; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg030025 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030025
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionF-box protein
Genome locationscaffold6:9232289..9232738
RNA-Seq ExpressionSpg030025
SyntenySpg030025
Gene Ontology termsNA
InterPro domainsIPR044809 - F-box protein AUF1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585288.1 F-box protein, partial [Cucurbita argyrosperma subsp. sororia]3.9e-3575.23Show/hide
Query:  STSPFQSFLFGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSCVILIFRGIR-DLDDRAAMAE
        S S   SFL+GFFKSVVKSFFDLISPILVQSESQNSPAQILRQF  I RL+IEFPTGD KV+R+GGVKWRAEF IT+RSCVIL+FRGIR +  D  A+A+
Subjt:  STSPFQSFLFGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSCVILIFRGIR-DLDDRAAMAE

Query:  DFNFIGGLK
         F+FI  LK
Subjt:  DFNFIGGLK

XP_022951596.1 F-box protein At1g22220-like [Cucurbita moschata]3.9e-3575.23Show/hide
Query:  STSPFQSFLFGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSCVILIFRGIR-DLDDRAAMAE
        S S   SFL+GFFKSVVKSFFDLISPILVQSESQNSPAQILRQF  I RL+IEFPTGD KV+R+GGVKWRAEF IT+RSCVIL+FRGIR +  D  A+A+
Subjt:  STSPFQSFLFGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSCVILIFRGIR-DLDDRAAMAE

Query:  DFNFIGGLK
         F+FI  LK
Subjt:  DFNFIGGLK

XP_023002829.1 F-box protein At1g78100-like [Cucurbita maxima]3.9e-3575.23Show/hide
Query:  STSPFQSFLFGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSCVILIFRGIR-DLDDRAAMAE
        S S   SFL+GFFKSVVKSFFDLISPILVQSESQNSPAQILRQF  I RL+IEFPTGD KV+R+GGVKWRAEF IT+RSCVIL+FRGIR +  D  A+A+
Subjt:  STSPFQSFLFGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSCVILIFRGIR-DLDDRAAMAE

Query:  DFNFIGGLK
         F+FI  LK
Subjt:  DFNFIGGLK

XP_023537288.1 F-box protein At1g22220-like [Cucurbita pepo subsp. pepo]3.9e-3575.23Show/hide
Query:  STSPFQSFLFGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSCVILIFRGIR-DLDDRAAMAE
        S S   SFL+GFFKSVVKSFFDLISPILVQSESQNSPAQILRQF  I RL+IEFPTGD KV+R+GGVKWRAEF IT+RSCVIL+FRGIR +  D  A+A+
Subjt:  STSPFQSFLFGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSCVILIFRGIR-DLDDRAAMAE

Query:  DFNFIGGLK
         F+FI  LK
Subjt:  DFNFIGGLK

XP_038886087.1 F-box protein At1g22220 [Benincasa hispida]2.1e-2869.44Show/hide
Query:  STSPFQSFLFGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSCVILIFRGIRDLDDRAAMAED
        S S   SFL  FFKSVVKSFF LIS +LVQSESQNSPAQILRQF  I RL+IEFPTGD KV+RV  VKW+AEF   ++SCVILIFRGIR  +  A    D
Subjt:  STSPFQSFLFGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSCVILIFRGIRDLDDRAAMAED

Query:  FNFIGGLK
        F+FIGGLK
Subjt:  FNFIGGLK

TrEMBL top hitse value%identityAlignment
A0A0A0LN04 F-box domain-containing protein3.0e-2564.29Show/hide
Query:  STSPFQSFLFGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSCVILIFRGIR----DLDDRAA
        S S   SFL  FFKSV+KSF DL+SPIL+QSESQNSPAQILRQF  I  L+IEFPT D KV+RV  VKWRAEF   ++SCVILIFR IR    + DD   
Subjt:  STSPFQSFLFGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSCVILIFRGIR----DLDDRAA

Query:  MAEDFNFIGGLK
        +  D +FIGGLK
Subjt:  MAEDFNFIGGLK

A0A1S3BC00 F-box protein At1g222208.0e-2664.6Show/hide
Query:  STSPFQSFLFGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSCVILIFRGIRDLDDRAAMAED
        S S   SFL  FFKSVVKSF DL+SPILVQSE+QNSPAQILRQF  I  L+IEFPT D KV+RV  VKWRAEF   ++SCVILIFR IR    + A+ ED
Subjt:  STSPFQSFLFGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSCVILIFRGIRDLDDRAAMAED

