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Spg030033 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030033
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionzinc-finger homeodomain protein 6-like
Genome locationscaffold6:9251096..9254505
RNA-Seq ExpressionSpg030033
SyntenySpg030033
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR006456 - ZF-HD homeobox protein, Cys/His-rich dimerisation domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577219.1 Zinc-finger homeodomain protein 6, partial [Cucurbita argyrosperma subsp. sororia]2.3e-3169.52Show/hide
Query:  HLPFQYSLRPRRDHVPLNPDPVPATATPPVAATAPSSPVRYRECLKNHAAKSGGHVLDGCGEFMPCGEDGTPDCFKCAACECHRSFHRRELEADIANARL
        H    YSLRPRRDH P NPDP    A PP    APSSPVRYRECL+N+A KSGGHVLDGCGEFMP GEDGTPD FKCAACECHRSFHRR +E  + N R+
Subjt:  HLPFQYSLRPRRDHVPLNPDPVPATATPPVAATAPSSPVRYRECLKNHAAKSGGHVLDGCGEFMPCGEDGTPDCFKCAACECHRSFHRRELEADIANARL

Query:  QRINY
        + ++Y
Subjt:  QRINY

XP_022929279.1 zinc-finger homeodomain protein 6-like [Cucurbita moschata]2.3e-3169.52Show/hide
Query:  HLPFQYSLRPRRDHVPLNPDPVPATATPPVAATAPSSPVRYRECLKNHAAKSGGHVLDGCGEFMPCGEDGTPDCFKCAACECHRSFHRRELEADIANARL
        H    YSLRPRRDH P NPDP    A PP    APSSPVRYRECL+N+A KSGGHVLDGCGEFMP GEDGTPD FKCAACECHRSFHRR +E  + N R+
Subjt:  HLPFQYSLRPRRDHVPLNPDPVPATATPPVAATAPSSPVRYRECLKNHAAKSGGHVLDGCGEFMPCGEDGTPDCFKCAACECHRSFHRRELEADIANARL

Query:  QRINY
        + ++Y
Subjt:  QRINY

XP_022985130.1 zinc-finger homeodomain protein 6-like [Cucurbita maxima]2.7e-3269.81Show/hide
Query:  HLPFQYSLRPRRDHVPLNPDPVPATATPPVAATAPSSPVRYRECLKNHAAKSGGHVLDGCGEFMPCGEDGTPDCFKCAACECHRSFHRRELE-ADIANAR
        H    YSLRPRRDH P NPDP    A PP    APSSPVRYRECL+N+A KSGGHVLDGCGEFMP G+DGTPD FKCAACECHRSFHRR +E  D+AN R
Subjt:  HLPFQYSLRPRRDHVPLNPDPVPATATPPVAATAPSSPVRYRECLKNHAAKSGGHVLDGCGEFMPCGEDGTPDCFKCAACECHRSFHRRELE-ADIANAR

Query:  LQRINY
        ++ ++Y
Subjt:  LQRINY

XP_023552881.1 zinc-finger homeodomain protein 6-like [Cucurbita pepo subsp. pepo]2.5e-3068.57Show/hide
Query:  HLPFQYSLRPRRDHVPLNPDPVPATATPPVAATAPSSPVRYRECLKNHAAKSGGHVLDGCGEFMPCGEDGTPDCFKCAACECHRSFHRRELEADIANARL
        H    YSLRPRRDH P NPDP    A PP    APSSPVRYRECL+N+A KSGGHVLDGCGEFMP GEDGT D FKCAACECHRSFHRR +E  + N R+
Subjt:  HLPFQYSLRPRRDHVPLNPDPVPATATPPVAATAPSSPVRYRECLKNHAAKSGGHVLDGCGEFMPCGEDGTPDCFKCAACECHRSFHRRELEADIANARL

