDRWETPEWK--------------------------------LEM

Query:  DGILKASSEQGSEQISQPDVLKQVLGTRSGHIRGLGWDPNSGSSVSVSSSNPREKE
          I+  S+E G + IS     + VLG+RS        +P SG S+  + S+ REKE
Subjt:  DGILKASSEQGSEQISQPDVLKQVLGTRSGHIRGLGWDPNSGSSVSVSSSNPREKE

A0A5A7TRX4 DUF4216 domain-containing protein3.7e-2531.41Show/hide
Query:  SNALQGRRKRGHSRNIKIDRYVATHNRIPIHIDESVGKPTCKFATQFSGTIGTLTRDTIPLHYK--------------EWPETKWDVDLSKPHINKYVEC
        S+   GR  RG+ RNI++D++V  H +I I I+E  GKP   FA + +  IGT  R+TIPL  +              +W ET ++ D +   + KY+E 
Subjt:  SNALQGRRKRGHSRNIKIDRYVATHNRIPIHIDESVGKPTCKFATQFSGTIGTLTRDTIPLHYK--------------EWPETKWDVDLSKPHINKYVEC

Query:  RIMDTFREFRSEFHRHYKGFEDPKVARENPPKRITDQNDWNMLCDRWETPEWK-----------------------------------------------
        ++ +TFREFR++ H++Y  F+D   AR NP  RIT + DWNM+CDRWET  WK                                               
Subjt:  RIMDTFREFRSEFHRHYKGFEDPKVARENPPKRITDQNDWNMLCDRWETPEWK-----------------------------------------------

Query:  ------------------LEMDGILKASSEQGSEQISQPDVLKQVLGTRSGHIRGLGWDPNSGSSVSVSSSNPREKE
                          LEM  I++ S+E G + IS     + VLG+RS        +P SG S+  + S+ REKE
Subjt:  ------------------LEMDGILKASSEQGSEQISQPDVLKQVLGTRSGHIRGLGWDPNSGSSVSVSSSNPREKE

A0A5A7US78 Uncharacterized protein9.4e-2934.88Show/hide
Query:  STEPSSARASG-SNALQGRRKRGHSRNIKIDRYVATHNRIPIHIDESVGKPTCKFATQFSGTIGTLTRDTIPLHYK--------------EWPETKWDVD
        S +PS+   S      +GR  RG+ RNI++D++V  H +I I I+E  GKP   F  + +  IGT  R+TIPL  +              +W ET ++ D
Subjt:  STEPSSARASG-SNALQGRRKRGHSRNIKIDRYVATHNRIPIHIDESVGKPTCKFATQFSGTIGTLTRDTIPLHYK--------------EWPETKWDVD

Query:  LSKPHINKYVECRIMDTFREFRSEFHRHYKGFEDPKVARENPPKRITDQNDWNMLCDRWETPEWK----------------------------------L
         +   + KY+E ++ +TFREFR+  H++Y  F+D   AR NPP RIT + DWNM+CDRWET  WK                                  L
Subjt:  LSKPHINKYVECRIMDTFREFRSEFHRHYKGFEDPKVARENPPKRITDQNDWNMLCDRWETPEWK----------------------------------L

Query:  EMDGILKASSEQGSEQISQPDVLKQVLGTRSGHIRGLGWDPNSGSSVSVSSSNPREKE
        EM  I+  S+E G + IS     K VLG+RS        +P SG S+  + S+ REK+
Subjt:  EMDGILKASSEQGSEQISQPDVLKQVLGTRSGHIRGLGWDPNSGSSVSVSSSNPREKE

A0A5A7VJC8 CACTA en-spm transposon protein8.2e-2531.3Show/hide
Query:  YREDVDPAVVG--SSTEPSSARASGSNALQGRRKRGHSRNIKIDRYVATHNRIPIHIDESVGKPTCKFATQFSGTIGTLTRDTIPLHYKEWPETKWD---
        + +D+D  + G  SS   ++A +S        R+R  SR +K++R+VA + RIP+ I     KP      +FS  IG   R T P+H  +W +   +   
Subjt:  YREDVDPAVVG--SSTEPSSARASGSNALQGRRKRGHSRNIKIDRYVATHNRIPIHIDESVGKPTCKFATQFSGTIGTLTRDTIPLHYKEWPETKWD---

Query:  ----VDLSKPHINKYVECRIMDTFREFRSEFHRHYKGFEDPKVARENPPKRITDQNDWNMLCDRWETPEWKLEM--------------------DGILKA
            +D +   +N++VE +++ TF+EFR++ HRH+K + DP+VAR NPP      N    L +R E P  ++++                    + +L+ 
Subjt:  ----VDLSKPHINKYVECRIMDTFREFRSEFHRHYKGFEDPKVARENPPKRITDQNDWNMLCDRWETPEWKLEM--------------------DGILKA

Query:  SSE---QGSEQISQPDVLKQVLGTRSGHIRGLGWDPN-------SGSSVSVSSSNPREKELE
         S+   +GS+ +S+ ++  QVLG R G+ +GLGW P        S SS S S S   EKE+E
Subjt:  SSE---QGSEQISQPDVLKQVLGTRSGHIRGLGWDPN-------SGSSVSVSSSNPREKELE