Query:  -----FNFIGGLK
              +FIGGLK
Subjt:  -----FNFIGGLK

A0A5A7VGI7 F-box protein8.0e-2664.6Show/hide
Query:  STSPFQSFLFGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSCVILIFRGIRDLDDRAAMAED
        S S   SFL  FFKSVVKSF DL+SPILVQSE+QNSPAQILRQF  I  L+IEFPT D KV+RV  VKWRAEF   ++SCVILIFR IR    + A+ ED
Subjt:  STSPFQSFLFGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSCVILIFRGIRDLDDRAAMAED

Query:  -----FNFIGGLK
              +FIGGLK
Subjt:  -----FNFIGGLK

A0A6J1GI01 F-box protein At1g22220-like1.9e-3575.23Show/hide
Query:  STSPFQSFLFGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSCVILIFRGIR-DLDDRAAMAE
        S S   SFL+GFFKSVVKSFFDLISPILVQSESQNSPAQILRQF  I RL+IEFPTGD KV+R+GGVKWRAEF IT+RSCVIL+FRGIR +  D  A+A+
Subjt:  STSPFQSFLFGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSCVILIFRGIR-DLDDRAAMAE

Query:  DFNFIGGLK
         F+FI  LK
Subjt:  DFNFIGGLK

A0A6J1KRK0 F-box protein At1g78100-like1.9e-3575.23Show/hide
Query:  STSPFQSFLFGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSCVILIFRGIR-DLDDRAAMAE
        S S   SFL+GFFKSVVKSFFDLISPILVQSESQNSPAQILRQF  I RL+IEFPTGD KV+R+GGVKWRAEF IT+RSCVIL+FRGIR +  D  A+A+
Subjt:  STSPFQSFLFGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSCVILIFRGIR-DLDDRAAMAE

Query:  DFNFIGGLK
         F+FI  LK
Subjt:  DFNFIGGLK

SwissProt top hitse value%identityAlignment
O49508 F-box protein At4g183801.4e-0633.7Show/hide
Query:  SQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSCVIL----------------IFRGIRDLDDRAAMAEDFNFIGGLK
        + +SP Q+L+ F  I  LKIE P+G+  +D    +KWRAEF  T+ +CVIL                    +  ++D  ++ E F   GGLK
Subjt:  SQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSCVIL----------------IFRGIRDLDDRAAMAEDFNFIGGLK

Q9C534 F-box protein At1g302007.5e-0537.86Show/hide
Query:  SFSIIFVSNLLDFYPSTSPFQSF--LFGFFKSVVKSFFDLISPILVQSE---SQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSC
        SFS +F    L F P   PFQ    + G  +S   S FD  S   +  E   + +SP Q+L+ F  I  LKIE PTG+  ++    +KWRA+F  T+ +C
Subjt:  SFSIIFVSNLLDFYPSTSPFQSF--LFGFFKSVVKSFFDLISPILVQSE---SQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSC

Query:  VIL
        +IL
Subjt:  VIL

Q9C9S2 F-box protein AUF15.4e-1132.85Show/hide
Query:  IIFVSNLLDFYPSTSPFQSFLFGFFKSVVKSFFDLISPIL--------VQSESQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSC
        ++ +  +L    S S   S +  FF+S+ KS   L+ PI         + + S  +PAQIL  F  I  L++E   GD K+++   VKW+AEF  T++SC
Subjt:  IIFVSNLLDFYPSTSPFQSFLFGFFKSVVKSFFDLISPIL--------VQSESQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSC

Query:  VILIFRGIRDLDDRAAMA---------EDFNFIGGLK
        VI+ FR        A  A          D  F+ GLK
Subjt:  VILIFRGIRDLDDRAAMA---------EDFNFIGGLK

Q9FNK5 F-box protein At5g461708.9e-0645.1Show/hide
Query:  SQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSCVIL
        + +SP Q+L+ F  I  L+IE P+G+  +D    +KWRAEF  T+ +CVIL
Subjt:  SQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSCVIL

Q9LM18 F-box protein AUF24.1e-1135.34Show/hide
Query:  LDFYPSTSPFQSFLF-GFFKSVVKSFFDLISPILVQSESQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSCVILIFRGIRDLDDR
        LD   S SP  + +F   F  +V        PI + + S + P +IL +F  I  L +E P GD K+++   VKW+AEF  T++SCVI+ FR    +   
Subjt:  LDFYPSTSPFQSFLF-GFFKSVVKSFFDLISPILVQSESQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSCVILIFRGIRDLDDR

Query:  AAM--AEDFNFIGGLK
         A+    D  F+ GLK
Subjt:  AAM--AEDFNFIGGLK

Arabidopsis top hitse value%identityAlignment
AT1G22220.1 F-box family protein2.9e-1235.34Show/hide
Query:  LDFYPSTSPFQSFLF-GFFKSVVKSFFDLISPILVQSESQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSCVILIFRGIRDLDDR
        LD   S SP  + +F   F  +V        PI + + S + P +IL +F  I  L +E P GD K+++   VKW+AEF  T++SCVI+ FR    +   
Subjt:  LDFYPSTSPFQSFLF-GFFKSVVKSFFDLISPILVQSESQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSCVILIFRGIRDLDDR

Query:  AAM--AEDFNFIGGLK
         A+    D  F+ GLK
Subjt:  AAM--AEDFNFIGGLK

AT1G78100.1 F-box family protein3.8e-1232.85Show/hide
Query:  IIFVSNLLDFYPSTSPFQSFLFGFFKSVVKSFFDLISPIL--------VQSESQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSC
        ++ +  +L    S S   S +  FF+S+ KS   L+ PI         + + S  +PAQIL  F  I  L++E   GD K+++   VKW+AEF  T++SC
Subjt:  IIFVSNLLDFYPSTSPFQSFLFGFFKSVVKSFFDLISPIL--------VQSESQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSC

Query:  VILIFRGIRDLDDRAAMA---------EDFNFIGGLK
        VI+ FR        A  A          D  F+ GLK
Subjt:  VILIFRGIRDLDDRAAMA---------EDFNFIGGLK

AT4G18380.1 F-box family protein9.7e-0833.7Show/hide
Query:  SQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSCVIL----------------IFRGIRDLDDRAAMAEDFNFIGGLK
        + +SP Q+L+ F  I  LKIE P+G+  +D    +KWRAEF  T+ +CVIL                    +  ++D  ++ E F   GGLK
Subjt:  SQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSCVIL----------------IFRGIRDLDDRAAMAEDFNFIGGLK

AT4G18380.2 F-box family protein9.7e-0833.7Show/hide
Query:  SQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSCVIL----------------IFRGIRDLDDRAAMAEDFNFIGGLK
        + +SP Q+L+ F  I  LKIE P+G+  +D    +KWRAEF  T+ +CVIL                    +  ++D  ++ E F   GGLK
Subjt:  SQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSCVIL----------------IFRGIRDLDDRAAMAEDFNFIGGLK

AT5G46170.1 F-box family protein6.3e-0745.1Show/hide
Query:  SQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSCVIL
        + +SP Q+L+ F  I  L+IE P+G+  +D    +KWRAEF  T+ +CVIL
Subjt:  SQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWRAEFEITMRSCVIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACGCGCATTTACTAAAATACCCATCCTCTCAAACCCTGAACCCTATCTTCCATTTTCTATCAACGAAATTTCATTTTCTATCATCTTCGTTTCAAATTTGCTTGA
TTTCTATCCGTCTACATCTCCATTTCAATCCTTCCTCTTTGGCTTCTTCAAATCCGTTGTCAAGTCGTTCTTCGATTTGATTTCCCCTATTCTCGTACAATCCGAGTCTC
AGAACTCTCCGGCGCAAATCCTACGCCAGTTCGCTTGGATCCACCGCCTCAAGATCGAGTTTCCAACGGGCGATCCCAAAGTCGACAGAGTCGGGGGCGTTAAATGGAGA
GCGGAGTTTGAGATTACGATGAGGAGCTGCGTGATTTTGATTTTTCGGGGGATTAGGGATTTGGATGATCGGGCGGCGATGGCGGAGGATTTCAATTTCATCGGAGGGCT
GAAATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAACGCGCATTTACTAAAATACCCATCCTCTCAAACCCTGAACCCTATCTTCCATTTTCTATCAACGAAATTTCATTTTCTATCATCTTCGTTTCAAATTTGCTTGA
TTTCTATCCGTCTACATCTCCATTTCAATCCTTCCTCTTTGGCTTCTTCAAATCCGTTGTCAAGTCGTTCTTCGATTTGATTTCCCCTATTCTCGTACAATCCGAGTCTC
AGAACTCTCCGGCGCAAATCCTACGCCAGTTCGCTTGGATCCACCGCCTCAAGATCGAGTTTCCAACGGGCGATCCCAAAGTCGACAGAGTCGGGGGCGTTAAATGGAGA
GCGGAGTTTGAGATTACGATGAGGAGCTGCGTGATTTTGATTTTTCGGGGGATTAGGGATTTGGATGATCGGGCGGCGATGGCGGAGGATTTCAATTTCATCGGAGGGCT
GAAATTTTGA
Protein sequenceShow/hide protein sequence
MKRAFTKIPILSNPEPYLPFSINEISFSIIFVSNLLDFYPSTSPFQSFLFGFFKSVVKSFFDLISPILVQSESQNSPAQILRQFAWIHRLKIEFPTGDPKVDRVGGVKWR
AEFEITMRSCVILIFRGIRDLDDRAAMAEDFNFIGGLKF