Query:  QRINY
        + ++Y
Subjt:  QRINY

XP_038907118.1 zinc-finger homeodomain protein 10-like [Benincasa hispida]2.9e-3460.74Show/hide
Query:  MELRDPQQTTHHQTFAHGTSSSAQTLDQTHLPFQYSLRPRRDHVPLNPDPVPATATPPVAATAPSSPVRYRECLKNHAAKSGGHVLDGCGEFMPCGEDGT
        M+L++ QQTT              +    HLPFQYSLRP  DH PLNPDP         AA +PSSPV YR+CLKNHA K+GGHVLDGCGEFMP GE+GT
Subjt:  MELRDPQQTTHHQTFAHGTSSSAQTLDQTHLPFQYSLRPRRDHVPLNPDPVPATATPPVAATAPSSPVRYRECLKNHAAKSGGHVLDGCGEFMPCGEDGT

Query:  PDCFKCAACECHRSFHRREL-EADIANARLQRINY
        PD FKCAACECHRSFHRR L E DI N RL  + Y
Subjt:  PDCFKCAACECHRSFHRREL-EADIANARLQRINY

TrEMBL top hitse value%identityAlignment
A0A0A0KWP2 ZF-HD dimerization-type domain-containing protein1.8e-2970.41Show/hide
Query:  HLPFQYSLRPRRDHVPLNPDPVPATATPPVAATAPSSPVRYRECLKNHAAKSGGHVLDGCGEFMPCGEDGTPDCFKCAACECHRSFHRREL-EADIAN
        HLPFQYSLRPR D  P  P P P     P  A+  S+P+RY +CLKNHA K+GGHVLDGCGEFMP GEDGTPD FKCAACECHRSFHRR L E DI N
Subjt:  HLPFQYSLRPRRDHVPLNPDPVPATATPPVAATAPSSPVRYRECLKNHAAKSGGHVLDGCGEFMPCGEDGTPDCFKCAACECHRSFHRREL-EADIAN

A0A1S3BSZ9 zinc-finger homeodomain protein 6-like1.0e-2965.74Show/hide
Query:  HLPFQYSL-RPRRD---HVPLNPDPVPATATPPVAATAPSSPVRYRECLKNHAAKSGGHVLDGCGEFMPCGEDGTPDCFKCAACECHRSFHRRELEADIA
        HLPFQYSL RPR D     PLNPDP P        A+ PS+PVRY +CLKNHA K+GGHVLDGCGEFMP GEDGTPD FKCAACECHRSFHRR LE +  
Subjt:  HLPFQYSL-RPRRD---HVPLNPDPVPATATPPVAATAPSSPVRYRECLKNHAAKSGGHVLDGCGEFMPCGEDGTPDCFKCAACECHRSFHRRELEADIA

Query:  NARLQRIN
             R++
Subjt:  NARLQRIN

A0A5A7TTS2 Zinc-finger homeodomain protein 6-like1.3e-2965.14Show/hide
Query:  HLPFQYSL-RPRRD----HVPLNPDPVPATATPPVAATAPSSPVRYRECLKNHAAKSGGHVLDGCGEFMPCGEDGTPDCFKCAACECHRSFHRRELEADI
        HLPFQYSL RPR D      PLNPDP P        A+ PS+PVRY +CLKNHA K+GGHVLDGCGEFMP GEDGTPD FKCAACECHRSFHRR LE + 
Subjt:  HLPFQYSL-RPRRD----HVPLNPDPVPATATPPVAATAPSSPVRYRECLKNHAAKSGGHVLDGCGEFMPCGEDGTPDCFKCAACECHRSFHRRELEADI

Query:  ANARLQRIN
              R++
Subjt:  ANARLQRIN

A0A6J1ENA6 zinc-finger homeodomain protein 6-like1.1e-3169.52Show/hide
Query:  HLPFQYSLRPRRDHVPLNPDPVPATATPPVAATAPSSPVRYRECLKNHAAKSGGHVLDGCGEFMPCGEDGTPDCFKCAACECHRSFHRRELEADIANARL
        H    YSLRPRRDH P NPDP    A PP    APSSPVRYRECL+N+A KSGGHVLDGCGEFMP GEDGTPD FKCAACECHRSFHRR +E  + N R+
Subjt:  HLPFQYSLRPRRDHVPLNPDPVPATATPPVAATAPSSPVRYRECLKNHAAKSGGHVLDGCGEFMPCGEDGTPDCFKCAACECHRSFHRRELEADIANARL