A0A5D3DCW2 CACTA en-spm transposon protein2.2e-2533.05Show/hide
Query:  YREDVDPAVVGSST-EPSSARASGSNALQGRRKRGHSRNIKIDRYVATHNRIPIHIDESVGKPTCKFATQFSGTIGTLTRDTIPLHYKEWPETKWD-VDL
        + +D+D    GSS+   ++AR+S   A    R+R  SR ++++R+VA + RI + I     KP      +FS  IG   R+T P+   +W +   + +++
Subjt:  YREDVDPAVVGSST-EPSSARASGSNALQGRRKRGHSRNIKIDRYVATHNRIPIHIDESVGKPTCKFATQFSGTIGTLTRDTIPLHYKEWPETKWD-VDL

Query:  SKPHINKYVECRIMDTFREFRSEFHRHYKGFEDPKVARENPPKRITDQN-DWNMLCDRWETPEWKLEMDGILKASSEQGSEQISQPDVLKQVLGTRSGHI
         K  + ++V+  ++ TF+EF ++ HRH+K + DP+ AR NPP  +  ++ DW+ LCD + +  ++ +M  +    + +GS+ +S+ ++  QVLG R G+ 
Subjt:  SKPHINKYVECRIMDTFREFRSEFHRHYKGFEDPKVARENPPKRITDQN-DWNMLCDRWETPEWKLEMDGILKASSEQGSEQISQPDVLKQVLGTRSGHI

Query:  RGLGWDPN-------SGSSVSVSSSNPREKELE
        +GLGW P        S SS S S S P EKE+E
Subjt:  RGLGWDPN-------SGSSVSVSSSNPREKELE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGGTCAAAGTCGAGAGCACGATGCATCGACAGTGTATAGAGAGGATGTGGATCCCGCAGTGGTTGGTTCCTCGACTGAGCCTTCATCTGCTCGAGCTTCAGGATC
TAACGCATTGCAAGGAAGACGAAAGAGAGGGCATAGTCGAAACATCAAAATTGATCGGTATGTGGCTACACACAATAGGATACCCATTCACATTGATGAGTCCGTCGGCA
AACCAACGTGTAAGTTTGCTACACAATTCAGTGGGACGATTGGTACCCTCACACGAGATACAATTCCGTTGCATTACAAGGAGTGGCCTGAGACGAAATGGGATGTGGAT
TTGTCGAAGCCGCATATTAACAAGTATGTGGAATGTAGAATAATGGACACGTTTAGGGAGTTTAGGAGCGAGTTTCATAGGCACTACAAGGGATTCGAGGACCCTAAAGT
TGCTCGAGAAAATCCACCAAAAAGGATTACCGACCAAAACGATTGGAATATGCTATGCGACAGATGGGAGACTCCCGAATGGAAATTGGAAATGGATGGGATACTGAAAG
CATCGTCAGAACAAGGGTCCGAACAGATCTCGCAACCTGATGTTCTGAAACAGGTTTTGGGAACTCGATCAGGCCACATCAGAGGTCTTGGTTGGGATCCAAACTCTGGC
TCATCTGTCAGTGTCTCGTCTTCAAACCCTCGTGAAAAAGAGCTAGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGGGTCAAAGTCGAGAGCACGATGCATCGACAGTGTATAGAGAGGATGTGGATCCCGCAGTGGTTGGTTCCTCGACTGAGCCTTCATCTGCTCGAGCTTCAGGATC
TAACGCATTGCAAGGAAGACGAAAGAGAGGGCATAGTCGAAACATCAAAATTGATCGGTATGTGGCTACACACAATAGGATACCCATTCACATTGATGAGTCCGTCGGCA
AACCAACGTGTAAGTTTGCTACACAATTCAGTGGGACGATTGGTACCCTCACACGAGATACAATTCCGTTGCATTACAAGGAGTGGCCTGAGACGAAATGGGATGTGGAT
TTGTCGAAGCCGCATATTAACAAGTATGTGGAATGTAGAATAATGGACACGTTTAGGGAGTTTAGGAGCGAGTTTCATAGGCACTACAAGGGATTCGAGGACCCTAAAGT
TGCTCGAGAAAATCCACCAAAAAGGATTACCGACCAAAACGATTGGAATATGCTATGCGACAGATGGGAGACTCCCGAATGGAAATTGGAAATGGATGGGATACTGAAAG
CATCGTCAGAACAAGGGTCCGAACAGATCTCGCAACCTGATGTTCTGAAACAGGTTTTGGGAACTCGATCAGGCCACATCAGAGGTCTTGGTTGGGATCCAAACTCTGGC
TCATCTGTCAGTGTCTCGTCTTCAAACCCTCGTGAAAAAGAGCTAGAGTAG
Protein sequenceShow/hide protein sequence
MLGQSREHDASTVYREDVDPAVVGSSTEPSSARASGSNALQGRRKRGHSRNIKIDRYVATHNRIPIHIDESVGKPTCKFATQFSGTIGTLTRDTIPLHYKEWPETKWDVD
LSKPHINKYVECRIMDTFREFRSEFHRHYKGFEDPKVARENPPKRITDQNDWNMLCDRWETPEWKLEMDGILKASSEQGSEQISQPDVLKQVLGTRSGHIRGLGWDPNSG
SSVSVSSSNPREKELE