Query:  QRINY
        + ++Y
Subjt:  QRINY

A0A6J1JAI0 zinc-finger homeodomain protein 6-like1.3e-3269.81Show/hide
Query:  HLPFQYSLRPRRDHVPLNPDPVPATATPPVAATAPSSPVRYRECLKNHAAKSGGHVLDGCGEFMPCGEDGTPDCFKCAACECHRSFHRRELE-ADIANAR
        H    YSLRPRRDH P NPDP    A PP    APSSPVRYRECL+N+A KSGGHVLDGCGEFMP G+DGTPD FKCAACECHRSFHRR +E  D+AN R
Subjt:  HLPFQYSLRPRRDHVPLNPDPVPATATPPVAATAPSSPVRYRECLKNHAAKSGGHVLDGCGEFMPCGEDGTPDCFKCAACECHRSFHRRELE-ADIANAR

Query:  LQRINY
        ++ ++Y
Subjt:  LQRINY

SwissProt top hitse value%identityAlignment
A2Z259 Zinc-finger homeodomain protein 11.9e-1768.52Show/hide
Query:  RYRECLKNHAAKSGGHVLDGCGEFMPCGEDGTPDCFKCAACECHRSFHRRELEA
        RYRECLKNHA   GGH +DGCGEFM  GE+GT D  +CAAC CHR+FHR+E E+
Subjt:  RYRECLKNHAAKSGGHVLDGCGEFMPCGEDGTPDCFKCAACECHRSFHRRELEA

Q9FRL5 Zinc-finger homeodomain protein 55.1e-1863.93Show/hide
Query:  ATAPSSPVRYRECLKNHAAKSGGHVLDGCGEFMPCGEDGTPDCFKCAACECHRSFHRRELE
        + A    VRYRECLKNHAA  GG V DGCGEFMP GE+GT +  +CAAC+CHR+FHR+E++
Subjt:  ATAPSSPVRYRECLKNHAAKSGGHVLDGCGEFMPCGEDGTPDCFKCAACECHRSFHRRELE

Q9M9S0 Zinc-finger homeodomain protein 41.5e-1760.34Show/hide
Query:  VRYRECLKNHAAKSGGHVLDGCGEFMPCGEDGTPDCFKCAACECHRSFHRRELEADIA
        ++Y+ECLKNHAA  GG+  DGCGEFMP GEDG+ +   C+AC CHR+FHR+E+E ++A
Subjt:  VRYRECLKNHAAKSGGHVLDGCGEFMPCGEDGTPDCFKCAACECHRSFHRRELEADIA

Q9SB61 Zinc-finger homeodomain protein 21.8e-1870.91Show/hide
Query:  VRYRECLKNHAAKSGGHVLDGCGEFMPCGEDGTPDCFKCAACECHRSFHRRELEA
        +RYRECLKNHA   GGH +DGC EFMP GEDGT D  KCAAC CHR+FHR+E E+
Subjt:  VRYRECLKNHAAKSGGHVLDGCGEFMPCGEDGTPDCFKCAACECHRSFHRRELEA

Q9ZPW7 Zinc-finger homeodomain protein 61.3e-1845.83Show/hide
Query:  TSSSAQTLDQTHL-PFQYSL-----RPRRDHVPLNPDPVPATATPPVAAT-APSS----------PVRYRECLKNHAAKSGGHVLDGCGEFMPCGEDGTP
        T   +  LD   L P+ YS      +P       +PDP P   T P++ + AP S            RYREC KNHAA SGGHV+DGCGEFM  GE+GT 
Subjt:  TSSSAQTLDQTHL-PFQYSL-----RPRRDHVPLNPDPVPATATPPVAAT-APSS----------PVRYRECLKNHAAKSGGHVLDGCGEFMPCGEDGTP

Query:  DCFKCAACECHRSFHRRELE
        +   CAAC+CHRSFHR+E++
Subjt:  DCFKCAACECHRSFHRRELE

Arabidopsis top hitse value%identityAlignment
AT1G14440.1 homeobox protein 311.1e-1860.34Show/hide
Query:  VRYRECLKNHAAKSGGHVLDGCGEFMPCGEDGTPDCFKCAACECHRSFHRRELEADIA
        ++Y+ECLKNHAA  GG+  DGCGEFMP GEDG+ +   C+AC CHR+FHR+E+E ++A
Subjt:  VRYRECLKNHAAKSGGHVLDGCGEFMPCGEDGTPDCFKCAACECHRSFHRRELEADIA

AT1G14440.2 homeobox protein 311.1e-1860.34Show/hide
Query:  VRYRECLKNHAAKSGGHVLDGCGEFMPCGEDGTPDCFKCAACECHRSFHRRELEADIA
        ++Y+ECLKNHAA  GG+  DGCGEFMP GEDG+ +   C+AC CHR+FHR+E+E ++A
Subjt:  VRYRECLKNHAAKSGGHVLDGCGEFMPCGEDGTPDCFKCAACECHRSFHRRELEADIA

AT1G75240.1 homeobox protein 333.6e-1963.93Show/hide
Query:  ATAPSSPVRYRECLKNHAAKSGGHVLDGCGEFMPCGEDGTPDCFKCAACECHRSFHRRELE
        + A    VRYRECLKNHAA  GG V DGCGEFMP GE+GT +  +CAAC+CHR+FHR+E++
Subjt:  ATAPSSPVRYRECLKNHAAKSGGHVLDGCGEFMPCGEDGTPDCFKCAACECHRSFHRRELE

AT2G18350.1 homeobox protein 249.6e-2045.83Show/hide
Query:  TSSSAQTLDQTHL-PFQYSL-----RPRRDHVPLNPDPVPATATPPVAAT-APSS----------PVRYRECLKNHAAKSGGHVLDGCGEFMPCGEDGTP
        T   +  LD   L P+ YS      +P       +PDP P   T P++ + AP S            RYREC KNHAA SGGHV+DGCGEFM  GE+GT 
Subjt:  TSSSAQTLDQTHL-PFQYSL-----RPRRDHVPLNPDPVPATATPPVAAT-APSS----------PVRYRECLKNHAAKSGGHVLDGCGEFMPCGEDGTP

Query:  DCFKCAACECHRSFHRRELE
        +   CAAC+CHRSFHR+E++
Subjt:  DCFKCAACECHRSFHRRELE

AT4G24660.1 homeobox protein 221.2e-1970.91Show/hide
Query:  VRYRECLKNHAAKSGGHVLDGCGEFMPCGEDGTPDCFKCAACECHRSFHRRELEA
        +RYRECLKNHA   GGH +DGC EFMP GEDGT D  KCAAC CHR+FHR+E E+
Subjt:  VRYRECLKNHAAKSGGHVLDGCGEFMPCGEDGTPDCFKCAACECHRSFHRRELEA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACTAAGAGACCCACAGCAAACGACACATCATCAAACCTTCGCCCATGGCACCTCAAGCTCCGCCCAAACCCTAGACCAGACTCACCTTCCTTTCCAGTATTCCCT
CAGACCCAGAAGAGATCATGTTCCTCTGAATCCAGATCCGGTGCCGGCGACGGCCACACCACCAGTCGCCGCCACTGCGCCCTCGTCTCCGGTTCGATATCGTGAATGTT
TGAAGAACCACGCCGCCAAGAGCGGCGGCCACGTGCTCGACGGCTGCGGAGAGTTCATGCCGTGTGGAGAAGATGGTACTCCGGATTGCTTCAAGTGCGCCGCCTGCGAA
TGCCACCGGAGTTTTCACCGGAGAGAATTAGAAGCGGATATAGCAAACGCCCGGCTTCAACGGATAAATTACGACGAAGACCTTCAAGCACTGCAATCGCTTCTGCTTCT
AATGGAGAAGAGCAAACCTTCATGTTCAAAGAATTCACGAGACGAAGACCTTCAAGCATTGCAATCGCTTCTGCTTCTAATGGAGAAGAGCAAACTTGAGCACATGAACT
CTGAGTTGCCTGAAGATACCCAGATTAATCTCGAATTACTAGGCCAACTCCACTACACCACCACCATATTCCCATATCAATCGCAACAACAGCCACTACCCTCCGCCGAG
TCCTATACCAAGTCCTATTGCTCCGGTGATGATGGCGTTCGGTGGCGGTTCGACCGAAGCCCCAGCAGAGTCGTCGAGCGACGGCGCAGAAGCATCAGGGCAGCGGAAGA
AGCGGTTCAGGACCAAGTTCAGCGGAGAACAGAAGGCCAAGATGTTGGAGTTCGCCAAGAAGCTCGGATGGAAGATACAGAAGCAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAACTAAGAGACCCACAGCAAACGACACATCATCAAACCTTCGCCCATGGCACCTCAAGCTCCGCCCAAACCCTAGACCAGACTCACCTTCCTTTCCAGTATTCCCT
CAGACCCAGAAGAGATCATGTTCCTCTGAATCCAGATCCGGTGCCGGCGACGGCCACACCACCAGTCGCCGCCACTGCGCCCTCGTCTCCGGTTCGATATCGTGAATGTT
TGAAGAACCACGCCGCCAAGAGCGGCGGCCACGTGCTCGACGGCTGCGGAGAGTTCATGCCGTGTGGAGAAGATGGTACTCCGGATTGCTTCAAGTGCGCCGCCTGCGAA
TGCCACCGGAGTTTTCACCGGAGAGAATTAGAAGCGGATATAGCAAACGCCCGGCTTCAACGGATAAATTACGACGAAGACCTTCAAGCACTGCAATCGCTTCTGCTTCT
AATGGAGAAGAGCAAACCTTCATGTTCAAAGAATTCACGAGACGAAGACCTTCAAGCATTGCAATCGCTTCTGCTTCTAATGGAGAAGAGCAAACTTGAGCACATGAACT
CTGAGTTGCCTGAAGATACCCAGATTAATCTCGAATTACTAGGCCAACTCCACTACACCACCACCATATTCCCATATCAATCGCAACAACAGCCACTACCCTCCGCCGAG
TCCTATACCAAGTCCTATTGCTCCGGTGATGATGGCGTTCGGTGGCGGTTCGACCGAAGCCCCAGCAGAGTCGTCGAGCGACGGCGCAGAAGCATCAGGGCAGCGGAAGA
AGCGGTTCAGGACCAAGTTCAGCGGAGAACAGAAGGCCAAGATGTTGGAGTTCGCCAAGAAGCTCGGATGGAAGATACAGAAGCAAGATGA
Protein sequenceShow/hide protein sequence
MELRDPQQTTHHQTFAHGTSSSAQTLDQTHLPFQYSLRPRRDHVPLNPDPVPATATPPVAATAPSSPVRYRECLKNHAAKSGGHVLDGCGEFMPCGEDGTPDCFKCAACE
CHRSFHRRELEADIANARLQRINYDEDLQALQSLLLLMEKSKPSCSKNSRDEDLQALQSLLLLMEKSKLEHMNSELPEDTQINLELLGQLHYTTTIFPYQSQQQPLPSAE
SYTKSYCSGDDGVRWRFDRSPSRVVERRRRSIRAAEEAVQDQVQRRTEGQDVGVRQEARMEDTEAR